RNA–Protein interactions for RNA: ENST00000066544.7

CDC27-201, Transcript of cell division cycle 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CDC27, Length 5,801 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-201ENST00000066544 PHLDB1Q86UU1 1377 aa11.96□□□□□ -0.49
CDC27-201ENST00000066544 FHOD3Q2V2M9 1422 aa11.95□□□□□ -0.5
CDC27-201ENST00000066544 DDX10Q13206 875 aaKnown RBP11.94□□□□□ -0.5
CDC27-201ENST00000066544 FANCD2Q9BXW9 1451 aa11.92□□□□□ -0.5
CDC27-201ENST00000066544 NESP48681 1621 aa11.92□□□□□ -0.5
CDC27-201ENST00000066544 ARID3CA6NKF2 412 aa11.9□□□□□ -0.5
CDC27-201ENST00000066544 SETD5Q9C0A6 1442 aa11.9□□□□□ -0.5
CDC27-201ENST00000066544 LRRC9Q6ZRR7 1453 aa11.9□□□□□ -0.51
CDC27-201ENST00000066544 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
CDC27-201ENST00000066544 TIAM1Q13009 1591 aa11.89□□□□□ -0.51
CDC27-201ENST00000066544 TDRD9Q8NDG6 1382 aaKnown RBP11.89□□□□□ -0.51
CDC27-201ENST00000066544 CC2D2AQ9P2K1 1620 aa11.88□□□□□ -0.51
CDC27-201ENST00000066544 FHAD1B1AJZ9 1412 aa11.87□□□□□ -0.51
CDC27-201ENST00000066544 BCANQ96GW7 911 aa11.86□□□□□ -0.51
CDC27-201ENST00000066544 SUPT16HQ9Y5B9 1047 aaKnown RBP11.84□□□□□ -0.51
CDC27-201ENST00000066544 MAPKBP1O60336 1514 aa11.84□□□□□ -0.51
CDC27-201ENST00000066544 POLA1P09884 1462 aaPredicted RBP11.84□□□□□ -0.51
CDC27-201ENST00000066544 MTUS2Q5JR59 1369 aa11.83□□□□□ -0.51
CDC27-201ENST00000066544 PCF11O94913 1555 aaKnown RBP11.83□□□□□ -0.52
CDC27-201ENST00000066544 CHIC2Q9UKJ5 165 aa11.83□□□□□ -0.52
CDC27-201ENST00000066544 TOPBP1Q92547 1522 aa11.81□□□□□ -0.52
CDC27-201ENST00000066544 WDR97A6NE52 1622 aa11.8□□□□□ -0.52
CDC27-201ENST00000066544 TRIM52Q96A61 297 aa11.79□□□□□ -0.52
CDC27-201ENST00000066544 RRP7BPQ9NSQ0 103 aa11.79□□□□□ -0.52
CDC27-201ENST00000066544 PPP1R15AO75807 674 aaPredicted RBP11.78□□□□□ -0.52
CDC27-201ENST00000066544 TONSLQ96HA7 1378 aa11.77□□□□□ -0.52
CDC27-201ENST00000066544 PRDM2Q13029 1718 aa11.76□□□□□ -0.53
CDC27-201ENST00000066544 ABCA10Q8WWZ4 1543 aa11.76□□□□□ -0.53
CDC27-201ENST00000066544 DNMBPQ6XZF7 1577 aa11.76□□□□□ -0.53
CDC27-201ENST00000066544 MAP3K1Q13233 1512 aa11.75□□□□□ -0.53
CDC27-201ENST00000066544 CASKIN1Q8WXD9 1431 aa11.75□□□□□ -0.53
CDC27-201ENST00000066544 FGD6Q6ZV73 1430 aa11.74□□□□□ -0.53
CDC27-201ENST00000066544 FKBP8Q14318 412 aa11.73□□□□□ -0.53
CDC27-201ENST00000066544 ANP32CO43423 234 aa11.73□□□□□ -0.53
CDC27-201ENST00000066544 FMN1Q68DA7 1419 aa11.73□□□□□ -0.53
CDC27-201ENST00000066544 FYCO1Q9BQS8 1478 aa11.73□□□□□ -0.53
CDC27-201ENST00000066544 URB2Q14146 1524 aaKnown RBP11.72□□□□□ -0.53
CDC27-201ENST00000066544 PTPRKQ15262 1439 aa11.72□□□□□ -0.53
CDC27-201ENST00000066544 FOXD1Q16676 465 aa11.7□□□□□ -0.54
CDC27-201ENST00000066544 GAPVD1Q14C86 1478 aa11.7□□□□□ -0.54
CDC27-201ENST00000066544 CCDC18Q5T9S5 1454 aa11.7□□□□□ -0.54
CDC27-201ENST00000066544 CFAP43Q8NDM7 1665 aa11.69□□□□□ -0.54
CDC27-201ENST00000066544 CNGB1Q14028 1251 aaPredicted RBP11.68□□□□□ -0.54
CDC27-201ENST00000066544 EFCAB5A4FU69 1503 aa11.67□□□□□ -0.54
CDC27-201ENST00000066544 NCOA2Q15596 1464 aa11.67□□□□□ -0.54
CDC27-201ENST00000066544 TIMELESSQ9UNS1 1208 aa11.66□□□□□ -0.54
CDC27-201ENST00000066544 NEFLP07196 543 aa11.65□□□□□ -0.54
CDC27-201ENST00000066544 SNAPC4Q5SXM2 1469 aa11.65□□□□□ -0.54
CDC27-201ENST00000066544 AQRO60306 1485 aaKnown RBP eCLIP11.65□□□□□ -0.541e-7■■■■□ 23.9
CDC27-201ENST00000066544 TSHZ2Q9NRE2 1034 aa11.65□□□□□ -0.54
CDC27-201ENST00000066544 MYOM3Q5VTT5 1437 aa11.64□□□□□ -0.55
CDC27-201ENST00000066544 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
CDC27-201ENST00000066544 NAIPQ13075 1403 aa11.64□□□□□ -0.55
CDC27-201ENST00000066544 CUL7Q14999 1698 aa11.63□□□□□ -0.55
CDC27-201ENST00000066544 HFM1A2PYH4 1435 aa11.62□□□□□ -0.55
CDC27-201ENST00000066544 UACAQ9BZF9 1416 aa11.62□□□□□ -0.55
CDC27-201ENST00000066544 IRX6P78412 446 aaPredicted RBP11.62□□□□□ -0.55
CDC27-201ENST00000066544 CTTNBP2Q8WZ74 1663 aa11.61□□□□□ -0.55
CDC27-201ENST00000066544 HNRNPUQ00839 825 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDC27-201ENST00000066544 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
CDC27-201ENST00000066544 HSPA5P11021 654 aaKnown RBP11.61□□□□□ -0.55
CDC27-201ENST00000066544 FBLN2P98095 1184 aa11.6□□□□□ -0.55
CDC27-201ENST00000066544 POLR3GLQ9BT43 218 aa11.6□□□□□ -0.55
CDC27-201ENST00000066544 ZNF644Q9H582 1327 aaPredicted RBP11.59□□□□□ -0.55
CDC27-201ENST00000066544 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
CDC27-201ENST00000066544 GRIN2BQ13224 1484 aa11.59□□□□□ -0.55
CDC27-201ENST00000066544 CCER2I3L3R5 266 aa11.58□□□□□ -0.56
CDC27-201ENST00000066544 L3MBTL2Q969R5 705 aa11.58□□□□□ -0.56
CDC27-201ENST00000066544 MPHOSPH9Q99550 1183 aa11.58□□□□□ -0.56
CDC27-201ENST00000066544 PTPN23Q9H3S7 1636 aa11.58□□□□□ -0.56
CDC27-201ENST00000066544 ZNF326Q5BKZ1 582 aaKnown RBP11.58□□□□□ -0.56
CDC27-201ENST00000066544 LAMC3Q9Y6N6 1575 aa11.58□□□□□ -0.56
CDC27-201ENST00000066544 CDK13Q14004 1512 aaKnown RBP11.57□□□□□ -0.56
CDC27-201ENST00000066544 MAGI3Q5TCQ9 1506 aa11.57□□□□□ -0.56
CDC27-201ENST00000066544 EIF4G2P78344 907 aaKnown RBP eCLIP11.55□□□□□ -0.56
CDC27-201ENST00000066544 WASHC2AQ641Q2 1341 aa11.55□□□□□ -0.56
CDC27-201ENST00000066544 SENP3-EIF4A1A0A087X0R7 540 aa11.55□□□□□ -0.56
CDC27-201ENST00000066544 ABCA5Q8WWZ7 1642 aa11.55□□□□□ -0.56
CDC27-201ENST00000066544 FAM9BQ8IZU0 186 aa11.54□□□□□ -0.56
CDC27-201ENST00000066544 SLC4A1APQ9BWU0 796 aaKnown RBP11.54□□□□□ -0.56
CDC27-201ENST00000066544 LRRIQ1Q96JM4 1722 aa11.54□□□□□ -0.56
CDC27-201ENST00000066544 CCDC184Q52MB2 194 aa11.54□□□□□ -0.56
CDC27-201ENST00000066544 SAMD9Q5K651 1589 aa11.54□□□□□ -0.56
CDC27-201ENST00000066544 SUPT6HQ7KZ85 1726 aaKnown RBP11.53□□□□□ -0.56
CDC27-201ENST00000066544 EHBP1L1Q8N3D4 1523 aa11.53□□□□□ -0.56
CDC27-201ENST00000066544 KIF21AQ7Z4S6 1674 aa11.52□□□□□ -0.56
CDC27-201ENST00000066544 C11orf95C9JLR9 678 aaPredicted RBP11.52□□□□□ -0.56
CDC27-201ENST00000066544 EPRSP07814 1512 aaKnown RBP11.52□□□□□ -0.57
CDC27-201ENST00000066544 UGGT2Q9NYU1 1516 aa11.51□□□□□ -0.57
CDC27-201ENST00000066544 ZNF608Q9ULD9 1512 aaPredicted RBP11.51□□□□□ -0.57
CDC27-201ENST00000066544 NBPF8Q3BBV2 869 aa11.5□□□□□ -0.57
CDC27-201ENST00000066544 KDM6BO15054 1643 aa11.5□□□□□ -0.57
CDC27-201ENST00000066544 THOC2Q8NI27 1593 aaKnown RBP11.49□□□□□ -0.57
CDC27-201ENST00000066544 MYT1Q01538 1121 aa11.48□□□□□ -0.57
CDC27-201ENST00000066544 MRS2Q9HD23 443 aa11.48□□□□□ -0.57
CDC27-201ENST00000066544 CHMP7Q8WUX9 453 aaPredicted RBP11.48□□□□□ -0.57
CDC27-201ENST00000066544 CFDP1Q9UEE9 299 aaPredicted RBP11.48□□□□□ -0.57
CDC27-201ENST00000066544 IQGAP2Q13576 1575 aa11.48□□□□□ -0.57
CDC27-201ENST00000066544 CDK11AQ9UQ88 783 aaPredicted RBP11.47□□□□□ -0.57
CDC27-201ENST00000066544 DENND4BO75064 1496 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms