RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Rsf1E9PWW9 1441 aaKnown RBP18.66■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Ercc6F8VPZ5 1481 aa18.64■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Kif15Q6P9L6 1387 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Setd5Q5XJV7 1441 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Polr3glQ8R0C0 218 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Clstn2Q9ER65 966 aa18.62■□□□□ 0.57
Col18a1-201ENSMUST00000072755 Irx3P81067 507 aa18.55■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Plppr3Q7TPB0 716 aa18.55■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Ccdc18Q640L5 1455 aa18.54■□□□□ 0.56
Col18a1-201ENSMUST00000072755 Kdm5dQ62240 1548 aa18.51■□□□□ 0.55
Col18a1-201ENSMUST00000072755 Ppp4r2Q0VGB7 417 aa18.5■□□□□ 0.55
Col18a1-201ENSMUST00000072755 Calr4Q3TQS0 420 aa18.44■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Upf2A2AT37 1269 aaKnown RBP18.43■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Eea1Q8BL66 1411 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Ccdc27Q3V036 639 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Lmod3E9QA62 571 aa18.41■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Taok2Q6ZQ29 1240 aa18.4■□□□□ 0.54
Col18a1-201ENSMUST00000072755 Safb2Q80YR5 991 aaKnown RBP18.39■□□□□ 0.53
Col18a1-201ENSMUST00000072755 Mrs2Q5NCE8 434 aa18.34■□□□□ 0.53
Col18a1-201ENSMUST00000072755 Arhgap27A2AB59 869 aa18.33■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Rad21Q61550 635 aaKnown RBP18.32■□□□□ 0.52
Col18a1-201ENSMUST00000072755 SafbD3YXK2 937 aaKnown RBP18.31■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Gtf3c3Q3TMP1 882 aa18.31■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Rgl3Q3UYI5 709 aa18.3■□□□□ 0.52
Col18a1-201ENSMUST00000072755 Wdr43Q6ZQL4 677 aaKnown RBP18.29■□□□□ 0.52
Col18a1-201ENSMUST00000072755 ArxO35085 564 aa18.26■□□□□ 0.51
Col18a1-201ENSMUST00000072755 P3h3Q8CG70 732 aa18.26■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Rangap1P46061 589 aaKnown RBP18.24■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Pds5bQ4VA53 1446 aaKnown RBP18.23■□□□□ 0.51
Col18a1-201ENSMUST00000072755 Mtus2Q3UHD3 1353 aa18.18■□□□□ 0.5
Col18a1-201ENSMUST00000072755 IqubQ8CDK3 788 aa18.17■□□□□ 0.5
Col18a1-201ENSMUST00000072755 Mia2Q91ZV0 1396 aa18.13■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Srpk2O54781 681 aaKnown RBP18.13■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Mroh3A0A1D5RM54 893 aa18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Kdm2aP59997 1161 aa18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Rrp7aQ9D1C9 280 aaKnown RBP18.11■□□□□ 0.49
Col18a1-201ENSMUST00000072755 CatipB9EKE5 520 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Grwd1Q810D6 446 aaKnown RBP18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Card11Q8CIS0 1159 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Fmn1Q05860 1466 aa18.1■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Fgd1P52734 960 aa18.09■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Cwc22Q8C5N3 908 aaKnown RBP18.08■□□□□ 0.49
Col18a1-201ENSMUST00000072755 Rtn4Q99P72 1162 aaKnown RBP18.07■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Plcd4Q8K3R3 807 aa18.07■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Tnnt2P50752 301 aa18.06■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Gm20521D3Z5F7 333 aa18.05■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Aebp2Q9Z248 504 aaKnown RBP18.04■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Sycp2Q9CUU3 1500 aa18.04■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Trim26Q99PN3 545 aa18.03■□□□□ 0.48
Col18a1-201ENSMUST00000072755 Exosc9Q9JHI7 438 aaKnown RBP18.01■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Ofd1Q80Z25 1017 aa18.01■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Kif27Q7M6Z4 1394 aa18■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Ccdc88bQ4QRL3 1481 aa17.99■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Cep162Q6ZQ06 1403 aa17.99■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Trim44Q9QXA7 346 aa17.98■□□□□ 0.47
Col18a1-201ENSMUST00000072755 AU015836B2RUM3 263 aa17.97■□□□□ 0.47
Col18a1-201ENSMUST00000072755 Stk24Q99KH8 431 aa17.95■□□□□ 0.46
Col18a1-201ENSMUST00000072755 BccipQ9CWI3 316 aa17.94■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Znf326O88291 580 aa17.93■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Crybg2B7ZCC2 1516 aa17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 CanxP35564 591 aaKnown RBP17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Stag3O70576 1240 aa17.92■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Mapk8ip3Q9ESN9 1337 aa17.9■□□□□ 0.46
Col18a1-201ENSMUST00000072755 Aebp1Q640N1 1128 aa17.88■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Fyco1Q8VDC1 1437 aa17.87■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Rpap1Q80TE0 1409 aa17.86■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Irx6Q9ER75 438 aa17.86■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Znf316Q6PGE4 1016 aa17.85■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Hsp90ab1P11499 724 aaKnown RBP17.85■□□□□ 0.45
Col18a1-201ENSMUST00000072755 CftrP26361 1476 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Map4P27546 1125 aaKnown RBP17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 Trim30dE9PWL0 497 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 AknaQ80VW7 1404 aa17.84■□□□□ 0.45
Col18a1-201ENSMUST00000072755 DekQ7TNV0 380 aaKnown RBP17.83■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Hspa5P20029 655 aaKnown RBP17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Baz1bQ9Z277 1479 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Supt16hQ920B9 1047 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Podxl2Q8CAE9 603 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Cux2P70298 1426 aa17.82■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Neurod2Q62414 383 aa17.81■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Zfp777B9EKF4 885 aa17.81■□□□□ 0.44
Col18a1-201ENSMUST00000072755 CntlnA2AM05 1397 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 MyclP10166 368 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Arhgap35Q91YM2 1499 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 IbspQ61711 324 aa17.8■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Pkd2O35245 966 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Iqcf3Q9D498 203 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Ppp1r18Q8BQ30 594 aa17.79■□□□□ 0.44
Col18a1-201ENSMUST00000072755 NgefQ8CHT1 710 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Apbb1Q9QXJ1 710 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Vsig10D3YX43 558 aa17.78■□□□□ 0.44
Col18a1-201ENSMUST00000072755 Gtf3c5Q8R2T8 520 aa17.76■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Chmp4bQ9D8B3 224 aaKnown RBP17.76■□□□□ 0.43
Col18a1-201ENSMUST00000072755 NudcO35685 332 aaKnown RBP17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Phldb1Q6PDH0 1371 aaKnown RBP17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Fhad1A6PWD2 1420 aa17.75■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Dhx57Q6P5D3 1388 aaKnown RBP17.74■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Smarca2Q6DIC0 1577 aa17.74■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Dnttip2Q8R2M2 758 aaKnown RBP17.73■□□□□ 0.43
Col18a1-201ENSMUST00000072755 Cnga1P29974 684 aa17.73■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 13 ms