RNA–Protein interactions for RNA: ENST00000618056.4

PMS1-220, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-220ENST00000618056 RAB5AP20339 215 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 RAB4BP61018 213 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 NFE4Q86UQ8 179 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 OCC1Q8TAD7 63 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 URGCP-MRPS24S4R325 110 aa16.86■□□□□ 0.29
PMS1-220ENST00000618056 ELOBQ15370 118 aa16.85■□□□□ 0.29
PMS1-220ENST00000618056 NUDT10Q8NFP7 164 aa16.85■□□□□ 0.29
PMS1-220ENST00000618056 NUDT11Q96G61 164 aa16.85■□□□□ 0.29
PMS1-220ENST00000618056 MSRB1Q9NZV6 116 aa16.85■□□□□ 0.29
PMS1-220ENST00000618056 KIAA1109Q2LD37 5005 aa16.84■□□□□ 0.29
PMS1-220ENST00000618056 K7EN84 100 aa16.84■□□□□ 0.29
PMS1-220ENST00000618056 S100PP25815 95 aa16.84■□□□□ 0.29
PMS1-220ENST00000618056 AP1S3Q96PC3 154 aa16.83■□□□□ 0.28
PMS1-220ENST00000618056 TNFRSF18Q9Y5U5 241 aa16.83■□□□□ 0.28
PMS1-220ENST00000618056 F2Z2F3 143 aa16.82■□□□□ 0.28
PMS1-220ENST00000618056 CACNG7P62955 275 aa16.82■□□□□ 0.28
PMS1-220ENST00000618056 OR10G8Q8NGN5 311 aa16.82■□□□□ 0.28
PMS1-220ENST00000618056 TPPP3Q9BW30 176 aa16.82■□□□□ 0.28
PMS1-220ENST00000618056 KIF25-AS1Q9Y6Z4 181 aa16.82■□□□□ 0.28
PMS1-220ENST00000618056 RPL36AP83881 106 aaKnown RBP16.81■□□□□ 0.28
PMS1-220ENST00000618056 ZNF56Q15929 161 aa16.81■□□□□ 0.28
PMS1-220ENST00000618056 RPL36ALQ969Q0 106 aaKnown RBP16.81■□□□□ 0.28
PMS1-220ENST00000618056 HERC2O95714 4834 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 TRBV7-3A0A075B6L6 115 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 TGIF2-C20orf24A0A0A6YYL0 155 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 C1orf196B1AJZ1 125 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 SSTP61278 116 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 RNASE7Q9H1E1 156 aaKnown RBP16.8■□□□□ 0.28
PMS1-220ENST00000618056 SMIM17P0DL12 118 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 RAB5BP61020 215 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 UBE2D3P61077 147 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 UBE2D2P62837 147 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 KCNIP4Q6PIL6 250 aa16.8■□□□□ 0.28
PMS1-220ENST00000618056 RPP21Q9H633 154 aaKnown RBP16.8■□□□□ 0.28
PMS1-220ENST00000618056 TRBV24-1A0A075B6N3 115 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 IBA57-AS1B1ANH7 110 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 CTRLP40313 264 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 WDR73Q6P4I2 378 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 LYZL1Q6UWQ5 148 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 NEXN-AS1Q8NBZ9 246 aa16.78■□□□□ 0.28
PMS1-220ENST00000618056 RPS10P46783 165 aaKnown RBP16.77■□□□□ 0.28
PMS1-220ENST00000618056 IMMP2LQ96T52 175 aa16.77■□□□□ 0.28
PMS1-220ENST00000618056 LOC105371267A0A1B0GV96 52 aa16.76■□□□□ 0.27
PMS1-220ENST00000618056 F5H697 171 aa16.76■□□□□ 0.27
PMS1-220ENST00000618056 FAM231DQ6ZW35 169 aa16.76■□□□□ 0.27
PMS1-220ENST00000618056 CNFNQ9BYD5 112 aa16.76■□□□□ 0.27
PMS1-220ENST00000618056 IGHV3-30P01768 117 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 IGHV3-33P01772 117 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 IGHV3-30-3P0DP02 117 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 IGHV3-30-5P0DP03 117 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 ERVFC1-1P60608 527 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 LRP1BQ9NZR2 4599 aa16.75■□□□□ 0.27
PMS1-220ENST00000618056 LAGE3Q14657 143 aa16.74■□□□□ 0.27
PMS1-220ENST00000618056 SPATA12Q7Z6I5 190 aa16.74■□□□□ 0.27
PMS1-220ENST00000618056 BTF3L4Q96K17 158 aa16.74■□□□□ 0.27
PMS1-220ENST00000618056 OSTCQ9NRP0 149 aa16.74■□□□□ 0.27
PMS1-220ENST00000618056 TRGC1P0CF51 173 aa16.73■□□□□ 0.27
PMS1-220ENST00000618056 NTF3P20783 257 aa16.73■□□□□ 0.27
PMS1-220ENST00000618056 DNAH5Q8TE73 4624 aa16.73■□□□□ 0.27
PMS1-220ENST00000618056 C16orf90A8MZG2 172 aa16.73■□□□□ 0.27
PMS1-220ENST00000618056 Q8N3U1 123 aa16.72■□□□□ 0.27
PMS1-220ENST00000618056 GATCO43716 136 aaKnown RBP16.71■□□□□ 0.27
PMS1-220ENST00000618056 CT83Q5H943 113 aa16.71■□□□□ 0.27
PMS1-220ENST00000618056 GTSF1Q8WW33 167 aa16.71■□□□□ 0.27
PMS1-220ENST00000618056 DPH3P1Q9H4G8 78 aa16.71■□□□□ 0.27
PMS1-220ENST00000618056 A8MWL6 223 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 M0QY20 66 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 MGPP08493 103 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 KRTAP10-2P60368 255 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 NIT1Q86X76 327 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 V9GYV3 84 aa16.7■□□□□ 0.26
PMS1-220ENST00000618056 TRAV9-1A0A075B6T8 112 aa16.69■□□□□ 0.26
PMS1-220ENST00000618056 H7C1H1 209 aa16.69■□□□□ 0.26
PMS1-220ENST00000618056 EREGO14944 169 aa16.69■□□□□ 0.26
PMS1-220ENST00000618056 RYR1P21817 5038 aa16.68■□□□□ 0.26
PMS1-220ENST00000618056 A0A087WTM6 91 aa16.68■□□□□ 0.26
PMS1-220ENST00000618056 TRBV6-8A0A0A6YYG3 113 aa16.68■□□□□ 0.26
PMS1-220ENST00000618056 SUMO4Q6EEV6 95 aa16.68■□□□□ 0.26
PMS1-220ENST00000618056 DAZ4Q86SG3 579 aaKnown RBP16.68■□□□□ 0.26
PMS1-220ENST00000618056 CHCHD7Q9BUK0 85 aa16.68■□□□□ 0.26
PMS1-220ENST00000618056 DAZ3Q9NR90 486 aaKnown RBP16.68■□□□□ 0.26
PMS1-220ENST00000618056 TWIST1Q15672 202 aa16.67■□□□□ 0.26
PMS1-220ENST00000618056 DNAJC30Q96LL9 226 aa16.67■□□□□ 0.26
PMS1-220ENST00000618056 Q9HAA7 133 aa16.67■□□□□ 0.26
PMS1-220ENST00000618056 FOXA3P55318 350 aaPredicted RBP16.66■□□□□ 0.26
PMS1-220ENST00000618056 TMEM97Q5BJF2 176 aa16.66■□□□□ 0.26
PMS1-220ENST00000618056 TRAV8-3A0A0A6YYJ7 113 aa16.65■□□□□ 0.26
PMS1-220ENST00000618056 PSCAO43653 123 aa16.65■□□□□ 0.26
PMS1-220ENST00000618056 TRGC2P03986 189 aa16.64■□□□□ 0.25
PMS1-220ENST00000618056 S100A6P06703 90 aa16.64■□□□□ 0.25
PMS1-220ENST00000618056 RASL11AQ6T310 242 aa16.64■□□□□ 0.25
PMS1-220ENST00000618056 PGPEP1Q9NXJ5 209 aa16.64■□□□□ 0.25
PMS1-220ENST00000618056 A0A087WX48 190 aa16.63■□□□□ 0.25
PMS1-220ENST00000618056 CDPF1Q6NVV7 123 aa16.62■□□□□ 0.25
PMS1-220ENST00000618056 NTM-AS1Q6ZSK4 140 aa16.62■□□□□ 0.25
PMS1-220ENST00000618056 TSKUQ8WUA8 353 aa16.62■□□□□ 0.25
PMS1-220ENST00000618056 TM2D2Q9BX73 214 aa16.62■□□□□ 0.25
PMS1-220ENST00000618056 GFRA4Q9GZZ7 299 aa16.62■□□□□ 0.25
PMS1-220ENST00000618056 LRCOL1A6NCL2 159 aa16.61■□□□□ 0.25
PMS1-220ENST00000618056 FAM231BA6NCW3 169 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms