RNA–Protein interactions for RNA: ENSMUST00000036300.12

Col27a1-201, Transcript of Collagen alpha-1(XXVII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col27a1, Length 7,612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col27a1-201ENSMUST00000036300 MyclP10166 368 aa22.37■■□□□ 1.17
Col27a1-201ENSMUST00000036300 Arid4bA2CG63 1314 aaKnown RBP22.3■■□□□ 1.16
Col27a1-201ENSMUST00000036300 NgefQ8CHT1 710 aa22.29■■□□□ 1.16
Col27a1-201ENSMUST00000036300 Calr4Q3TQS0 420 aa22.25■■□□□ 1.15
Col27a1-201ENSMUST00000036300 Kdm2aP59997 1161 aa22.19■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Mrs2Q5NCE8 434 aa22.16■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Clstn2Q9ER65 966 aa22.16■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Trim44Q9QXA7 346 aa22.14■■□□□ 1.14
Col27a1-201ENSMUST00000036300 Rgl3Q3UYI5 709 aa22.11■■□□□ 1.13
Col27a1-201ENSMUST00000036300 IqubQ8CDK3 788 aa22.11■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Exosc9Q9JHI7 438 aaKnown RBP22.1■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Ccer2J3QPU5 274 aa22.1■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Trim30dE9PWL0 497 aa22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 BlmO88700 1416 aa22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Hsp90ab1P11499 724 aaKnown RBP22.09■■□□□ 1.13
Col27a1-201ENSMUST00000036300 Aplp2Q06335 707 aa22.07■■□□□ 1.12
Col27a1-201ENSMUST00000036300 PnnO35691 725 aaKnown RBP22.06■■□□□ 1.12
Col27a1-201ENSMUST00000036300 PtmaP26350 111 aa22.05■■□□□ 1.12
Col27a1-201ENSMUST00000036300 Apbb1Q9QXJ1 710 aa22.02■■□□□ 1.12
Col27a1-201ENSMUST00000036300 1700019A02RikA0A087WPV9 146 aa22.02■■□□□ 1.12
Col27a1-201ENSMUST00000036300 Sall2Q9QX96 1004 aa22■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Wdr43Q6ZQL4 677 aaKnown RBP21.99■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Grwd1Q810D6 446 aaKnown RBP21.99■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Pes1Q9EQ61 584 aaKnown RBP21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Ggt6Q6PDE7 497 aa21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Srpk2O54781 681 aaKnown RBP21.96■■□□□ 1.11
Col27a1-201ENSMUST00000036300 Neurod2Q62414 383 aa21.94■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Q8BT18 775 aa21.93■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Gm6268A2A3U9 297 aa21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Gm20521D3Z5F7 333 aa21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 CanxP35564 591 aaKnown RBP21.92■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Brd4Q9ESU6 1400 aaKnown RBP21.9■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Mroh3A0A1D5RM54 893 aa21.9■■□□□ 1.1
Col27a1-201ENSMUST00000036300 Plcb2A3KGF7 1181 aa21.88■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Stk24Q99KH8 431 aa21.87■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Arhgap27A2AB59 869 aa21.86■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Mapk8ip3Q9ESN9 1337 aa21.84■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Stag3O70576 1240 aa21.83■■□□□ 1.09
Col27a1-201ENSMUST00000036300 Armcx1Q9CX83 456 aa21.83■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Ecm2Q5FW85 670 aa21.82■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Sh3bp5Q9Z131 463 aa21.81■■□□□ 1.08
Col27a1-201ENSMUST00000036300 Anks4bQ8K3X6 423 aa21.76■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Ofd1Q80Z25 1017 aa21.76■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Cnga1P29974 684 aa21.75■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Plin1Q8CGN5 517 aa21.75■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Rrp7aQ9D1C9 280 aaKnown RBP21.74■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Iqcf3Q9D498 203 aa21.72■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Dbr1Q923B1 550 aa21.71■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Ppp1r18Q8BQ30 594 aa21.71■■□□□ 1.07
Col27a1-201ENSMUST00000036300 Card11Q8CIS0 1159 aa21.69■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Hsp90b1P08113 802 aaKnown RBP21.68■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Spryd3E9Q9B3 442 aa21.67■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Anapc15P60007 132 aa21.67■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Casc1Q6TDU8 730 aa21.66■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Ubap1lG3UW59 384 aa21.65■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Rassf8Q8CJ96 419 aa21.65■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Setd5Q5XJV7 1441 aa21.64■■□□□ 1.06
Col27a1-201ENSMUST00000036300 Eif4g2Q62448 906 aaKnown RBP21.59■■□□□ 1.05
Col27a1-201ENSMUST00000036300 Znf316Q6PGE4 1016 aa21.58■■□□□ 1.04
Col27a1-201ENSMUST00000036300 U2surpQ6NV83 1029 aaKnown RBP21.57■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Pcmtd1P59913 357 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Ppm1fQ8CGA0 452 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Htatsf1Q8BGC0 757 aa21.55■■□□□ 1.04
Col27a1-201ENSMUST00000036300 MlecQ6ZQI3 291 aaKnown RBP21.54■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Map7O88735 730 aa21.54■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Rtf1A2AQ19 715 aaKnown RBP21.53■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Isy1Q69ZQ2 285 aaKnown RBP21.53■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Stk26Q99JT2 416 aa21.52■■□□□ 1.04
Col27a1-201ENSMUST00000036300 Wwc2Q6NXJ0 1187 aa21.52■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Prm3Q62100 101 aa21.51■■□□□ 1.03
Col27a1-201ENSMUST00000036300 B4galnt3Q6L8S8 986 aa21.51■■□□□ 1.03
Col27a1-201ENSMUST00000036300 NudcO35685 332 aaKnown RBP21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Rb1cc1Q9ESK9 1588 aa21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Nol10Q5RJG1 687 aaKnown RBP21.5■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Slc4a1apE9PX68 744 aa21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Tnnt1O88346 262 aa21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Chmp4bQ9D8B3 224 aaKnown RBP21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Noc3lQ8VI84 807 aaKnown RBP21.49■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Sox12Q04890 314 aa21.48■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Cep164Q5DU05 1446 aa21.48■■□□□ 1.03
Col27a1-201ENSMUST00000036300 MccE9PWI3 1003 aa21.46■■□□□ 1.03
Col27a1-201ENSMUST00000036300 Zfp777B9EKF4 885 aa21.45■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Senp3Q9EP97 568 aaKnown RBP21.45■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Kif15Q6P9L6 1387 aa21.43■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Adam1bQ8R534 806 aa21.42■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Mtus2Q3UHD3 1353 aa21.39■■□□□ 1.02
Col27a1-201ENSMUST00000036300 Psme1P97371 249 aa21.38■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Mical1Q8VDP3 1048 aa21.38■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Vps53Q8CCB4 832 aa21.37■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Dnai2A2AC93 623 aa21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Mak16Q8BGS0 296 aaKnown RBP21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Cwc22Q8C5N3 908 aaKnown RBP21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Erich6bQ9D4S6 220 aa21.36■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Fam71e1A1L3C1 212 aa21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Ccdc9Q8VC31 543 aaKnown RBP21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Arid3cA6PWV5 409 aa21.35■■□□□ 1.01
Col27a1-201ENSMUST00000036300 KnstrnQ9D9Z1 312 aaKnown RBP21.34■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Ppm1gQ61074 542 aa21.33■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Q3TQI7 289 aaKnown RBP21.33■■□□□ 1.01
Col27a1-201ENSMUST00000036300 Iffo2Q8R2V2 512 aa21.33■■□□□ 1.01
Retrieved 100 of 22,080 RNA–protein pairs in 26.7 ms