RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Zcchc6Q5BLK4 1491 aaKnown RBP12.26□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Plcb2A3KGF7 1181 aa12.26□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Plppr3Q7TPB0 716 aa12.25□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Trim26Q99PN3 545 aa12.25□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Trim30dE9PWL0 497 aa12.24□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Htatsf1Q8BGC0 757 aa12.22□□□□□ -0.45
Col6a5-201ENSMUST00000165165 Clstn1Q9EPL2 979 aa12.2□□□□□ -0.46
Col6a5-201ENSMUST00000165165 BccipQ9CWI3 316 aa12.19□□□□□ -0.46
Col6a5-201ENSMUST00000165165 SetQ9EQU5 289 aaKnown RBP12.18□□□□□ -0.46
Col6a5-201ENSMUST00000165165 Eid3Q3V124 375 aa12.17□□□□□ -0.46
Col6a5-201ENSMUST00000165165 Irx6Q9ER75 438 aa12.17□□□□□ -0.46
Col6a5-201ENSMUST00000165165 Casc1Q6TDU8 730 aa12.15□□□□□ -0.46
Col6a5-201ENSMUST00000165165 Ccdc27Q3V036 639 aa12.13□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Calcoco2A2A6M5 331 aa12.13□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Fam71e1A1L3C1 212 aa12.12□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Gm35339A0A140LHH9 1649 aa12.12□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Npm1Q61937 292 aaKnown RBP12.12□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Erich6bQ9D4S6 220 aa12.1□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Slc4a1apE9PX68 744 aa12.09□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Spryd3E9Q9B3 442 aa12.09□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Prm3Q62100 101 aa12.08□□□□□ -0.47
Col6a5-201ENSMUST00000165165 Pes1Q9EQ61 584 aaKnown RBP12.08□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Sall2Q9QX96 1004 aa12.07□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Noc3lQ8VI84 807 aaKnown RBP12.07□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Mrs2Q5NCE8 434 aa12.05□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Podxl2Q8CAE9 603 aa12.05□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Rtn4Q99P72 1162 aaKnown RBP12.05□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Fkbp15Q6P9Q6 1216 aaKnown RBP12.04□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Dcaf1Q80TR8 1506 aa12.04□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Pcmtd1P59913 357 aa12.03□□□□□ -0.48
Col6a5-201ENSMUST00000165165 P3h3Q8CG70 732 aa12.03□□□□□ -0.48
Col6a5-201ENSMUST00000165165 MsnP26041 577 aaKnown RBP12.03□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Bcl11aQ9QYE3 773 aa12.03□□□□□ -0.48
Col6a5-201ENSMUST00000165165 Gm973E9Q295 1059 aa12.01□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Map7O88735 730 aa12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Safb2Q80YR5 991 aaKnown RBP12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Dnttip2Q8R2M2 758 aaKnown RBP12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 AU015836B2RUM3 263 aa12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Ppm1gQ61074 542 aa12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Irx3P81067 507 aa12□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Wwc2Q6NXJ0 1187 aa11.99□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Ccer2J3QPU5 274 aa11.98□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Sh3bp5Q9Z131 463 aa11.98□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Taok2Q6ZQ29 1240 aa11.97□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Apbb1Q9QXJ1 710 aa11.96□□□□□ -0.49
Col6a5-201ENSMUST00000165165 Cald1E9QA15 768 aaKnown RBP11.95□□□□□ -0.5
Col6a5-201ENSMUST00000165165 MccE9PWI3 1003 aa11.94□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Ftsj3Q9DBE9 838 aaKnown RBP11.94□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Anapc15P60007 132 aa11.94□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Gm6268A2A3U9 297 aa11.93□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Ofd1Q80Z25 1017 aa11.93□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Clip1Q922J3 1391 aa11.93□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Dbr1Q923B1 550 aa11.92□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Armcx1Q9CX83 456 aa11.92□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Map7d2A2AG50 781 aa11.91□□□□□ -0.5
Col6a5-201ENSMUST00000165165 RdxP26043 583 aaKnown RBP11.91□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Hsp90b1P08113 802 aaKnown RBP11.9□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Abcc8B2RUS7 1588 aa11.9□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Kiaa0754Q69ZZ9 979 aa11.9□□□□□ -0.5
Col6a5-201ENSMUST00000165165 Chmp4bQ9D8B3 224 aaKnown RBP11.9□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Tpm3-rs7D3Z2H9 248 aa11.88□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Neurod2Q62414 383 aa11.87□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Chic2Q9D9G3 165 aa11.87□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Isy1Q69ZQ2 285 aaKnown RBP11.87□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Mapk8ip3Q9ESN9 1337 aa11.86□□□□□ -0.51
Col6a5-201ENSMUST00000165165 IqubQ8CDK3 788 aa11.86□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Rrp12Q6P5B0 1295 aaKnown RBP11.85□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Rassf8Q8CJ96 419 aa11.85□□□□□ -0.51
Col6a5-201ENSMUST00000165165 KnstrnQ9D9Z1 312 aaKnown RBP11.85□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Cep164Q5DU05 1446 aa11.85□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Gpatch11Q3UFS4 262 aa11.84□□□□□ -0.51
Col6a5-201ENSMUST00000165165 B4galnt3Q6L8S8 986 aa11.84□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Clstn2Q9ER65 966 aa11.83□□□□□ -0.51
Col6a5-201ENSMUST00000165165 Exosc9Q9JHI7 438 aaKnown RBP11.83□□□□□ -0.51
Col6a5-201ENSMUST00000165165 PtmsQ9D0J8 101 aaKnown RBP11.83□□□□□ -0.52
Col6a5-201ENSMUST00000165165 1700019A02RikA0A087WPV9 146 aa11.81□□□□□ -0.52
Col6a5-201ENSMUST00000165165 1700123L14RikQ3V2K7 440 aa11.81□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Brd4Q9ESU6 1400 aaKnown RBP11.79□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Iqcf3Q9D498 203 aa11.79□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Rgl3Q3UYI5 709 aa11.78□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Becn1O88597 448 aa11.78□□□□□ -0.52
Col6a5-201ENSMUST00000165165 CgnP59242 1191 aa11.78□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Trim30aP15533 496 aa11.78□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Mical1Q8VDP3 1048 aa11.78□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Dnai2A2AC93 623 aa11.77□□□□□ -0.52
Col6a5-201ENSMUST00000165165 Tpm3P21107 285 aaKnown RBP11.77□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Arid4aF8VPQ2 1261 aaKnown RBP11.77□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Rb1cc1Q9ESK9 1588 aa11.77□□□□□ -0.53
Col6a5-201ENSMUST00000165165 NgefQ8CHT1 710 aa11.76□□□□□ -0.53
Col6a5-201ENSMUST00000165165 R3hcc1Q8BSI6 488 aa11.76□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Kdm2aP59997 1161 aa11.76□□□□□ -0.53
Col6a5-201ENSMUST00000165165 NudcO35685 332 aaKnown RBP11.75□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Iffo2Q8R2V2 512 aa11.74□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Eif4g2Q62448 906 aaKnown RBP11.74□□□□□ -0.53
Col6a5-201ENSMUST00000165165 BlmO88700 1416 aa11.73□□□□□ -0.53
Col6a5-201ENSMUST00000165165 CalrP14211 416 aaKnown RBP11.73□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Mbd3Q9Z2D8 285 aaKnown RBP11.72□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Dusp9Q7TNL7 452 aa11.72□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Srpk2O54781 681 aaKnown RBP11.72□□□□□ -0.53
Col6a5-201ENSMUST00000165165 Vps53Q8CCB4 832 aa11.72□□□□□ -0.53
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms