RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 MyclP10166 368 aa22,37■■□□□ 1,17
Col27a1-201ENSMUST00000036300 Arid4bA2CG63 1314 aaKnown RBP22,3■■□□□ 1,16
Col27a1-201ENSMUST00000036300 NgefQ8CHT1 710 aa22,29■■□□□ 1,16
Col27a1-201ENSMUST00000036300 Calr4Q3TQS0 420 aa22,25■■□□□ 1,15
Col27a1-201ENSMUST00000036300 Kdm2aP59997 1161 aa22,19■■□□□ 1,14
Col27a1-201ENSMUST00000036300 Mrs2Q5NCE8 434 aa22,16■■□□□ 1,14
Col27a1-201ENSMUST00000036300 Clstn2Q9ER65 966 aa22,16■■□□□ 1,14
Col27a1-201ENSMUST00000036300 Trim44Q9QXA7 346 aa22,14■■□□□ 1,14
Col27a1-201ENSMUST00000036300 Rgl3Q3UYI5 709 aa22,11■■□□□ 1,13
Col27a1-201ENSMUST00000036300 IqubQ8CDK3 788 aa22,11■■□□□ 1,13
Col27a1-201ENSMUST00000036300 Exosc9Q9JHI7 438 aaKnown RBP22,1■■□□□ 1,13
Col27a1-201ENSMUST00000036300 Ccer2J3QPU5 274 aa22,1■■□□□ 1,13
Col27a1-201ENSMUST00000036300 Trim30dE9PWL0 497 aa22,09■■□□□ 1,13
Col27a1-201ENSMUST00000036300 BlmO88700 1416 aa22,09■■□□□ 1,13
Col27a1-201ENSMUST00000036300 Hsp90ab1P11499 724 aaKnown RBP22,09■■□□□ 1,13
Col27a1-201ENSMUST00000036300 Aplp2Q06335 707 aa22,07■■□□□ 1,12
Col27a1-201ENSMUST00000036300 PnnO35691 725 aaKnown RBP22,06■■□□□ 1,12
Col27a1-201ENSMUST00000036300 PtmaP26350 111 aa22,05■■□□□ 1,12
Col27a1-201ENSMUST00000036300 Apbb1Q9QXJ1 710 aa22,02■■□□□ 1,12
Col27a1-201ENSMUST00000036300 1700019A02RikA0A087WPV9 146 aa22,02■■□□□ 1,12
Col27a1-201ENSMUST00000036300 Sall2Q9QX96 1004 aa22■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Wdr43Q6ZQL4 677 aaKnown RBP21,99■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Grwd1Q810D6 446 aaKnown RBP21,99■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Pes1Q9EQ61 584 aaKnown RBP21,96■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Ggt6Q6PDE7 497 aa21,96■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Srpk2O54781 681 aaKnown RBP21,96■■□□□ 1,11
Col27a1-201ENSMUST00000036300 Neurod2Q62414 383 aa21,94■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Q8BT18 775 aa21,93■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Gm6268A2A3U9 297 aa21,92■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Gm20521D3Z5F7 333 aa21,92■■□□□ 1,1
Col27a1-201ENSMUST00000036300 CanxP35564 591 aaKnown RBP21,92■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Brd4Q9ESU6 1400 aaKnown RBP21,9■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Mroh3A0A1D5RM54 893 aa21,9■■□□□ 1,1
Col27a1-201ENSMUST00000036300 Plcb2A3KGF7 1181 aa21,88■■□□□ 1,09
Col27a1-201ENSMUST00000036300 Stk24Q99KH8 431 aa21,87■■□□□ 1,09
Col27a1-201ENSMUST00000036300 Arhgap27A2AB59 869 aa21,86■■□□□ 1,09
Col27a1-201ENSMUST00000036300 Mapk8ip3Q9ESN9 1337 aa21,84■■□□□ 1,09
Col27a1-201ENSMUST00000036300 Stag3O70576 1240 aa21,83■■□□□ 1,09
Col27a1-201ENSMUST00000036300 Armcx1Q9CX83 456 aa21,83■■□□□ 1,08
Col27a1-201ENSMUST00000036300 Ecm2Q5FW85 670 aa21,82■■□□□ 1,08
Col27a1-201ENSMUST00000036300 Sh3bp5Q9Z131 463 aa21,81■■□□□ 1,08
Col27a1-201ENSMUST00000036300 Anks4bQ8K3X6 423 aa21,76■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Ofd1Q80Z25 1017 aa21,76■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Cnga1P29974 684 aa21,75■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Plin1Q8CGN5 517 aa21,75■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Rrp7aQ9D1C9 280 aaKnown RBP21,74■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Iqcf3Q9D498 203 aa21,72■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Dbr1Q923B1 550 aa21,71■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Ppp1r18Q8BQ30 594 aa21,71■■□□□ 1,07
Col27a1-201ENSMUST00000036300 Card11Q8CIS0 1159 aa21,69■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Hsp90b1P08113 802 aaKnown RBP21,68■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Spryd3E9Q9B3 442 aa21,67■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Anapc15P60007 132 aa21,67■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Casc1Q6TDU8 730 aa21,66■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Ubap1lG3UW59 384 aa21,65■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Rassf8Q8CJ96 419 aa21,65■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Setd5Q5XJV7 1441 aa21,64■■□□□ 1,06
Col27a1-201ENSMUST00000036300 Eif4g2Q62448 906 aaKnown RBP21,59■■□□□ 1,05
Col27a1-201ENSMUST00000036300 Znf316Q6PGE4 1016 aa21,58■■□□□ 1,04
Col27a1-201ENSMUST00000036300 U2surpQ6NV83 1029 aaKnown RBP21,57■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Pcmtd1P59913 357 aa21,55■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Ppm1fQ8CGA0 452 aa21,55■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Htatsf1Q8BGC0 757 aa21,55■■□□□ 1,04
Col27a1-201ENSMUST00000036300 MlecQ6ZQI3 291 aaKnown RBP21,54■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Map7O88735 730 aa21,54■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Rtf1A2AQ19 715 aaKnown RBP21,53■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Isy1Q69ZQ2 285 aaKnown RBP21,53■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Stk26Q99JT2 416 aa21,52■■□□□ 1,04
Col27a1-201ENSMUST00000036300 Wwc2Q6NXJ0 1187 aa21,52■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Prm3Q62100 101 aa21,51■■□□□ 1,03
Col27a1-201ENSMUST00000036300 B4galnt3Q6L8S8 986 aa21,51■■□□□ 1,03
Col27a1-201ENSMUST00000036300 NudcO35685 332 aaKnown RBP21,5■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Rb1cc1Q9ESK9 1588 aa21,5■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Nol10Q5RJG1 687 aaKnown RBP21,5■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Slc4a1apE9PX68 744 aa21,49■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Tnnt1O88346 262 aa21,49■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Chmp4bQ9D8B3 224 aaKnown RBP21,49■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Noc3lQ8VI84 807 aaKnown RBP21,49■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Sox12Q04890 314 aa21,48■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Cep164Q5DU05 1446 aa21,48■■□□□ 1,03
Col27a1-201ENSMUST00000036300 MccE9PWI3 1003 aa21,46■■□□□ 1,03
Col27a1-201ENSMUST00000036300 Zfp777B9EKF4 885 aa21,45■■□□□ 1,02
Col27a1-201ENSMUST00000036300 Senp3Q9EP97 568 aaKnown RBP21,45■■□□□ 1,02
Col27a1-201ENSMUST00000036300 Kif15Q6P9L6 1387 aa21,43■■□□□ 1,02
Col27a1-201ENSMUST00000036300 Adam1bQ8R534 806 aa21,42■■□□□ 1,02
Col27a1-201ENSMUST00000036300 Mtus2Q3UHD3 1353 aa21,39■■□□□ 1,02
Col27a1-201ENSMUST00000036300 Psme1P97371 249 aa21,38■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Mical1Q8VDP3 1048 aa21,38■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Vps53Q8CCB4 832 aa21,37■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Dnai2A2AC93 623 aa21,36■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Mak16Q8BGS0 296 aaKnown RBP21,36■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Cwc22Q8C5N3 908 aaKnown RBP21,36■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Erich6bQ9D4S6 220 aa21,36■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Fam71e1A1L3C1 212 aa21,35■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Ccdc9Q8VC31 543 aaKnown RBP21,35■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Arid3cA6PWV5 409 aa21,35■■□□□ 1,01
Col27a1-201ENSMUST00000036300 KnstrnQ9D9Z1 312 aaKnown RBP21,34■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Ppm1gQ61074 542 aa21,33■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Q3TQI7 289 aaKnown RBP21,33■■□□□ 1,01
Col27a1-201ENSMUST00000036300 Iffo2Q8R2V2 512 aa21,33■■□□□ 1,01
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms