RNA–Protein interactions for RNA: YOR276W

CAF20, Transcript of Phosphoprotein of the mRNA cap-binding complex, yeast

Gene CAF20, Length 486 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF20	YOR276W	POM34	Q12445	299 aa		4.3	□□□□□ -1.72
CAF20	YOR276W	MIS1	P09440	975 aa	Known RBP	4.29	□□□□□ -1.72
CAF20	YOR276W	SIR1	P21691	654 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	XRS2	P33301	854 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	YBR138C	P38277	524 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	IFA38	P38286	347 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	YLF2	P38746	405 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	CRG1	P38892	291 aa	RIP-Chip data	4.29	□□□□□ -1.72	not detected
CAF20	YOR276W	LYS9	P38999	446 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	TMA108	P40462	946 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	SPO1	P53541	631 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	RNT1	Q02555	471 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	TMN2	Q04562	672 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	TRI1	Q05024	226 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	YCG1	Q06680	1035 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	IWR1	Q07532	353 aa	Predicted RBP	4.29	□□□□□ -1.72
CAF20	YOR276W	DIA2	Q08496	732 aa	Predicted RBP	4.29	□□□□□ -1.72
CAF20	YOR276W	ACF2	Q12168	779 aa		4.29	□□□□□ -1.72
CAF20	YOR276W	CLF1	Q12309	687 aa	Predicted RBP	4.29	□□□□□ -1.72
CAF20	YOR276W	INH1	P01097	85 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	SNF1	P06782	633 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	ADE3	P07245	946 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	MTF2	P10849	440 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	GUK1	P15454	187 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	TUP1	P16649	713 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	RIT1	P23796	513 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	EHT1	P38295	451 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	CCT3	P39077	534 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	KAP123	P40069	1113 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	FTR1	P40088	404 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	QRI1	P43123	477 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	YDL183C	P48569	320 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	STB4	P50104	949 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	RGC1	Q06108	1083 aa	Known RBP	4.28	□□□□□ -1.72
CAF20	YOR276W	THI22	Q06490	572 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	AAD4	Q07747	329 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	TRM13	Q12383	476 aa		4.28	□□□□□ -1.72
CAF20	YOR276W	PPR1	P07272	904 aa	Predicted RBP	4.27	□□□□□ -1.73
CAF20	YOR276W	PCK1	P10963	549 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	UBC1	P21734	215 aa	Known RBP	4.27	□□□□□ -1.73
CAF20	YOR276W	MUD2	P36084	527 aa	Known RBP	4.27	□□□□□ -1.73
CAF20	YOR276W	SET3	P36124	751 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	COS111	P38308	924 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	SFB3	P38810	929 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	AXL2	P38928	823 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	NDE1	P40215	560 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	YIL077C	P40508	320 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	RRT6	P53117	311 aa	Predicted RBP	4.27	□□□□□ -1.73
CAF20	YOR276W	TIM50	Q02776	476 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	VID22	Q05934	901 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	TRM8	Q12009	286 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	AIM41	Q12032	185 aa		4.27	□□□□□ -1.73
CAF20	YOR276W	ALG7	P07286	448 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	HSC82	P15108	705 aa	Known RBP	4.26	□□□□□ -1.73
CAF20	YOR276W	PEX1	P24004	1043 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	RPT3	P33298	428 aa	Known RBP	4.26	□□□□□ -1.73
CAF20	YOR276W	STB5	P38699	743 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	FMO1	P38866	432 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	FAF1	P40546	346 aa	Predicted RBP	4.26	□□□□□ -1.73
CAF20	YOR276W	GSM1	P42950	618 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	STU2	P46675	888 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	TIM44	Q01852	431 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	ENT1	Q12518	454 aa		4.26	□□□□□ -1.73
CAF20	YOR276W	LAT1	P12695	482 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	SAN1	P22470	610 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	FEN2	P25621	512 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	RPS7A	P26786	190 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	FRD1	P32614	470 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	UME6	P39001	836 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	NUP60	P39705	539 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	DPH1	P40487	425 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	CAB2	P40506	365 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	POL31	P46957	487 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	SAP4	P53036	818 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	MUK1	Q02866	612 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	YMR206W	Q03695	313 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	ARA2	Q04212	335 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	YFT2	Q06676	274 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	CSR1	Q06705	408 aa	Known RBP	4.25	□□□□□ -1.73
CAF20	YOR276W	CRD1	Q07560	283 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	IRC10	Q08118	586 aa		4.25	□□□□□ -1.73
CAF20	YOR276W	LEU2	P04173	364 aa	Predicted RBP	4.24	□□□□□ -1.73
CAF20	YOR276W	BET2	P20133	325 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	RAD16	P31244	790 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	MVD1	P32377	396 aa	Known RBP	4.24	□□□□□ -1.73
CAF20	YOR276W	BCS1	P32839	456 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	MFT1	P33441	392 aa	Known RBP	4.24	□□□□□ -1.73
CAF20	YOR276W	MRPL36	P36531	177 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	YEL068C	P39977	110 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	TMN3	P40071	706 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	VFA1	P40080	203 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	HOS4	P40480	1083 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	YIR042C	P40586	236 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	RFX1	P48743	811 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	CTF18	P49956	741 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	MUP1	P50276	574 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	ESF2	P53743	316 aa	Known RBP	4.24	□□□□□ -1.73
CAF20	YOR276W	CBK1	P53894	756 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	TRS31	Q03337	283 aa		4.24	□□□□□ -1.73
CAF20	YOR276W	GIR2	Q03768	265 aa	Predicted RBP	4.24	□□□□□ -1.73

Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms