RNA–Protein interactions for RNA: ENST00000199448.8

EPDR1-201, Transcript of ependymin related 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EPDR1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPDR1-201ENST00000199448 HIRIP3Q9BW71 556 aaPredicted RBP29.59■■■□□ 2.33
EPDR1-201ENST00000199448 SETD5Q9C0A6 1442 aa29.57■■■□□ 2.32
EPDR1-201ENST00000199448 LRRC9Q6ZRR7 1453 aa29.57■■■□□ 2.32
EPDR1-201ENST00000199448 DDX10Q13206 875 aaKnown RBP29.57■■■□□ 2.32
EPDR1-201ENST00000199448 FGD5Q6ZNL6 1462 aa29.56■■■□□ 2.32
EPDR1-201ENST00000199448 WDR97A6NE52 1622 aa29.51■■■□□ 2.31
EPDR1-201ENST00000199448 CADPSQ9ULU8 1353 aa29.5■■■□□ 2.31
EPDR1-201ENST00000199448 MYT1Q01538 1121 aa29.46■■■□□ 2.31
EPDR1-201ENST00000199448 BCANQ96GW7 911 aa29.44■■■□□ 2.3
EPDR1-201ENST00000199448 FHOD3Q2V2M9 1422 aa29.43■■■□□ 2.3
EPDR1-201ENST00000199448 MAP3K1Q13233 1512 aa29.43■■■□□ 2.3
EPDR1-201ENST00000199448 TSHZ2Q9NRE2 1034 aa29.41■■■□□ 2.3
EPDR1-201ENST00000199448 PCF11O94913 1555 aaKnown RBP29.41■■■□□ 2.3
EPDR1-201ENST00000199448 RAD54L2Q9Y4B4 1467 aa29.37■■■□□ 2.29
EPDR1-201ENST00000199448 FHAD1B1AJZ9 1412 aa29.34■■■□□ 2.29
EPDR1-201ENST00000199448 PRDM2Q13029 1718 aa29.33■■■□□ 2.29
EPDR1-201ENST00000199448 PPP1R15AO75807 674 aaPredicted RBP29.33■■■□□ 2.29
EPDR1-201ENST00000199448 FKBP8Q14318 412 aa29.26■■■□□ 2.27
EPDR1-201ENST00000199448 CFAP43Q8NDM7 1665 aa29.25■■■□□ 2.27
EPDR1-201ENST00000199448 FANCD2Q9BXW9 1451 aa29.25■■■□□ 2.27
EPDR1-201ENST00000199448 TRIM52Q96A61 297 aa29.24■■■□□ 2.27
EPDR1-201ENST00000199448 PTPRKQ15262 1439 aa29.15■■■□□ 2.26
EPDR1-201ENST00000199448 POLA1P09884 1462 aaPredicted RBP29.15■■■□□ 2.26
EPDR1-201ENST00000199448 CASKIN1Q8WXD9 1431 aa29.15■■■□□ 2.26
EPDR1-201ENST00000199448 FYCO1Q9BQS8 1478 aa29.14■■■□□ 2.26
EPDR1-201ENST00000199448 NESP48681 1621 aa29.14■■■□□ 2.25
EPDR1-201ENST00000199448 FGD6Q6ZV73 1430 aa29.1■■■□□ 2.25
EPDR1-201ENST00000199448 TIMELESSQ9UNS1 1208 aa29.09■■■□□ 2.25
EPDR1-201ENST00000199448 ABCA10Q8WWZ4 1543 aa29.09■■■□□ 2.25
EPDR1-201ENST00000199448 CC2D2AQ9P2K1 1620 aa29.08■■■□□ 2.25
EPDR1-201ENST00000199448 TOPBP1Q92547 1522 aa29.08■■■□□ 2.25
EPDR1-201ENST00000199448 ANP32CO43423 234 aa29.08■■■□□ 2.24
EPDR1-201ENST00000199448 TONSLQ96HA7 1378 aa29.06■■■□□ 2.24
EPDR1-201ENST00000199448 MTUS2Q5JR59 1369 aa29.04■■■□□ 2.24
EPDR1-201ENST00000199448 CCDC18Q5T9S5 1454 aa29.04■■■□□ 2.24
EPDR1-201ENST00000199448 DNMBPQ6XZF7 1577 aa29.03■■■□□ 2.24
EPDR1-201ENST00000199448 TDRD9Q8NDG6 1382 aaKnown RBP29■■■□□ 2.23
EPDR1-201ENST00000199448 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP29■■■□□ 2.23
EPDR1-201ENST00000199448 EFCAB5A4FU69 1503 aa29■■■□□ 2.23
EPDR1-201ENST00000199448 SNAPC4Q5SXM2 1469 aa29■■■□□ 2.23
EPDR1-201ENST00000199448 AQRO60306 1485 aaKnown RBP eCLIP28.99■■■□□ 2.23
EPDR1-201ENST00000199448 CCER2I3L3R5 266 aa28.98■■■□□ 2.23
EPDR1-201ENST00000199448 FMN1Q68DA7 1419 aa28.96■■■□□ 2.23
EPDR1-201ENST00000199448 CHIC2Q9UKJ5 165 aa28.94■■■□□ 2.22
EPDR1-201ENST00000199448 HFM1A2PYH4 1435 aa28.93■■■□□ 2.22
EPDR1-201ENST00000199448 RRP7BPQ9NSQ0 103 aa28.92■■■□□ 2.22
EPDR1-201ENST00000199448 NAIPQ13075 1403 aa28.92■■■□□ 2.22
EPDR1-201ENST00000199448 UACAQ9BZF9 1416 aa28.92■■■□□ 2.22
EPDR1-201ENST00000199448 CTTNBP2Q8WZ74 1663 aa28.9■■■□□ 2.22
EPDR1-201ENST00000199448 NCOA2Q15596 1464 aa28.9■■■□□ 2.22
EPDR1-201ENST00000199448 PTPN23Q9H3S7 1636 aa28.9■■■□□ 2.22
EPDR1-201ENST00000199448 NEFLP07196 543 aa28.89■■■□□ 2.22
EPDR1-201ENST00000199448 LRRIQ1Q96JM4 1722 aa28.88■■■□□ 2.21
EPDR1-201ENST00000199448 CUL7Q14999 1698 aa28.86■■■□□ 2.21
EPDR1-201ENST00000199448 ANP32EQ9BTT0 268 aa28.86■■■□□ 2.21
EPDR1-201ENST00000199448 URB2Q14146 1524 aaKnown RBP28.85■■■□□ 2.21
EPDR1-201ENST00000199448 MYOM3Q5VTT5 1437 aa28.84■■■□□ 2.21
EPDR1-201ENST00000199448 ARID3CA6NKF2 412 aa28.84■■■□□ 2.21
EPDR1-201ENST00000199448 KDM5BQ9UGL1 1544 aa28.83■■■□□ 2.2
EPDR1-201ENST00000199448 IRX6P78412 446 aaPredicted RBP28.81■■■□□ 2.2
EPDR1-201ENST00000199448 DNAJC5BQ9UF47 199 aa28.81■■■□□ 2.2
EPDR1-201ENST00000199448 RBM19Q9Y4C8 960 aaKnown RBP28.8■■■□□ 2.2
EPDR1-201ENST00000199448 GRIN2BQ13224 1484 aa28.8■■■□□ 2.2
EPDR1-201ENST00000199448 HNRNPUQ00839 825 aaKnown RBP eCLIP28.78■■■□□ 2.2
EPDR1-201ENST00000199448 MAGI3Q5TCQ9 1506 aa28.77■■■□□ 2.2
EPDR1-201ENST00000199448 WASHC2AQ641Q2 1341 aa28.77■■■□□ 2.2
EPDR1-201ENST00000199448 FOXD1Q16676 465 aa28.77■■■□□ 2.2
EPDR1-201ENST00000199448 HSPA5P11021 654 aaKnown RBP28.76■■■□□ 2.2
EPDR1-201ENST00000199448 SAMD9Q5K651 1589 aa28.75■■■□□ 2.19
EPDR1-201ENST00000199448 GAPVD1Q14C86 1478 aa28.74■■■□□ 2.19
EPDR1-201ENST00000199448 DENND4BO75064 1496 aaPredicted RBP28.73■■■□□ 2.19
EPDR1-201ENST00000199448 CCDC184Q52MB2 194 aa28.72■■■□□ 2.19
EPDR1-201ENST00000199448 KDM6BO15054 1643 aa28.68■■■□□ 2.18
EPDR1-201ENST00000199448 ABCA5Q8WWZ7 1642 aa28.66■■■□□ 2.18
EPDR1-201ENST00000199448 C11orf95C9JLR9 678 aaPredicted RBP28.66■■■□□ 2.18
EPDR1-201ENST00000199448 SUPT6HQ7KZ85 1726 aaKnown RBP28.66■■■□□ 2.18
EPDR1-201ENST00000199448 UGGT2Q9NYU1 1516 aa28.65■■■□□ 2.18
EPDR1-201ENST00000199448 EHBP1L1Q8N3D4 1523 aa28.63■■■□□ 2.17
EPDR1-201ENST00000199448 L3MBTL2Q969R5 705 aa28.62■■■□□ 2.17
EPDR1-201ENST00000199448 MPHOSPH9Q99550 1183 aa28.6■■■□□ 2.17
EPDR1-201ENST00000199448 ARHGEF11O15085 1522 aa28.58■■■□□ 2.17
EPDR1-201ENST00000199448 EIF4G2P78344 907 aaKnown RBP eCLIP28.57■■■□□ 2.16
EPDR1-201ENST00000199448 CDK13Q14004 1512 aaKnown RBP28.56■■■□□ 2.16
EPDR1-201ENST00000199448 LAMC3Q9Y6N6 1575 aa28.55■■■□□ 2.16
EPDR1-201ENST00000199448 MSH5O43196 834 aa28.52■■■□□ 2.16
EPDR1-201ENST00000199448 THOC2Q8NI27 1593 aaKnown RBP28.51■■■□□ 2.15
EPDR1-201ENST00000199448 NBPF8Q3BBV2 869 aa28.51■■■□□ 2.15
EPDR1-201ENST00000199448 FAM9BQ8IZU0 186 aa28.5■■■□□ 2.15
EPDR1-201ENST00000199448 TCOF1Q13428 1488 aaKnown RBP28.5■■■□□ 2.15
EPDR1-201ENST00000199448 ZNF644Q9H582 1327 aaPredicted RBP28.48■■■□□ 2.15
EPDR1-201ENST00000199448 EPRSP07814 1512 aaKnown RBP28.48■■■□□ 2.15
EPDR1-201ENST00000199448 CNGB1Q14028 1251 aaPredicted RBP28.45■■■□□ 2.15
EPDR1-201ENST00000199448 PRKRIP1Q9H875 184 aaPredicted RBP28.44■■■□□ 2.14
EPDR1-201ENST00000199448 CNTLNQ9NXG0 1405 aa28.43■■■□□ 2.14
EPDR1-201ENST00000199448 HECW1Q76N89 1606 aa28.43■■■□□ 2.14
EPDR1-201ENST00000199448 GCC2Q8IWJ2 1684 aa28.43■■■□□ 2.14
EPDR1-201ENST00000199448 PDS5BQ9NTI5 1447 aa28.42■■■□□ 2.14
EPDR1-201ENST00000199448 CCDC7Q96M83 1385 aa28.41■■■□□ 2.14
EPDR1-201ENST00000199448 MRS2Q9HD23 443 aa28.39■■■□□ 2.14
EPDR1-201ENST00000199448 TARBP1Q13395 1621 aaKnown RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms