RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Rhox8Q6VSS7 320 aa24.49■■□□□ 1.51
Col18a1-201ENSMUST00000072755 Rpgrip1Q9EPQ2 1331 aa22.57■■□□□ 1.2
Col18a1-201ENSMUST00000072755 Las1lA2BE28 776 aaKnown RBP22.2■■□□□ 1.15
Col18a1-201ENSMUST00000072755 NischQ80TM9 1593 aa21.86■■□□□ 1.09
Col18a1-201ENSMUST00000072755 Ccdc136Q3TVA9 1136 aa21.77■■□□□ 1.07
Col18a1-201ENSMUST00000072755 Esf1Q3V1V3 845 aaKnown RBP21.7■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Ehmt2Q9Z148 1263 aaKnown RBP21.66■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Cngb1E1AZ71 1325 aa21.65■■□□□ 1.06
Col18a1-201ENSMUST00000072755 Trim41Q5NCC3 630 aa21.43■■□□□ 1.02
Col18a1-201ENSMUST00000072755 Amer1Q7TS75 1132 aa21.32■■□□□ 1
Col18a1-201ENSMUST00000072755 Gab3Q8BSM5 595 aa21.24■□□□□ 0.99
Col18a1-201ENSMUST00000072755 Zeb1Q64318 1117 aa21.22■□□□□ 0.99
Col18a1-201ENSMUST00000072755 Npm2Q80W85 207 aa21.18■□□□□ 0.98
Col18a1-201ENSMUST00000072755 CenpbP27790 599 aa21.18■□□□□ 0.98
Col18a1-201ENSMUST00000072755 Myt1Q8CFC2 1127 aa21.15■□□□□ 0.98
Col18a1-201ENSMUST00000072755 DiexfQ8BTT6 772 aaKnown RBP21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Ube2uB1AUC4 352 aa21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Wdr66E9Q743 1299 aa21.11■□□□□ 0.97
Col18a1-201ENSMUST00000072755 Pelp1Q9DBD5 1123 aaKnown RBP21.02■□□□□ 0.96
Col18a1-201ENSMUST00000072755 Myt1lP97500 1187 aa20.94■□□□□ 0.94
Col18a1-201ENSMUST00000072755 Pcgf6Q99NA9 353 aa20.77■□□□□ 0.91
Col18a1-201ENSMUST00000072755 Acin1Q9JIX8 1338 aaKnown RBP20.74■□□□□ 0.91
Col18a1-201ENSMUST00000072755 Ccdc180J3QNE4 1664 aa20.61■□□□□ 0.89
Col18a1-201ENSMUST00000072755 Rtl1Q7M732 1744 aa20.49■□□□□ 0.87
Col18a1-201ENSMUST00000072755 UbtfP25976 765 aaKnown RBP20.44■□□□□ 0.86
Col18a1-201ENSMUST00000072755 NefmP08553 848 aa20.43■□□□□ 0.86
Col18a1-201ENSMUST00000072755 Ttbk1Q6PCN3 1308 aa20.41■□□□□ 0.86
Col18a1-201ENSMUST00000072755 Abcc9P70170 1546 aa20.39■□□□□ 0.85
Col18a1-201ENSMUST00000072755 HrcG5E8J6 738 aa20.39■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Zcchc6Q5BLK4 1491 aaKnown RBP20.35■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Il27Q8K3I6 234 aa20.33■□□□□ 0.85
Col18a1-201ENSMUST00000072755 Gm35339A0A140LHH9 1649 aa20.14■□□□□ 0.81
Col18a1-201ENSMUST00000072755 Stra8P70278 393 aa20.12■□□□□ 0.81
Col18a1-201ENSMUST00000072755 Supt5hO55201 1082 aaKnown RBP20.07■□□□□ 0.8
Col18a1-201ENSMUST00000072755 Cdk11bP24788 784 aaKnown RBP19.94■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Ap3b1Q9Z1T1 1105 aa19.94■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Neurod1Q60867 357 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Slc24a1Q91WD8 1130 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Abcc8B2RUS7 1588 aa19.92■□□□□ 0.78
Col18a1-201ENSMUST00000072755 Fam50aQ9WV03 339 aaKnown RBP19.88■□□□□ 0.77
Col18a1-201ENSMUST00000072755 4933416C03RikQ3V063 378 aa19.84■□□□□ 0.77
Col18a1-201ENSMUST00000072755 Bcl11aQ9QYE3 773 aa19.75■□□□□ 0.75
Col18a1-201ENSMUST00000072755 4930567H17RikQ3V0K5 233 aa19.72■□□□□ 0.75
Col18a1-201ENSMUST00000072755 Csrnp3P59055 597 aa19.7■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Anp32bQ9EST5 272 aaKnown RBP19.69■□□□□ 0.74
Col18a1-201ENSMUST00000072755 NclP09405 707 aaKnown RBP19.69■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Nop58Q6DFW4 536 aaKnown RBP19.67■□□□□ 0.74
Col18a1-201ENSMUST00000072755 Rtl5Q5DTT4 599 aa19.65■□□□□ 0.74
Col18a1-201ENSMUST00000072755 NrdcQ8BHG1 1161 aa19.64■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Gm38655A0A286YDK6 273 aa19.63■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Npm1Q61937 292 aaKnown RBP19.63■□□□□ 0.73
Col18a1-201ENSMUST00000072755 Os9Q8K2C7 672 aa19.6■□□□□ 0.73
Col18a1-201ENSMUST00000072755 TonslQ6NZL6 1363 aa19.54■□□□□ 0.72
Col18a1-201ENSMUST00000072755 Tnnt3Q9QZ47 272 aa19.51■□□□□ 0.71
Col18a1-201ENSMUST00000072755 1700123L14RikQ3V2K7 440 aa19.48■□□□□ 0.71
Col18a1-201ENSMUST00000072755 Aplp2Q06335 707 aa19.46■□□□□ 0.71
Col18a1-201ENSMUST00000072755 Brd4Q9ESU6 1400 aaKnown RBP19.43■□□□□ 0.7
Col18a1-201ENSMUST00000072755 Mier1Q5UAK0 511 aa19.43■□□□□ 0.7
Col18a1-201ENSMUST00000072755 NeflP08551 543 aa19.4■□□□□ 0.7
Col18a1-201ENSMUST00000072755 Anks4bQ8K3X6 423 aa19.39■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Lmod2Q3UHZ5 550 aa19.38■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Ppargc1bQ8VHJ7 1014 aa19.34■□□□□ 0.69
Col18a1-201ENSMUST00000072755 Eif5bQ05D44 1216 aaKnown RBP19.33■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Plekhg3Q4VAC9 1341 aa19.33■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Rb1cc1Q9ESK9 1588 aa19.29■□□□□ 0.68
Col18a1-201ENSMUST00000072755 Anp32aO35381 247 aa19.24■□□□□ 0.67
Col18a1-201ENSMUST00000072755 Zbtb7cQ8VCZ7 619 aa19.24■□□□□ 0.67
Col18a1-201ENSMUST00000072755 Hnrnpul2Q00PI9 745 aaKnown RBP19.19■□□□□ 0.66
Col18a1-201ENSMUST00000072755 Cep164Q5DU05 1446 aa19.14■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Ifnlr1Q8CGK5 535 aa19.11■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Gm13697A2AK42 830 aa19.11■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Clip1Q922J3 1391 aa19.1■□□□□ 0.65
Col18a1-201ENSMUST00000072755 DaxxO35613 739 aa19.1■□□□□ 0.65
Col18a1-201ENSMUST00000072755 Dcaf1Q80TR8 1506 aa19.09■□□□□ 0.65
Col18a1-201ENSMUST00000072755 ClspnQ80YR7 1315 aa19.07■□□□□ 0.64
Col18a1-201ENSMUST00000072755 Chic1Q8CBW7 227 aa19.04■□□□□ 0.64
Col18a1-201ENSMUST00000072755 Ubl4bQ9CQ84 188 aa19.03■□□□□ 0.64
Col18a1-201ENSMUST00000072755 NacadQ5SWP3 1504 aa19.01■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Fam71e1A1L3C1 212 aa19.01■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Hdac5Q9Z2V6 1113 aa19■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Erich6D3Z6S9 713 aa18.99■□□□□ 0.63
Col18a1-201ENSMUST00000072755 PrkcshO08795 521 aa18.96■□□□□ 0.63
Col18a1-201ENSMUST00000072755 Ythdc1E9Q5K9 736 aaKnown RBP18.95■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Fkbp15Q6P9Q6 1216 aaKnown RBP18.95■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Sall2Q9QX96 1004 aa18.93■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Mapk8ip2Q9ERE9 830 aa18.92■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Atp1b4Q99ME6 356 aa18.91■□□□□ 0.62
Col18a1-201ENSMUST00000072755 Ccer2J3QPU5 274 aa18.89■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Zbtb4Q5F293 982 aa18.89■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Nlrp6Q91WS2 869 aa18.87■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Eid3Q3V124 375 aa18.86■□□□□ 0.61
Col18a1-201ENSMUST00000072755 Baz1aO88379 1555 aa18.81■□□□□ 0.6
Col18a1-201ENSMUST00000072755 Gm13695A2AK44 830 aa18.78■□□□□ 0.6
Col18a1-201ENSMUST00000072755 Ccdc9Q8VC31 543 aaKnown RBP18.73■□□□□ 0.59
Col18a1-201ENSMUST00000072755 Pknox2Q8BG99 474 aa18.71■□□□□ 0.59
Col18a1-201ENSMUST00000072755 Prdm10Q3UTQ7 1184 aa18.7■□□□□ 0.58
Col18a1-201ENSMUST00000072755 BlmO88700 1416 aa18.7■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Hsp90aa1P07901 733 aaKnown RBP18.68■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Chic2Q9D9G3 165 aa18.66■□□□□ 0.58
Col18a1-201ENSMUST00000072755 Golga3P55937 1487 aa18.66■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 16.9 ms