RNA–Protein interactions for RNA: YPR173C

VPS4, Transcript of AAA-ATPase involved in multivesicular body (MVB) protein sorting, yeastyeast

Gene VPS4, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS4YPR173C PRK1P40494 810 aa6.2□□□□□ -1.42
VPS4YPR173C SET2P46995 733 aaKnown RBP6.2□□□□□ -1.42
VPS4YPR173C CAF120P53836 1060 aa6.2□□□□□ -1.42
VPS4YPR173C KTR5P53966 522 aaPredicted RBP6.2□□□□□ -1.42
VPS4YPR173C PTA1Q01329 785 aaPredicted RBP6.2□□□□□ -1.42
VPS4YPR173C RPM2Q02773 1202 aa6.2□□□□□ -1.42
VPS4YPR173C YVC1Q12324 675 aa6.2□□□□□ -1.42
VPS4YPR173C RRD2Q12461 358 aa6.2□□□□□ -1.42
VPS4YPR173C ARP6Q12509 438 aa6.2□□□□□ -1.42
VPS4YPR173C YDR461C-AQ2V2P7 80 aa6.2□□□□□ -1.42
VPS4YPR173C ILS1P09436 1072 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C AEP2P22136 580 aa6.19□□□□□ -1.42
VPS4YPR173C RET1P22276 1149 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C PRP22P24384 1145 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C MGT1P26188 188 aa6.19□□□□□ -1.42
VPS4YPR173C YSC83P32792 385 aa6.19□□□□□ -1.42
VPS4YPR173C YKU70P32807 602 aa6.19□□□□□ -1.42
VPS4YPR173C SLA2P33338 968 aa6.19□□□□□ -1.42
VPS4YPR173C AST1P35183 429 aa6.19□□□□□ -1.42
VPS4YPR173C YKR078WP36158 585 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C DUG2P38149 878 aa6.19□□□□□ -1.42
VPS4YPR173C CST26P38226 397 aa6.19□□□□□ -1.42
VPS4YPR173C TSC10P38342 320 aa6.19□□□□□ -1.42
VPS4YPR173C MGE1P38523 228 aa6.19□□□□□ -1.42
VPS4YPR173C LAM1P38851 1228 aa6.19□□□□□ -1.42
VPS4YPR173C PDS1P40316 373 aaPredicted RBP6.19□□□□□ -1.42
VPS4YPR173C RLP7P40693 322 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C DIM1P41819 318 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C GSM1P42950 618 aa6.19□□□□□ -1.42
VPS4YPR173C SAE2P46946 345 aa6.19□□□□□ -1.42
VPS4YPR173C FMS1P50264 508 aa6.19□□□□□ -1.42
VPS4YPR173C INP52P50942 1183 aa6.19□□□□□ -1.42
VPS4YPR173C YML6P51998 286 aa6.19□□□□□ -1.42
VPS4YPR173C DIP5P53388 608 aa6.19□□□□□ -1.42
VPS4YPR173C YNR040WP53736 256 aa6.19□□□□□ -1.42
VPS4YPR173C IST1P53843 298 aaPredicted RBP6.19□□□□□ -1.42
VPS4YPR173C ARK1P53974 638 aa6.19□□□□□ -1.42
VPS4YPR173C UFO1Q04511 668 aa6.19□□□□□ -1.42
VPS4YPR173C ORM2Q06144 216 aa6.19□□□□□ -1.42
VPS4YPR173C YDL124WQ07551 312 aaKnown RBP6.19□□□□□ -1.42
VPS4YPR173C YLR053CQ12026 108 aa6.19□□□□□ -1.42
VPS4YPR173C FKS1P38631 1876 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C PGK1P00560 416 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C RPS3P05750 240 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C PHO4P07270 312 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C YAK1P14680 807 aa6.18□□□□□ -1.42
VPS4YPR173C NPP1P25353 742 aa6.18□□□□□ -1.42
VPS4YPR173C AFG2P32794 780 aa6.18□□□□□ -1.42
VPS4YPR173C UGA4P32837 571 aa6.18□□□□□ -1.42
VPS4YPR173C HES1P35843 434 aa6.18□□□□□ -1.42
VPS4YPR173C PAM1P37304 830 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C TOS1P38288 455 aa6.18□□□□□ -1.42
VPS4YPR173C YBP1P38315 674 aa6.18□□□□□ -1.42
VPS4YPR173C MSR1P38714 643 aa6.18□□□□□ -1.42
VPS4YPR173C YHL008CP38750 627 aa6.18□□□□□ -1.42
VPS4YPR173C SMF2P38778 549 aa6.18□□□□□ -1.42
VPS4YPR173C AIM46P38885 310 aa6.18□□□□□ -1.42
VPS4YPR173C YIL165CP40446 119 aa6.18□□□□□ -1.42
VPS4YPR173C RNR4P49723 345 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C SAM37P50110 327 aa6.18□□□□□ -1.42
VPS4YPR173C PAN2P53010 1115 aaPredicted RBP6.18□□□□□ -1.42
VPS4YPR173C SHE10P53075 577 aa6.18□□□□□ -1.42
VPS4YPR173C OSH6Q02201 448 aa6.18□□□□□ -1.42
VPS4YPR173C ERO1Q03103 563 aa6.18□□□□□ -1.42
VPS4YPR173C HEH2Q03281 663 aa6.18□□□□□ -1.42
VPS4YPR173C ADI1Q03677 179 aa6.18□□□□□ -1.42
VPS4YPR173C BSC2Q05611 235 aa6.18□□□□□ -1.42
VPS4YPR173C EMG1Q06287 252 aaKnown RBP6.18□□□□□ -1.42
VPS4YPR173C TRE1Q08919 783 aa6.18□□□□□ -1.42
VPS4YPR173C SLX4Q12098 748 aa6.18□□□□□ -1.42
VPS4YPR173C GET4Q12125 312 aa6.18□□□□□ -1.42
VPS4YPR173C GPM3Q12326 303 aa6.18□□□□□ -1.42
VPS4YPR173C NOT5Q12514 560 aaPredicted RBP6.18□□□□□ -1.42
VPS4YPR173C SSC1P0CS90 654 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C TCP1P12612 559 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C DBP5P20449 482 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C FPS1P23900 669 aa6.17□□□□□ -1.42
VPS4YPR173C AAD3P25612 363 aa6.17□□□□□ -1.42
VPS4YPR173C RPS7AP26786 190 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C MCM5P29496 775 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C ABD1P32783 436 aaPredicted RBP6.17□□□□□ -1.42
VPS4YPR173C SEC66P33754 206 aa6.17□□□□□ -1.42
VPS4YPR173C CSG2P35206 410 aa6.17□□□□□ -1.42
VPS4YPR173C MRP8P35719 219 aa6.17□□□□□ -1.42
VPS4YPR173C CUE2P36075 443 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C FRT2P39734 528 aa6.17□□□□□ -1.42
VPS4YPR173C YER156CP40093 338 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C AIM20P40451 204 aa6.17□□□□□ -1.42
VPS4YPR173C DPH1P40487 425 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C MPH1P40562 993 aa6.17□□□□□ -1.42
VPS4YPR173C TAF1P46677 1066 aa6.17□□□□□ -1.42
VPS4YPR173C PHO86P46956 311 aa6.17□□□□□ -1.42
VPS4YPR173C HLJ1P48353 224 aa6.17□□□□□ -1.42
VPS4YPR173C VMA10P48836 114 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C NOG2P53742 486 aaKnown RBP6.17□□□□□ -1.42
VPS4YPR173C PRM6Q04705 352 aa6.17□□□□□ -1.42
VPS4YPR173C IVY1Q04934 453 aa6.17□□□□□ -1.42
VPS4YPR173C PHM6Q05637 104 aa6.17□□□□□ -1.42
VPS4YPR173C YIG1Q08956 461 aa6.17□□□□□ -1.42
VPS4YPR173C MSH5Q12175 901 aa6.17□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms