RNA–Protein interactions for RNA: ENSMUST00000034713.8

Ldlr-201, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,627 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-201ENSMUST00000034713 Gm10912Q3UXH0 145 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 SriQ6P069 198 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Duxbl2Q7TNE6 350 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Znf641Q8BZ34 422 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Tmem139E9PX92 214 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Wisp1O54775 367 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Klk1b22P15948 259 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rpl23P62830 140 aaKnown RBP8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm5615Q3UW02 101 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr139Q60891 315 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Tff3Q62395 81 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr399Q7TRX3 311 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr1030Q8VFL5 318 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Prr19B2RW88 366 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm10036E9PYL9 178 aaKnown RBP8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm28044L7N1X0 119 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Tnfrsf26P83626 204 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Adam8Q05910 826 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 MiaQ61865 130 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr411Q7TRW8 315 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Cd300eQ8K249 196 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Chrdl2Q8VEA6 426 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr223Q8VF69 319 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Leprotl1Q9CQ74 131 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Fam213bQ9DB60 201 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 P2ry6Q9ERK9 328 aa8.42□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr918E9PVZ7 325 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gstp2P46425 210 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 TgfaP48030 159 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rpl8P62918 257 aaKnown RBP8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Ccl7Q03366 97 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Zglp1Q1WG82 266 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr149Q60888 311 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Sox21Q811W0 276 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 AamdcQ8R0P4 122 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Mrpl51Q9CPY1 128 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Prr15Q9D1T5 122 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Cd200r1Q9ES57 326 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Fam208bQ5DTT3 2382 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Trav3n-3A0A0G2JEM0 114 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Sc5dO88822 299 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Nkx3-1P97436 237 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Megf10Q6DIB5 1147 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr1183Q8VFF8 303 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gatad1Q920S3 266 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Mrpl42Q9CPV3 142 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 H2afb1Q9CQ70 111 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Prss22Q9ER10 306 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Wnt5aP22725 380 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rpl31P62900 125 aaKnown RBP8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 GfralQ6SJE0 393 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Crispld2Q8BZQ2 495 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Cox19Q8K0C8 92 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 PdfS4R2K0 231 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Trbv1A0A0B4J1G7 116 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rpl30P62889 115 aaKnown RBP8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Supt4h1aP63271 117 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Tctn2Q2MV57 700 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Ldlrad2Q3V0V0 142 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rtp3Q5QGU6 474 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Plppr1Q8BFZ2 325 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Hist3h2bbQ8CGP0 126 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr482Q8VG03 323 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Sfxn3Q91V61 321 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Hist3h2baQ9D2U9 126 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Ndufb8Q9D6J5 186 aa8.41□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Rps20P60867 119 aaKnown RBP8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm9Q3UKW5 162 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Pate2Q3UW31 111 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Q3UZV7 1028 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Trappc1Q5NCF2 145 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Slc25a35Q5SWT3 300 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 RpeQ8VEE0 228 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Vmn1r61W4VSP5 300 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm6970F7DCP6 221 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Gm2381G3UY53 305 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 SellP18337 372 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 P18529 117 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Cd81P35762 236 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Atg101Q9D8Z6 218 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Fbln5Q9WVH9 448 aa8.4□□□□□ -1.06
Ldlr-201ENSMUST00000034713 Olfr175-ps1A0A140T8K4 308 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Igh-3P01867 404 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Defa9P50707 93 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Pdlim4P70271 330 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Spink11Q09TK7 88 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Trdv4Q5R1A3 115 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Olfr147Q60886 317 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Try10Q792Z1 246 aaKnown RBP8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Shisal2bQ9D1Y9 158 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Cbln1Q9R171 193 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Plxna2P70207 1894 aa8.4□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm14408E9Q6B9 136 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm21775J3KMK6 180 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm21900J3QP38 180 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Hist1h2bfP10853 126 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Gm11110Q3U4K9 109 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Hist1h2bbQ64475 126 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Defa22Q8C1N8 93 aa8.39□□□□□ -1.07
Ldlr-201ENSMUST00000034713 Hist1h2bkQ8CGP1 126 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 36 ms