RNA–Protein interactions for RNA: ENSMUST00000072755.11

Col18a1-201, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Col18a1, Length 5,595 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-201ENSMUST00000072755 Rhox8Q6VSS7 320 aa24,49■■□□□ 1,51
Col18a1-201ENSMUST00000072755 Rpgrip1Q9EPQ2 1331 aa22,57■■□□□ 1,2
Col18a1-201ENSMUST00000072755 Las1lA2BE28 776 aaKnown RBP22,2■■□□□ 1,15
Col18a1-201ENSMUST00000072755 NischQ80TM9 1593 aa21,86■■□□□ 1,09
Col18a1-201ENSMUST00000072755 Ccdc136Q3TVA9 1136 aa21,77■■□□□ 1,07
Col18a1-201ENSMUST00000072755 Esf1Q3V1V3 845 aaKnown RBP21,7■■□□□ 1,06
Col18a1-201ENSMUST00000072755 Ehmt2Q9Z148 1263 aaKnown RBP21,66■■□□□ 1,06
Col18a1-201ENSMUST00000072755 Cngb1E1AZ71 1325 aa21,65■■□□□ 1,06
Col18a1-201ENSMUST00000072755 Trim41Q5NCC3 630 aa21,43■■□□□ 1,02
Col18a1-201ENSMUST00000072755 Amer1Q7TS75 1132 aa21,32■■□□□ 1
Col18a1-201ENSMUST00000072755 Gab3Q8BSM5 595 aa21,24■□□□□ 0,99
Col18a1-201ENSMUST00000072755 Zeb1Q64318 1117 aa21,22■□□□□ 0,99
Col18a1-201ENSMUST00000072755 Npm2Q80W85 207 aa21,18■□□□□ 0,98
Col18a1-201ENSMUST00000072755 CenpbP27790 599 aa21,18■□□□□ 0,98
Col18a1-201ENSMUST00000072755 Myt1Q8CFC2 1127 aa21,15■□□□□ 0,98
Col18a1-201ENSMUST00000072755 DiexfQ8BTT6 772 aaKnown RBP21,11■□□□□ 0,97
Col18a1-201ENSMUST00000072755 Ube2uB1AUC4 352 aa21,11■□□□□ 0,97
Col18a1-201ENSMUST00000072755 Wdr66E9Q743 1299 aa21,11■□□□□ 0,97
Col18a1-201ENSMUST00000072755 Pelp1Q9DBD5 1123 aaKnown RBP21,02■□□□□ 0,96
Col18a1-201ENSMUST00000072755 Myt1lP97500 1187 aa20,94■□□□□ 0,94
Col18a1-201ENSMUST00000072755 Pcgf6Q99NA9 353 aa20,77■□□□□ 0,91
Col18a1-201ENSMUST00000072755 Acin1Q9JIX8 1338 aaKnown RBP20,74■□□□□ 0,91
Col18a1-201ENSMUST00000072755 Ccdc180J3QNE4 1664 aa20,61■□□□□ 0,89
Col18a1-201ENSMUST00000072755 Rtl1Q7M732 1744 aa20,49■□□□□ 0,87
Col18a1-201ENSMUST00000072755 UbtfP25976 765 aaKnown RBP20,44■□□□□ 0,86
Col18a1-201ENSMUST00000072755 NefmP08553 848 aa20,43■□□□□ 0,86
Col18a1-201ENSMUST00000072755 Ttbk1Q6PCN3 1308 aa20,41■□□□□ 0,86
Col18a1-201ENSMUST00000072755 Abcc9P70170 1546 aa20,39■□□□□ 0,85
Col18a1-201ENSMUST00000072755 HrcG5E8J6 738 aa20,39■□□□□ 0,85
Col18a1-201ENSMUST00000072755 Zcchc6Q5BLK4 1491 aaKnown RBP20,35■□□□□ 0,85
Col18a1-201ENSMUST00000072755 Il27Q8K3I6 234 aa20,33■□□□□ 0,85
Col18a1-201ENSMUST00000072755 Gm35339A0A140LHH9 1649 aa20,14■□□□□ 0,81
Col18a1-201ENSMUST00000072755 Stra8P70278 393 aa20,12■□□□□ 0,81
Col18a1-201ENSMUST00000072755 Supt5hO55201 1082 aaKnown RBP20,07■□□□□ 0,8
Col18a1-201ENSMUST00000072755 Cdk11bP24788 784 aaKnown RBP19,94■□□□□ 0,78
Col18a1-201ENSMUST00000072755 Ap3b1Q9Z1T1 1105 aa19,94■□□□□ 0,78
Col18a1-201ENSMUST00000072755 Neurod1Q60867 357 aa19,92■□□□□ 0,78
Col18a1-201ENSMUST00000072755 Slc24a1Q91WD8 1130 aa19,92■□□□□ 0,78
Col18a1-201ENSMUST00000072755 Abcc8B2RUS7 1588 aa19,92■□□□□ 0,78
Col18a1-201ENSMUST00000072755 Fam50aQ9WV03 339 aaKnown RBP19,88■□□□□ 0,77
Col18a1-201ENSMUST00000072755 4933416C03RikQ3V063 378 aa19,84■□□□□ 0,77
Col18a1-201ENSMUST00000072755 Bcl11aQ9QYE3 773 aa19,75■□□□□ 0,75
Col18a1-201ENSMUST00000072755 4930567H17RikQ3V0K5 233 aa19,72■□□□□ 0,75
Col18a1-201ENSMUST00000072755 Csrnp3P59055 597 aa19,7■□□□□ 0,74
Col18a1-201ENSMUST00000072755 Anp32bQ9EST5 272 aaKnown RBP19,69■□□□□ 0,74
Col18a1-201ENSMUST00000072755 NclP09405 707 aaKnown RBP19,69■□□□□ 0,74
Col18a1-201ENSMUST00000072755 Nop58Q6DFW4 536 aaKnown RBP19,67■□□□□ 0,74
Col18a1-201ENSMUST00000072755 Rtl5Q5DTT4 599 aa19,65■□□□□ 0,74
Col18a1-201ENSMUST00000072755 NrdcQ8BHG1 1161 aa19,64■□□□□ 0,73
Col18a1-201ENSMUST00000072755 Gm38655A0A286YDK6 273 aa19,63■□□□□ 0,73
Col18a1-201ENSMUST00000072755 Npm1Q61937 292 aaKnown RBP19,63■□□□□ 0,73
Col18a1-201ENSMUST00000072755 Os9Q8K2C7 672 aa19,6■□□□□ 0,73
Col18a1-201ENSMUST00000072755 TonslQ6NZL6 1363 aa19,54■□□□□ 0,72
Col18a1-201ENSMUST00000072755 Tnnt3Q9QZ47 272 aa19,51■□□□□ 0,71
Col18a1-201ENSMUST00000072755 1700123L14RikQ3V2K7 440 aa19,48■□□□□ 0,71
Col18a1-201ENSMUST00000072755 Aplp2Q06335 707 aa19,46■□□□□ 0,71
Col18a1-201ENSMUST00000072755 Brd4Q9ESU6 1400 aaKnown RBP19,43■□□□□ 0,7
Col18a1-201ENSMUST00000072755 Mier1Q5UAK0 511 aa19,43■□□□□ 0,7
Col18a1-201ENSMUST00000072755 NeflP08551 543 aa19,4■□□□□ 0,7
Col18a1-201ENSMUST00000072755 Anks4bQ8K3X6 423 aa19,39■□□□□ 0,69
Col18a1-201ENSMUST00000072755 Lmod2Q3UHZ5 550 aa19,38■□□□□ 0,69
Col18a1-201ENSMUST00000072755 Ppargc1bQ8VHJ7 1014 aa19,34■□□□□ 0,69
Col18a1-201ENSMUST00000072755 Eif5bQ05D44 1216 aaKnown RBP19,33■□□□□ 0,68
Col18a1-201ENSMUST00000072755 Plekhg3Q4VAC9 1341 aa19,33■□□□□ 0,68
Col18a1-201ENSMUST00000072755 Rb1cc1Q9ESK9 1588 aa19,29■□□□□ 0,68
Col18a1-201ENSMUST00000072755 Anp32aO35381 247 aa19,24■□□□□ 0,67
Col18a1-201ENSMUST00000072755 Zbtb7cQ8VCZ7 619 aa19,24■□□□□ 0,67
Col18a1-201ENSMUST00000072755 Hnrnpul2Q00PI9 745 aaKnown RBP19,19■□□□□ 0,66
Col18a1-201ENSMUST00000072755 Cep164Q5DU05 1446 aa19,14■□□□□ 0,65
Col18a1-201ENSMUST00000072755 Ifnlr1Q8CGK5 535 aa19,11■□□□□ 0,65
Col18a1-201ENSMUST00000072755 Gm13697A2AK42 830 aa19,11■□□□□ 0,65
Col18a1-201ENSMUST00000072755 Clip1Q922J3 1391 aa19,1■□□□□ 0,65
Col18a1-201ENSMUST00000072755 DaxxO35613 739 aa19,1■□□□□ 0,65
Col18a1-201ENSMUST00000072755 Dcaf1Q80TR8 1506 aa19,09■□□□□ 0,65
Col18a1-201ENSMUST00000072755 ClspnQ80YR7 1315 aa19,07■□□□□ 0,64
Col18a1-201ENSMUST00000072755 Chic1Q8CBW7 227 aa19,04■□□□□ 0,64
Col18a1-201ENSMUST00000072755 Ubl4bQ9CQ84 188 aa19,03■□□□□ 0,64
Col18a1-201ENSMUST00000072755 NacadQ5SWP3 1504 aa19,01■□□□□ 0,63
Col18a1-201ENSMUST00000072755 Fam71e1A1L3C1 212 aa19,01■□□□□ 0,63
Col18a1-201ENSMUST00000072755 Hdac5Q9Z2V6 1113 aa19■□□□□ 0,63
Col18a1-201ENSMUST00000072755 Erich6D3Z6S9 713 aa18,99■□□□□ 0,63
Col18a1-201ENSMUST00000072755 PrkcshO08795 521 aa18,96■□□□□ 0,63
Col18a1-201ENSMUST00000072755 Ythdc1E9Q5K9 736 aaKnown RBP18,95■□□□□ 0,62
Col18a1-201ENSMUST00000072755 Fkbp15Q6P9Q6 1216 aaKnown RBP18,95■□□□□ 0,62
Col18a1-201ENSMUST00000072755 Sall2Q9QX96 1004 aa18,93■□□□□ 0,62
Col18a1-201ENSMUST00000072755 Mapk8ip2Q9ERE9 830 aa18,92■□□□□ 0,62
Col18a1-201ENSMUST00000072755 Atp1b4Q99ME6 356 aa18,91■□□□□ 0,62
Col18a1-201ENSMUST00000072755 Ccer2J3QPU5 274 aa18,89■□□□□ 0,61
Col18a1-201ENSMUST00000072755 Zbtb4Q5F293 982 aa18,89■□□□□ 0,61
Col18a1-201ENSMUST00000072755 Nlrp6Q91WS2 869 aa18,87■□□□□ 0,61
Col18a1-201ENSMUST00000072755 Eid3Q3V124 375 aa18,86■□□□□ 0,61
Col18a1-201ENSMUST00000072755 Baz1aO88379 1555 aa18,81■□□□□ 0,6
Col18a1-201ENSMUST00000072755 Gm13695A2AK44 830 aa18,78■□□□□ 0,6
Col18a1-201ENSMUST00000072755 Ccdc9Q8VC31 543 aaKnown RBP18,73■□□□□ 0,59
Col18a1-201ENSMUST00000072755 Pknox2Q8BG99 474 aa18,71■□□□□ 0,59
Col18a1-201ENSMUST00000072755 Prdm10Q3UTQ7 1184 aa18,7■□□□□ 0,58
Col18a1-201ENSMUST00000072755 BlmO88700 1416 aa18,7■□□□□ 0,58
Col18a1-201ENSMUST00000072755 Hsp90aa1P07901 733 aaKnown RBP18,68■□□□□ 0,58
Col18a1-201ENSMUST00000072755 Chic2Q9D9G3 165 aa18,66■□□□□ 0,58
Col18a1-201ENSMUST00000072755 Golga3P55937 1487 aa18,66■□□□□ 0,58
Retrieved 100 of 22,080 RNA–protein pairs in 9,4 ms