RNA–Protein interactions for RNA: ENST00000509268.1

XRCC4-204, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 2

Gene XRCC4, Length 1,567 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-204ENST00000509268 NRXN2Q9P2S2 1712 aa0.78□□□□□ -2.28
XRCC4-204ENST00000509268 SPTBP11277 2137 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 Q5VV11 94 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 CCL19Q99731 98 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 FAIMQ9NVQ4 179 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 MED14O60244 1454 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 GAPVD1Q14C86 1478 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 FYCO1Q9BQS8 1478 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 RREB1Q92766 1687 aa0.78□□□□□ -2.29
XRCC4-204ENST00000509268 KDM6BO15054 1643 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 PHIPQ8WWQ0 1821 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 NOTCH1P46531 2555 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 KIAA1551Q9HCM1 1747 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 PRDM15P57071 1507 aaPredicted RBP0.77□□□□□ -2.29
XRCC4-204ENST00000509268 NCOA6Q14686 2063 aaPredicted RBP0.77□□□□□ -2.29
XRCC4-204ENST00000509268 DOCK11Q5JSL3 2073 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 ASCC3Q8N3C0 2202 aaKnown RBP0.77□□□□□ -2.29
XRCC4-204ENST00000509268 PLEKHH2Q8IVE3 1493 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 TRAV22A0A0B4J277 110 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 NAP1L6A6NFF2 107 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 C10orf142B7Z368 130 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 EDDM3BP56851 147 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 BPESC1Q9GZL8 116 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 NDUFA4L2Q9NRX3 87 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 TECTAO75443 2155 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 MAST4O15021 2626 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 NWD2Q9ULI1 1742 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 PLXNA1Q9UIW2 1896 aa0.77□□□□□ -2.29
XRCC4-204ENST00000509268 E9PCH4 1651 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 SHANK2Q9UPX8 1470 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 TRANK1O15050 2925 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.76□□□□□ -2.29
XRCC4-204ENST00000509268 A0A1W2PPM0 123 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 CRYM-AS1A6NIL9 109 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 CHKB-CPT1BH3BT56 60 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 FXYD1O00168 92 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 PPP1R17O96001 155 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 KRTDAPP60985 99 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 UBE2D3P61077 147 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 UBE2D2P62837 147 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 Q6ZQY7 126 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 Q86TA4 180 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 FAM167A-AS1Q96KT0 104 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 MGST2Q99735 147 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 C20orf78Q9BR46 151 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 MANBALQ9NQG1 85 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 CDC42SE2Q9NRR3 84 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 BET1LQ9NYM9 111 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 MED13LQ71F56 2210 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 COL4A1P02462 1669 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 TOPAZ1Q8N9V7 1692 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 AFDNP55196 1824 aaKnown RBP0.76□□□□□ -2.29
XRCC4-204ENST00000509268 ARFGEF1Q9Y6D6 1849 aa0.76□□□□□ -2.29
XRCC4-204ENST00000509268 FLG2Q5D862 2391 aaPredicted RBP0.76□□□□□ -2.29
XRCC4-204ENST00000509268 CHD1O14646 1710 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 BAZ1AQ9NRL2 1556 aaPredicted RBP0.75□□□□□ -2.29
XRCC4-204ENST00000509268 LAMC3Q9Y6N6 1575 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 ABCA1O95477 2261 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 TRBV7-7A0A0K0K1E9 115 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 ATOX1O00244 68 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 HMGN4O00479 90 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 SFT2D2O95562 160 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 FAUP35544 74 aaKnown RBP0.75□□□□□ -2.29
XRCC4-204ENST00000509268 ASIPP42127 132 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 EFNA4P52798 201 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 CAV3P56539 151 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 KLKP1Q107X0 134 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 Q96NJ1 140 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 LENEPQ9Y5L5 61 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 V9GYV3 84 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 TET3O43151 1660 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 PI4KAP42356 2102 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 SORL1Q92673 2214 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 PSME4Q14997 1843 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 UBR4Q5T4S7 5183 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 COL4A6Q14031 1691 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 SETD2Q9BYW2 2564 aaPredicted RBP0.75□□□□□ -2.29
XRCC4-204ENST00000509268 DLG5Q8TDM6 1919 aa0.75□□□□□ -2.29
XRCC4-204ENST00000509268 K7EP34 96 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 APOC3P02656 99 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 NMBP08949 121 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TRAPPC2P0DI81 140 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TRAPPC2BP0DI82 140 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 SPAG11BQ08648 103 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 TDRG1Q3Y452 100 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 FAM74A4Q5TZK3 123 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 SPAG11AQ6PDA7 123 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 SFTA2Q6UW10 78 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 Q8N6K4 173 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 SERP2Q8N6R1 65 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 WFDC6Q9BQY6 131 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 DYNLRB1Q9NP97 96 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PRO1854Q9UHT4 67 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PTPN13Q12923 2485 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 MARF1Q9Y4F3 1742 aaKnown RBP0.74□□□□□ -2.29
XRCC4-204ENST00000509268 MRC1P22897 1456 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PXDNQ92626 1479 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 PARP14Q460N5 1801 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 DOCK2Q92608 1830 aa0.74□□□□□ -2.29
XRCC4-204ENST00000509268 ANKRD17O75179 2603 aaKnown RBP0.74□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms