RNA–Protein interactions for RNA: ENST00000215838.7

TCN2-201, Transcript of transcobalamin 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TCN2, Length 2,535 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCN2-201ENST00000215838 CUX1P39880 1505 aa16.04■□□□□ 0.16
TCN2-201ENST00000215838 URB2Q14146 1524 aaKnown RBP16.04■□□□□ 0.16
TCN2-201ENST00000215838 TOPBP1Q92547 1522 aa16.03■□□□□ 0.16
TCN2-201ENST00000215838 SYNJ1O43426 1573 aa16.02■□□□□ 0.16
TCN2-201ENST00000215838 RUSC2Q8N2Y8 1516 aa16.02■□□□□ 0.16
TCN2-201ENST00000215838 DHX57Q6P158 1386 aaKnown RBP16.01■□□□□ 0.15
TCN2-201ENST00000215838 TRIM52Q96A61 297 aa16.01■□□□□ 0.15
TCN2-201ENST00000215838 MYT1LQ9UL68 1186 aa16.01■□□□□ 0.15
TCN2-201ENST00000215838 NBR1Q14596 966 aa15.96■□□□□ 0.15
TCN2-201ENST00000215838 CDK11AQ9UQ88 783 aaPredicted RBP15.95■□□□□ 0.14
TCN2-201ENST00000215838 IRX6P78412 446 aaPredicted RBP15.93■□□□□ 0.14
TCN2-201ENST00000215838 EEA1Q15075 1411 aa15.93■□□□□ 0.14
TCN2-201ENST00000215838 CUX2O14529 1486 aa15.92■□□□□ 0.14
TCN2-201ENST00000215838 FGD5Q6ZNL6 1462 aa15.91■□□□□ 0.14
TCN2-201ENST00000215838 DDX10Q13206 875 aaKnown RBP15.91■□□□□ 0.14
TCN2-201ENST00000215838 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.91■□□□□ 0.14
TCN2-201ENST00000215838 POLA1P09884 1462 aaPredicted RBP15.9■□□□□ 0.14
TCN2-201ENST00000215838 IL27Q8NEV9 243 aa15.9■□□□□ 0.14
TCN2-201ENST00000215838 RTN4Q9NQC3 1192 aaKnown RBP15.9■□□□□ 0.14
TCN2-201ENST00000215838 WDR97A6NE52 1622 aa15.88■□□□□ 0.13
TCN2-201ENST00000215838 GOLGA3Q08378 1498 aa15.88■□□□□ 0.13
TCN2-201ENST00000215838 ERICH6BQ5W0A0 696 aa15.88■□□□□ 0.13
TCN2-201ENST00000215838 IFT140Q96RY7 1462 aa15.86■□□□□ 0.13
TCN2-201ENST00000215838 TARBP1Q13395 1621 aaKnown RBP15.86■□□□□ 0.13
TCN2-201ENST00000215838 PAK3O75914 559 aaPredicted RBP15.85■□□□□ 0.13
TCN2-201ENST00000215838 UBE2Q2Q8WVN8 375 aa15.85■□□□□ 0.13
TCN2-201ENST00000215838 ABCA10Q8WWZ4 1543 aa15.83■□□□□ 0.12
TCN2-201ENST00000215838 NOP58Q9Y2X3 529 aaKnown RBP15.81■□□□□ 0.12
TCN2-201ENST00000215838 CLIP1P30622 1438 aa15.79■□□□□ 0.12
TCN2-201ENST00000215838 RAD54L2Q9Y4B4 1467 aa15.77■□□□□ 0.11
TCN2-201ENST00000215838 ABCA5Q8WWZ7 1642 aa15.76■□□□□ 0.11
TCN2-201ENST00000215838 RANGAP1P46060 587 aaPredicted RBP15.75■□□□□ 0.11
TCN2-201ENST00000215838 VPS8Q8N3P4 1428 aa15.75■□□□□ 0.11
TCN2-201ENST00000215838 PPP1R15AO75807 674 aaPredicted RBP15.75■□□□□ 0.11
TCN2-201ENST00000215838 HIRIP3Q9BW71 556 aaPredicted RBP15.74■□□□□ 0.11
TCN2-201ENST00000215838 KIF21BO75037 1637 aa15.73■□□□□ 0.11
TCN2-201ENST00000215838 CCER2I3L3R5 266 aa15.71■□□□□ 0.11
TCN2-201ENST00000215838 KIF27Q86VH2 1401 aa15.71■□□□□ 0.11
TCN2-201ENST00000215838 EIF4G3O43432 1585 aaKnown RBP15.71■□□□□ 0.11
TCN2-201ENST00000215838 PBRM1Q86U86 1689 aa15.69■□□□□ 0.1
TCN2-201ENST00000215838 ANP32CO43423 234 aa15.69■□□□□ 0.1
TCN2-201ENST00000215838 B4GALNT3Q6L9W6 998 aa15.68■□□□□ 0.1
TCN2-201ENST00000215838 RAPGEF2Q9Y4G8 1499 aa15.67■□□□□ 0.1
TCN2-201ENST00000215838 RTL5Q5HYW3 569 aaPredicted RBP15.67■□□□□ 0.1
TCN2-201ENST00000215838 ERICH3Q5RHP9 1530 aa15.67■□□□□ 0.1
TCN2-201ENST00000215838 GAPVD1Q14C86 1478 aa15.66■□□□□ 0.1
TCN2-201ENST00000215838 HNRNPUQ00839 825 aaKnown RBP eCLIP15.66■□□□□ 0.1
TCN2-201ENST00000215838 ZNF608Q9ULD9 1512 aaPredicted RBP15.66■□□□□ 0.1
TCN2-201ENST00000215838 PPP4R2Q9NY27 417 aa15.65■□□□□ 0.1
TCN2-201ENST00000215838 CUL7Q14999 1698 aa15.64■□□□□ 0.09
TCN2-201ENST00000215838 GRIN2BQ13224 1484 aa15.63■□□□□ 0.09
TCN2-201ENST00000215838 KANK4Q5T7N3 995 aaPredicted RBP15.61■□□□□ 0.09
TCN2-201ENST00000215838 TDRD9Q8NDG6 1382 aaKnown RBP15.61■□□□□ 0.09
TCN2-201ENST00000215838 MAPKBP1O60336 1514 aa15.6■□□□□ 0.09
TCN2-201ENST00000215838 AQRO60306 1485 aaKnown RBP eCLIP15.6■□□□□ 0.09
TCN2-201ENST00000215838 SIN3AQ96ST3 1273 aa15.59■□□□□ 0.09
TCN2-201ENST00000215838 MAGI1Q96QZ7 1491 aaPredicted RBP15.59■□□□□ 0.09
TCN2-201ENST00000215838 ADAMTS12P58397 1594 aa15.58■□□□□ 0.08
TCN2-201ENST00000215838 EIF5BO60841 1220 aaKnown RBP15.58■□□□□ 0.08
TCN2-201ENST00000215838 IPO9Q96P70 1041 aaKnown RBP15.56■□□□□ 0.08
TCN2-201ENST00000215838 IGF1RP08069 1367 aa15.55■□□□□ 0.08
TCN2-201ENST00000215838 ZBTB47Q9UFB7 747 aaPredicted RBP15.53■□□□□ 0.08
TCN2-201ENST00000215838 SNAPC4Q5SXM2 1469 aa15.53■□□□□ 0.08
TCN2-201ENST00000215838 PRXQ9BXM0 1461 aa15.53■□□□□ 0.08
TCN2-201ENST00000215838 FHAD1B1AJZ9 1412 aa15.52■□□□□ 0.08
TCN2-201ENST00000215838 RAB3GAP2Q9H2M9 1393 aa15.52■□□□□ 0.08
TCN2-201ENST00000215838 ANP32AP39687 249 aaKnown RBP15.52■□□□□ 0.07
TCN2-201ENST00000215838 WASHC2AQ641Q2 1341 aa15.51■□□□□ 0.07
TCN2-201ENST00000215838 RRBP1Q9P2E9 1410 aaKnown RBP15.51■□□□□ 0.07
TCN2-201ENST00000215838 BRPF3Q9ULD4 1205 aa15.5■□□□□ 0.07
TCN2-201ENST00000215838 SYNJ2O15056 1496 aa15.5■□□□□ 0.07
TCN2-201ENST00000215838 PKNOX2Q96KN3 472 aa15.48■□□□□ 0.07
TCN2-201ENST00000215838 CARMIL1Q5VZK9 1371 aa15.47■□□□□ 0.07
TCN2-201ENST00000215838 LAS1LQ9Y4W2 734 aaKnown RBP15.47■□□□□ 0.07
TCN2-201ENST00000215838 ARAP1Q96P48 1450 aa15.46■□□□□ 0.07
TCN2-201ENST00000215838 CCNB3Q8WWL7 1395 aa15.46■□□□□ 0.06
TCN2-201ENST00000215838 NEFMP07197 916 aa15.45■□□□□ 0.06
TCN2-201ENST00000215838 CHD1O14646 1710 aa15.44■□□□□ 0.06
TCN2-201ENST00000215838 C11orf95C9JLR9 678 aaPredicted RBP15.43■□□□□ 0.06
TCN2-201ENST00000215838 GRIN2AQ12879 1464 aa15.43■□□□□ 0.06
TCN2-201ENST00000215838 WASHC2CQ9Y4E1 1318 aa15.42■□□□□ 0.06
TCN2-201ENST00000215838 CCDC184Q52MB2 194 aa15.41■□□□□ 0.06
TCN2-201ENST00000215838 TIMELESSQ9UNS1 1208 aa15.41■□□□□ 0.06
TCN2-201ENST00000215838 CTTNBP2Q8WZ74 1663 aa15.39■□□□□ 0.05
TCN2-201ENST00000215838 NPM2Q86SE8 214 aaKnown RBP15.39■□□□□ 0.05
TCN2-201ENST00000215838 NUP160Q12769 1436 aa15.37■□□□□ 0.05
TCN2-201ENST00000215838 CEP170Q5SW79 1584 aa15.34■□□□□ 0.05
TCN2-201ENST00000215838 FAM9BQ8IZU0 186 aa15.34■□□□□ 0.05
TCN2-201ENST00000215838 SETD5Q9C0A6 1442 aa15.33■□□□□ 0.05
TCN2-201ENST00000215838 CHMP7Q8WUX9 453 aaPredicted RBP15.33■□□□□ 0.04
TCN2-201ENST00000215838 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
TCN2-201ENST00000215838 CLASP1Q7Z460 1538 aa15.3■□□□□ 0.04
TCN2-201ENST00000215838 KIAA0586Q9BVV6 1533 aa15.3■□□□□ 0.04
TCN2-201ENST00000215838 ARHGAP35Q9NRY4 1499 aa15.29■□□□□ 0.04
TCN2-201ENST00000215838 AKNAQ7Z591 1439 aa15.29■□□□□ 0.04
TCN2-201ENST00000215838 IQGAP2Q13576 1575 aa15.29■□□□□ 0.04
TCN2-201ENST00000215838 GSE1Q14687 1217 aa15.27■□□□□ 0.03
TCN2-201ENST00000215838 ZBED9Q6R2W3 1325 aa15.26■□□□□ 0.03
TCN2-201ENST00000215838 SHROOM2Q13796 1616 aa15.26■□□□□ 0.03
TCN2-201ENST00000215838 UGGT2Q9NYU1 1516 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms