RNA–Protein interactions for RNA: ENST00000487689.1

UBR3-211, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 3

Gene UBR3, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-211ENST00000487689 HIST1H2BHQ93079 126 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 ISOC1Q96CN7 298 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 ADAT3Q96EY9 351 aaPredicted RBP2.03□□□□□ -2.08
UBR3-211ENST00000487689 HIST1H2BNQ99877 126 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 HIST1H2BMQ99879 126 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 RNF5Q99942 180 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 RTL8AQ9BWD3 113 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 MND1Q9BWT6 205 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 TTTY12Q9BZ98 90 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 TPT1P8Q9HAU6 139 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 SNX12Q9UMY4 172 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 LINC00588Q9Y4M8 146 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 TNXBP22105 4242 aa2.03□□□□□ -2.08
UBR3-211ENST00000487689 ARFGEF3Q5TH69 2177 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 GPR98Q8WXG9 6306 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 A8MWP4 228 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 B4DSR2 109 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 CLDN25C9JDP6 229 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 I3L521 148 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 SLC25A20O43772 301 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 CST8O60676 142 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 BANF1O75531 89 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 SULT1C4O75897 302 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LY6G6CO95867 125 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 C1QAP02745 245 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 PRM2P04554 102 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LINC00869P0C866 280 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 OGNP20774 298 aaKnown RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 RPL27AP46776 148 aaKnown RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 CSN1S1P47710 185 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 GABRA2P47869 451 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 FXYD7P58549 80 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 RPS11P62280 158 aaKnown RBP eCLIP2.02□□□□□ -2.09
UBR3-211ENST00000487689 HIST1H4AP62805 103 aaKnown RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 AKR1C1Q04828 323 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 BAMBIQ13145 260 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LY6EQ16553 131 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LTC4SQ16873 150 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LGALS9BQ3B8N2 356 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LGALS9CQ6DKI2 356 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 SLC25A34Q6PIV7 304 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 Q6ZQT7 251 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 SSX8Q7RTT4 187 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 EXOC3-AS1Q8N2X6 119 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 ZNF709Q8N972 641 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 H1FXQ92522 213 aaKnown RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 RBPMSQ93062 196 aaKnown RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 TM2D3Q9BRN9 247 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 OR2J1Q9GZK6 312 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 C11orf1Q9H5F2 150 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 TUBA4BQ9H853 241 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 LINC00574Q9H8X3 128 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 COPZ2Q9P299 210 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 AMMECR1Q9Y4X0 333 aaPredicted RBP2.02□□□□□ -2.09
UBR3-211ENST00000487689 FAT3Q8TDW7 4589 aa2.02□□□□□ -2.09
UBR3-211ENST00000487689 TRAV36DV7A0A075B6V5 113 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 A0A087WX48 190 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 TRGV5A0A0B4J1U4 118 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 TMEM189A5PLL7 270 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 A6NED7 52 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 C17orf51A8MQB3 221 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 H3BMM0 161 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 J3KT08 172 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 IGKV1D-33P01593 117 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 IGKV1-33P01594 117 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 TRGV3P03979 118 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 IGLV7-43P04211 117 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 IL4P05112 153 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 COX4I1P13073 169 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 CRYBB3P26998 211 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 CD200P41217 278 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 RBM11P57052 281 aaKnown RBP2.01□□□□□ -2.09
UBR3-211ENST00000487689 PSG9Q00887 426 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 ZNF816Q0VGE8 651 aaPredicted RBP2.01□□□□□ -2.09
UBR3-211ENST00000487689 RRN3P1Q2M238 152 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 NCMAPQ5T1S8 102 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 LELP1Q5T871 98 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 RASL11AQ6T310 242 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 LCA10Q71F78 164 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 RPS19BP1Q86WX3 136 aaKnown RBP2.01□□□□□ -2.09
UBR3-211ENST00000487689 LRRC28Q86X40 367 aaPredicted RBP2.01□□□□□ -2.09
UBR3-211ENST00000487689 C10orf126Q8N4M7 172 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 APCDD1LQ8NCL9 501 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 OR8J3Q8NGG0 315 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 OR51T1Q8NGJ9 327 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 UBALD1Q8TB05 177 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 C1orf54Q8WWF1 131 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 UBE2WQ96B02 151 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 MGLLQ99685 303 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 IL36BQ9NZH7 164 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 FUT9Q9Y231 359 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 ICOSQ9Y6W8 199 aa2.01□□□□□ -2.09
UBR3-211ENST00000487689 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
UBR3-211ENST00000487689 NCKAP5O14513 1909 aa2□□□□□ -2.09
UBR3-211ENST00000487689 RFPL4AA6NLU0 287 aa2□□□□□ -2.09
UBR3-211ENST00000487689 A8MWP6 167 aa2□□□□□ -2.09
UBR3-211ENST00000487689 RFPL4AL1F8VTS6 287 aa2□□□□□ -2.09
UBR3-211ENST00000487689 LECT2O14960 151 aa2□□□□□ -2.09
UBR3-211ENST00000487689 SMIM24O75264 130 aa2□□□□□ -2.09
UBR3-211ENST00000487689 MSMBP08118 114 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms