RNA–Protein interactions for RNA: YOR239W

ABP140, Transcript of AdoMet-dependent tRNA methyltransferase and actin binding protein, yeast

Gene ABP140, Length 1,887 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
ABP140	YOR239W	RPT5	P33297	434 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	AFR1	P33304	620 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	CLG1	P35190	452 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	YET1	P35723	206 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	ECM21	P38167	1117 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	ERP5	P38819	212 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	RCY1	P39531	840 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	DDI1	P40087	428 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	PCI8	P40512	444 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	BUD6	P41697	788 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	YNL320W	P42840	284 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	BNA3	P47039	444 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	BIR1	P47134	954 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	VMA10	P48836	114 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	ZRG17	P53735	605 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	IMP4	P53941	290 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	ALD6	P54115	500 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	SOV1	Q04748	898 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	PHM6	Q05637	104 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	YCS4	Q06156	1176 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	MLC2	Q06580	163 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	DIS3	Q08162	1001 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	GAS4	Q08271	471 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	TRM11	Q12463	433 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	YLR278C	Q05854	1341 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	CYB2	P00175	591 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	SIR3	P06701	978 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	RAP1	P11938	827 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
ABP140	YOR239W	ALG1	P16661	449 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	HNM1	P19807	563 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	AMS1	P22855	1083 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	ZIP1	P31111	875 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	FRD1	P32614	470 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	LRG1	P35688	1017 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	MYO3	P36006	1272 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	UBP11	P36026	717 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	IES5	P40060	125 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	SBE2	P42223	864 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	YKE2	P52553	114 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	MAL11	P53048	616 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	MRPS35	P53292	345 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	VAC7	P53950	1165 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	UBP2	Q01476	1272 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	RPT6	Q01939	405 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	ACL4	Q03771	387 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	BUD22	Q04347	519 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	URC2	Q04411	772 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	YMR114C	Q04471	368 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	ATG38	Q05789	226 aa	Known RBP	3.88	□□□□□ -1.79
ABP140	YOR239W	FRA1	Q07825	749 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	HUA2	Q12134	243 aa		3.88	□□□□□ -1.79
ABP140	YOR239W	HXK1	P04806	485 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	MCM3	P24279	971 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	POL4	P25615	582 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	GRX4	P32642	244 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	HES1	P35843	434 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	SET3	P36124	751 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	RDH54	P38086	958 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	MAK5	P38112	773 aa	Predicted RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	ECM31	P38122	312 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	RFS1	P38234	210 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	TIF5	P38431	405 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	RFC3	P38629	340 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	ERP2	P39704	215 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	YTA12	P40341	825 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	FIG4	P42837	879 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	EMW1	P42842	904 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	MIG2	P53035	382 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	YGR016W	P53209	190 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	YGR122W	P53272	402 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	ARC35	P53731	342 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	NAF1	P53919	492 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	MAK10	Q02197	733 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	RAD30	Q04049	632 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	DBP9	Q06218	594 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	GIC2	Q06648	383 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	TRE1	Q08919	783 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	TMA46	Q12000	345 aa	Known RBP	3.87	□□□□□ -1.79
ABP140	YOR239W	NSI1	Q12457	570 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	APC1	P53886	1748 aa		3.87	□□□□□ -1.79
ABP140	YOR239W	CHO2	P05374	869 aa	Known RBP	3.86	□□□□□ -1.79
ABP140	YOR239W	HMG2	P12684	1045 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	ATR1	P13090	542 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	CLN3	P13365	580 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	RGP1	P16664	663 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	CAD1	P24813	409 aa	Known RBP	3.86	□□□□□ -1.79
ABP140	YOR239W	PWP2	P25635	923 aa	Known RBP	3.86	□□□□□ -1.79
ABP140	YOR239W	PRR1	P28708	518 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	SAC6	P32599	642 aa	Known RBP	3.86	□□□□□ -1.79
ABP140	YOR239W	FBP26	P32604	452 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	RAD24	P32641	659 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	YBL010C	P32788	280 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	TEF4	P36008	412 aa	Known RBP	3.86	□□□□□ -1.79
ABP140	YOR239W	PPS1	P38148	807 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	TDP1	P38319	544 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	GDH3	P39708	457 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	BOL3	P39724	118 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	RTT105	P40063	208 aa		3.86	□□□□□ -1.79
ABP140	YOR239W	VFA1	P40080	203 aa		3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms