RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Hdac5Q9Z2V6 1113 aa12.53□□□□□ -0.4
Prpf40a-201ENSMUST00000076313 BlmO88700 1416 aa12.52□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 Gm13695A2AK44 830 aa12.5□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 Ythdc1E9Q5K9 736 aaKnown RBP12.48□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 DekQ7TNV0 380 aaKnown RBP12.47□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 Vsig10D3YX43 558 aa12.47□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 P3h3Q8CG70 732 aa12.46□□□□□ -0.41
Prpf40a-201ENSMUST00000076313 Lmod3E9QA62 571 aa12.45□□□□□ -0.42
Prpf40a-201ENSMUST00000076313 CatipB9EKE5 520 aa12.44□□□□□ -0.42
Prpf40a-201ENSMUST00000076313 CanxP35564 591 aaKnown RBP12.43□□□□□ -0.42
Prpf40a-201ENSMUST00000076313 Ccdc9Q8VC31 543 aaKnown RBP12.42□□□□□ -0.42
Prpf40a-201ENSMUST00000076313 Trim26Q99PN3 545 aa12.41□□□□□ -0.42
Prpf40a-201ENSMUST00000076313 Hsp90ab1P11499 724 aaKnown RBP12.39□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Trim30dE9PWL0 497 aa12.39□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Ofd1Q80Z25 1017 aa12.38□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Setd5Q5XJV7 1441 aa12.38□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Rgl3Q3UYI5 709 aa12.37□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Trim44Q9QXA7 346 aa12.36□□□□□ -0.43
Prpf40a-201ENSMUST00000076313 Arid4bA2CG63 1314 aaKnown RBP12.33□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 SafbD3YXK2 937 aaKnown RBP12.32□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 Fgd1P52734 960 aa12.32□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 Ccdc27Q3V036 639 aa12.31□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 Clstn2Q9ER65 966 aa12.3□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 Apbb1Q9QXJ1 710 aa12.3□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 Grwd1Q810D6 446 aaKnown RBP12.28□□□□□ -0.44
Prpf40a-201ENSMUST00000076313 PtmaP26350 111 aa12.24□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Bcl11aQ9QYE3 773 aa12.24□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Plcb2A3KGF7 1181 aa12.24□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Dbr1Q923B1 550 aa12.24□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Neurod2Q62414 383 aa12.23□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Kdm2aP59997 1161 aa12.22□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Card11Q8CIS0 1159 aa12.22□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Golga3P55937 1487 aa12.22□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Htatsf1Q8BGC0 757 aa12.22□□□□□ -0.45
Prpf40a-201ENSMUST00000076313 Eea1Q8BL66 1411 aa12.21□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Slc4a3P16283 1227 aa12.21□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Kif15Q6P9L6 1387 aa12.2□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Irx6Q9ER75 438 aa12.19□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 B4galnt3Q6L8S8 986 aa12.19□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 NacadQ5SWP3 1504 aa12.18□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Spryd3E9Q9B3 442 aa12.18□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Safb2Q80YR5 991 aaKnown RBP12.18□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Ppm1gQ61074 542 aa12.18□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Armcx1Q9CX83 456 aa12.17□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Cwc22Q8C5N3 908 aaKnown RBP12.16□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Baz1aO88379 1555 aa12.15□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Rsf1E9PWW9 1441 aaKnown RBP12.15□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Arhgap27A2AB59 869 aa12.15□□□□□ -0.46
Prpf40a-201ENSMUST00000076313 Wwc2Q6NXJ0 1187 aa12.14□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Mroh3A0A1D5RM54 893 aa12.14□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Hspa5P20029 655 aaKnown RBP12.12□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Irx3P81067 507 aa12.11□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 IqubQ8CDK3 788 aa12.11□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Srpk2O54781 681 aaKnown RBP12.11□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Gm20521D3Z5F7 333 aa12.11□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Exosc9Q9JHI7 438 aaKnown RBP12.09□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Gm6268A2A3U9 297 aa12.09□□□□□ -0.47
Prpf40a-201ENSMUST00000076313 Mapk8ip3Q9ESN9 1337 aa12.08□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Supt16hQ920B9 1047 aa12.07□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Map7O88735 730 aa12.07□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Mia2Q91ZV0 1396 aa12.06□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Tcerg1Q8CGF7 1100 aaKnown RBP12.05□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Rrp7aQ9D1C9 280 aaKnown RBP12.05□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Mtus2Q3UHD3 1353 aa12.04□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Rwdd1Q9CQK7 243 aa12.04□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Ccdc18Q640L5 1455 aa12.02□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Dnttip2Q8R2M2 758 aaKnown RBP12.02□□□□□ -0.48
Prpf40a-201ENSMUST00000076313 Sin3aQ60520 1274 aaKnown RBP12.02□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Stk24Q99KH8 431 aa12.02□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Cnga1P29974 684 aa12.02□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 1700019A02RikA0A087WPV9 146 aa12.01□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Stag3O70576 1240 aa12.01□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Casc1Q6TDU8 730 aa12.01□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Mbd3Q9Z2D8 285 aaKnown RBP12.01□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Exoc6Q8R313 802 aa12□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Ercc6F8VPZ5 1481 aa12□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 AU015836B2RUM3 263 aa11.99□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Chmp5Q9D7S9 219 aa11.99□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Rundc1Q0VDN7 615 aa11.98□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Erich6bQ9D4S6 220 aa11.98□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Dnai1Q8C0M8 701 aa11.98□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Ipo9Q91YE6 1041 aa11.98□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Chmp4bQ9D8B3 224 aaKnown RBP11.98□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 NgefQ8CHT1 710 aa11.97□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 KnstrnQ9D9Z1 312 aaKnown RBP11.97□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 NudcO35685 332 aaKnown RBP11.96□□□□□ -0.49
Prpf40a-201ENSMUST00000076313 Kdm5dQ62240 1548 aa11.96□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Hsp90b1P08113 802 aaKnown RBP11.95□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Speer4f1Q9D5Q6 258 aa11.95□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Rtn4Q99P72 1162 aaKnown RBP11.95□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Pkd2O35245 966 aa11.95□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 EspnQ9ET47 871 aa11.95□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Ccdc88bQ4QRL3 1481 aa11.94□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Ecm2Q5FW85 670 aa11.94□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Adam1bQ8R534 806 aa11.93□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 PnnO35691 725 aaKnown RBP11.93□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Znf326O88291 580 aa11.93□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Pes1Q9EQ61 584 aaKnown RBP11.93□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 Iqcf3Q9D498 203 aa11.92□□□□□ -0.5
Prpf40a-201ENSMUST00000076313 MyclP10166 368 aa11.91□□□□□ -0.5
Retrieved 100 of 22,080 RNA–protein pairs in 105.4 ms