Protein–RNA interactions for Protein: O88472

Tnfrsf17, Tumor necrosis factor receptor superfamily member 17, mousemouse

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf17O88472 Gm25239-201ENSMUST00000174915 86 ntBASIC38■■■■□ 3.67
Tnfrsf17O88472 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC35.47■■■■□ 3.27
Tnfrsf17O88472 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
Tnfrsf17O88472 Gm24109-201ENSMUST00000175489 103 ntBASIC33.29■■■□□ 2.92
Tnfrsf17O88472 Gm15042-201ENSMUST00000120212 883 ntBASIC32.54■■■□□ 2.8
Tnfrsf17O88472 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC32.18■■■□□ 2.74
Tnfrsf17O88472 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
Tnfrsf17O88472 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Tnfrsf17O88472 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Tnfrsf17O88472 Gm15045-201ENSMUST00000117359 883 ntBASIC31.71■■■□□ 2.67
Tnfrsf17O88472 Gm23366-201ENSMUST00000175022 89 ntBASIC31.65■■■□□ 2.66
Tnfrsf17O88472 AC153911.1-202ENSMUST00000218534 1034 ntBASIC31.29■■■□□ 2.6
Tnfrsf17O88472 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC31.02■■■□□ 2.56
Tnfrsf17O88472 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
Tnfrsf17O88472 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
Tnfrsf17O88472 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.88■■■□□ 2.53
Tnfrsf17O88472 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
Tnfrsf17O88472 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Tnfrsf17O88472 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC30.28■■■□□ 2.44
Tnfrsf17O88472 Gm25238-201ENSMUST00000174914 89 ntBASIC30.22■■■□□ 2.43
Tnfrsf17O88472 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.21■■■□□ 2.43
Tnfrsf17O88472 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC30.2■■■□□ 2.43
Tnfrsf17O88472 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.59■■■□□ 2.33
Tnfrsf17O88472 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.55■■■□□ 2.32
Tnfrsf17O88472 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.3
Tnfrsf17O88472 Gm25262-201ENSMUST00000174934 133 ntBASIC29.29■■■□□ 2.28
Tnfrsf17O88472 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.17■■■□□ 2.26
Tnfrsf17O88472 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC29.16■■■□□ 2.26
Tnfrsf17O88472 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC29.02■■■□□ 2.24
Tnfrsf17O88472 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Tnfrsf17O88472 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.96■■■□□ 2.23
Tnfrsf17O88472 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.91■■■□□ 2.22
Tnfrsf17O88472 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC28.9■■■□□ 2.22
Tnfrsf17O88472 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
Tnfrsf17O88472 Gm26115-201ENSMUST00000175605 87 ntBASIC28.85■■■□□ 2.21
Tnfrsf17O88472 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.84■■■□□ 2.21
Tnfrsf17O88472 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
Tnfrsf17O88472 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.76■■■□□ 2.19
Tnfrsf17O88472 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.19
Tnfrsf17O88472 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.18
Tnfrsf17O88472 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC28.6■■■□□ 2.17
Tnfrsf17O88472 Gm8109-201ENSMUST00000194076 746 ntBASIC28.59■■■□□ 2.17
Tnfrsf17O88472 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
Tnfrsf17O88472 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC28.54■■■□□ 2.16
Tnfrsf17O88472 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.49■■■□□ 2.15
Tnfrsf17O88472 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
Tnfrsf17O88472 Gm27325-201ENSMUST00000175467 74 ntBASIC28.41■■■□□ 2.14
Tnfrsf17O88472 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.13
Tnfrsf17O88472 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.35■■■□□ 2.13
Tnfrsf17O88472 Rab21-202ENSMUST00000218831 843 ntBASIC28.33■■■□□ 2.13
Tnfrsf17O88472 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
Tnfrsf17O88472 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.17■■■□□ 2.1
Tnfrsf17O88472 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Tnfrsf17O88472 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Tnfrsf17O88472 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Tnfrsf17O88472 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.98■■■□□ 2.07
Tnfrsf17O88472 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.96■■■□□ 2.07
Tnfrsf17O88472 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.94■■■□□ 2.06
Tnfrsf17O88472 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.93■■■□□ 2.06
Tnfrsf17O88472 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.91■■■□□ 2.06
Tnfrsf17O88472 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Tnfrsf17O88472 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.73■■■□□ 2.03
Tnfrsf17O88472 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
Tnfrsf17O88472 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
Tnfrsf17O88472 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.67■■■□□ 2.02
Tnfrsf17O88472 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
Tnfrsf17O88472 Gm24804-201ENSMUST00000174982 85 ntBASIC27.59■■■□□ 2.01
Tnfrsf17O88472 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
Tnfrsf17O88472 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.53■■■□□ 2
Tnfrsf17O88472 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.5■■□□□ 1.99
Tnfrsf17O88472 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.43■■□□□ 1.98
Tnfrsf17O88472 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.4■■□□□ 1.98
Tnfrsf17O88472 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC27.36■■□□□ 1.97
Tnfrsf17O88472 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC27.35■■□□□ 1.97
Tnfrsf17O88472 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.32■■□□□ 1.96
Tnfrsf17O88472 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
Tnfrsf17O88472 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.22■■□□□ 1.95
Tnfrsf17O88472 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC27.21■■□□□ 1.95
Tnfrsf17O88472 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
Tnfrsf17O88472 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC27.2■■□□□ 1.94
Tnfrsf17O88472 Gm27322-201ENSMUST00000184007 104 ntBASIC27.18■■□□□ 1.94
Tnfrsf17O88472 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Tnfrsf17O88472 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Tnfrsf17O88472 Zfp131-205ENSMUST00000223812 663 ntBASIC27.11■■□□□ 1.93
Tnfrsf17O88472 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC27.1■■□□□ 1.93
Tnfrsf17O88472 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
Tnfrsf17O88472 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Tnfrsf17O88472 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC27.01■■□□□ 1.91
Tnfrsf17O88472 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Tnfrsf17O88472 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27■■□□□ 1.91
Tnfrsf17O88472 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC26.99■■□□□ 1.91
Tnfrsf17O88472 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tnfrsf17O88472 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Tnfrsf17O88472 Pradc1-201ENSMUST00000032080 1038 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Tnfrsf17O88472 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.93■■□□□ 1.9
Tnfrsf17O88472 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC26.93■■□□□ 1.9
Tnfrsf17O88472 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC26.92■■□□□ 1.9
Tnfrsf17O88472 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC26.91■■□□□ 1.9
Tnfrsf17O88472 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
Tnfrsf17O88472 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.88■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 59.8 ms