RNA–Protein interactions for RNA: ENSMUST00000201711.3

Pdgfra-205, Transcript of Platelet-derived growth factor receptor alpha, mousemouse

TSL 1 (best) BASIC

Gene Pdgfra, Length 4,088 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdgfra-205ENSMUST00000201711 Vmn1r149E9PWL6 307 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 E430018J23RikE9PZQ8 461 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Vmn1r101E9Q365 307 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Vmn1r158G3UY92 307 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 P01787 123 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 P04212 136 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Mbd6Q3TY92 1003 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Cd96Q3U0X8 602 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Zic3Q62521 466 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Olfr1178Q7TR20 323 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Mbnl1Q9JKP5 341 aaKnown RBP10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Trav6-1A0A075B5Z8 112 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Obp2bA2BHR0 176 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Ca5aP23589 299 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Q24JP4 165 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Foxf1Q61080 378 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Megf10Q6DIB5 1147 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Olfr1246Q7TQZ6 314 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Aqp6Q8C4A0 293 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Bpifa5Q9CQX3 270 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Cbln3Q9JHG0 197 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Crim1Q9JLL0 1037 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Klk4Q9Z0M1 255 aa10.9□□□□□ -0.66
Pdgfra-205ENSMUST00000201711 Lrp4Q8VI56 1905 aa10.9□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm21974F6W3F3 119 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Scgb1b3J3QJY4 93 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm21732J3QM79 361 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm21921J3QNB5 361 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Wdr83osQ6ZWX0 106 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 PaxxQ8K0Y7 205 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Uqcc3Q8K2T4 89 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Olfr877Q8VF62 311 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ammecr1Q9JHT5 344 aaKnown RBP10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ighv14-2A0A075B5R7 117 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Klrd1O54707 179 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Iglc2P01844 104 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Smim6Q3U0I6 56 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Srsf7Q8BL97 267 aaKnown RBP10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Olfr816Q8VFU2 312 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Rnf151Q9CQ29 239 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Vps25Q9CQ80 176 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Opn3Q9WUK7 400 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Myo15bI7HPW8 3033 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm5093E9PZB3 174 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Lgals1P16045 135 aaKnown RBP10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 P18526 117 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tcl1b2P56841 117 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Nkx3-1P97436 237 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Prss35Q8C0F9 409 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 MNCb-2875Q9DCB3 74 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Mpdu1Q9R0Q9 247 aa10.89□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Hoxa3P02831 443 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Lynx1P0DP60 116 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ssty1P13675 232 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Nutf2P61971 127 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tusc5Q8C838 173 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Olfr1258Q8VGN6 311 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Cldn16Q925N4 235 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tmem126aQ9D8Y1 196 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 BC053393A0A0B4J1F6 192 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tcrg-V4A0A0B4J1J8 138 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Znf431E9QAG8 526 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ins1P01325 108 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ndufa2Q9CQ75 99 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Acrv1P50289 261 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Sfrp2P97299 295 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ssbp4Q3U4B1 363 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Wfdc9Q3UW41 83 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm5868Q8BJG1 145 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Fancd2osQ9D4K4 178 aa10.88□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tnrc6aQ3UHK8 1896 aaKnown RBP10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Rhox7bA6PW38 321 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm44501A8R0T9 150 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 B1ARW8 110 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Cdkn1aP39689 159 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm10447Q3UQ92 135 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tbr1Q64336 681 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Saxo2Q8BQB6 394 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Lypd8Q9D7S0 255 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Efnb3O35393 340 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Il3raP26952 396 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Cbln4Q8BME9 198 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Trbv12-2A0A0B4J1H1 124 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 1700067P10RikG3X8U2 183 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Scgb2a2J3KMP9 96 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 C330021F23RikQ8C7T0 141 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Mien1Q9CQ86 115 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Fam162bQ9CX19 157 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Arhgef17Q80U35 2057 aa10.87□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Ighv9-3A0A0B4J1J5 117 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Mettl23A2AA28 253 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tmem262D3Z338 116 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Gm28305F6U473 122 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Tmem256Q5F285 113 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Olfr965Q7TRA7 312 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Fhl4Q8CDC8 279 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Cma2Q91VB1 246 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Insig2Q91WG1 225 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 AmtnQ9D3J8 213 aa10.86□□□□□ -0.67
Pdgfra-205ENSMUST00000201711 Col4a4Q9QZR9 1682 aa10.86□□□□□ -0.67
Retrieved 100 of 22,080 RNA–protein pairs in 47 ms