RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Ptrh2Q8R2Y8 181 aaKnown RBP13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Lsm4Q9QXA5 137 aaKnown RBP13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Mpdu1Q9R0Q9 247 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cep250Q60952 2414 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tpsab1Q02844 273 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr476Q8VGI4 310 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ighv1-19A0A0A6YWX0 117 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Fcrl6A1YIY0 268 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Vmn1r224E9PWK2 298 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P04940 107 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P04941 107 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Khdc1bP0C7A0 126 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Smim9Q3V0X1 137 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tmem204Q7TQI0 226 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1382Q7TQT3 311 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Rnd1Q8BLR7 232 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Rbm7Q9CQT2 265 aaKnown RBP13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Kcnmb2Q9CZM9 235 aa13.07□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Dtx1Q61010 627 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1272Q8VGN8 308 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ighv5-12-4A0A0A6YWG4 117 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ssty1P13675 232 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Klk1b22P15948 259 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Pax5Q02650 391 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cnn1Q08091 297 aaKnown RBP13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Smim7Q5RKS2 75 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cd200r3Q5UKY4 296 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tmem167aQ9CR64 72 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tmem190Q9D2E9 166 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gpr35Q9ES90 307 aa13.06□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P01915 264 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Sumo1P63166 101 aaKnown RBP13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Dlx4P70436 240 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ido2Q8R0V5 405 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr715Q8VG49 315 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Siglec12Q91Y57 467 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Trbv13-3A0A0B4J1H2 113 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ighv9-3A0A0B4J1J5 117 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm35060A0A140LIV7 231 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm10203F6QJ09 66 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tnfrsf17O88472 185 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P01674 108 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P01783 136 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Q3U1D9 316 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm10277Q6R5C6 214 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Sh2d6Q9D413 297 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Btbd17Q9DB72 478 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Tmem9bQ9JJR8 199 aa13.05□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm21732J3QM79 361 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm21921J3QNB5 361 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Znf146Q8BQN6 292 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr491Q8VG06 310 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1258Q8VGN6 311 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm27027S4R1M6 97 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cd96Q3U0X8 602 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Usf1Q61069 310 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1454Q8VFW2 307 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 MNCb-2875Q9DCB3 74 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 TracA0A075B662 137 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm12169F2Z474 250 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm21974F6W3F3 119 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 P01630 113 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Q08AU9 97 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ang4Q3TMQ6 144 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Fa2hQ5MPP0 372 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Patz1Q5NBY9 687 aaKnown RBP13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Fam222bQ6P539 562 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Commd9Q8K2Q0 198 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Fgfrl1Q91V87 529 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Rab4bQ91ZR1 213 aa13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Sptbn1Q62261 2363 aaKnown RBP13.04□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Spg11Q3UHA3 2430 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 F5O88783 2183 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Slc35d1A2AKQ0 355 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1189A2AV11 306 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ccl1P10146 92 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 AdipoqQ60994 247 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Npy6rQ61212 371 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1371Q7TQT7 311 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Zmat5Q9CQR5 170 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Cml1Q9JIZ0 222 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Rpl27aP14115 148 aaKnown RBP13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Ptbp1P17225 527 aaKnown RBP13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 CebpdQ00322 268 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Prss3Q792Z0 246 aaKnown RBP13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr963Q7TRA9 311 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1269Q8VEZ2 309 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Olfr1265Q8VEZ3 309 aa13.03□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Armcx4E9PWM3 2356 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm14325A2AW67 498 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Lgals3P16110 264 aaKnown RBP13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Rom1P32958 351 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 PpoxP51175 477 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 OpalinQ7M750 143 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Nicn1Q9CQM0 213 aa13.02□□□□□ -0.32
Ckap4-201ENSMUST00000053871 Gm42420A0A0J9YUQ2 99 aa13.02□□□□□ -0.33
Ckap4-201ENSMUST00000053871 Spint5J3KMK8 105 aa13.02□□□□□ -0.33
Ckap4-201ENSMUST00000053871 Cxcl13O55038 109 aa13.02□□□□□ -0.33
Ckap4-201ENSMUST00000053871 Rbp4Q00724 201 aa13.02□□□□□ -0.33
Ckap4-201ENSMUST00000053871 Dppa1Q810Y7 116 aa13.02□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 61.5 ms