RNA–Protein interactions for RNA: YOR204W

DED1, Transcript of ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase, yeast

Gene DED1, Length 1,815 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DED1	YOR204W	CCP1	P00431	361 aa		12.05	□□□□□ -0.48
DED1	YOR204W	YIH1	P25637	258 aa		12.05	□□□□□ -0.48
DED1	YOR204W	CDC27	P38042	758 aa		12.05	□□□□□ -0.48
DED1	YOR204W	VHC1	P38329	1120 aa		12.05	□□□□□ -0.48
DED1	YOR204W	UTP8	P53276	713 aa	Known RBP	12.05	□□□□□ -0.48
DED1	YOR204W	YNL108C	P53929	270 aa		12.05	□□□□□ -0.48
DED1	YOR204W	YPQ1	Q12010	308 aa		12.05	□□□□□ -0.48
DED1	YOR204W	SSP1	P38871	571 aa		12.04	□□□□□ -0.48
DED1	YOR204W	YNL247W	P53852	767 aa	Known RBP	12.04	□□□□□ -0.48
DED1	YOR204W	YVH1	Q02256	364 aa	Known RBP	12.04	□□□□□ -0.48
DED1	YOR204W	AIM32	Q04689	311 aa		12.04	□□□□□ -0.48
DED1	YOR204W	AAD4	Q07747	329 aa		12.04	□□□□□ -0.48
DED1	YOR204W	QCR6	P00127	147 aa		12.04	□□□□□ -0.48
DED1	YOR204W	MET16	P18408	261 aa	Predicted RBP	12.04	□□□□□ -0.48
DED1	YOR204W	LAS1	P36146	502 aa	Predicted RBP	12.04	□□□□□ -0.48
DED1	YOR204W	CNN1	P43618	361 aa		12.04	□□□□□ -0.48
DED1	YOR204W	CIR2	Q08822	631 aa		12.04	□□□□□ -0.48
DED1	YOR204W	CDC8	P00572	216 aa		12.03	□□□□□ -0.48
DED1	YOR204W	SFB3	P38810	929 aa		12.03	□□□□□ -0.48
DED1	YOR204W	PEX31	P53203	462 aa		12.03	□□□□□ -0.48
DED1	YOR204W	PIG1	Q06216	648 aa		12.03	□□□□□ -0.48
DED1	YOR204W	PMT7	Q06644	662 aa		12.03	□□□□□ -0.48
DED1	YOR204W	FAP7	Q12055	197 aa	Predicted RBP	12.03	□□□□□ -0.48
DED1	YOR204W	LPX1	Q12405	387 aa	Known RBP	12.03	□□□□□ -0.48
DED1	YOR204W	CBF1	P17106	351 aa		12.02	□□□□□ -0.48
DED1	YOR204W	FSH1	P38777	243 aa	Known RBP	12.02	□□□□□ -0.48
DED1	YOR204W	YGR127W	P53275	312 aa		12.02	□□□□□ -0.48
DED1	YOR204W	PIR3	Q03180	325 aa		12.02	□□□□□ -0.48
DED1	YOR204W	BSP1	Q06604	576 aa		12.02	□□□□□ -0.48
DED1	YOR204W	CDC24	P11433	854 aa	Predicted RBP	12.02	□□□□□ -0.49
DED1	YOR204W	URA8	P38627	578 aa	Predicted RBP	12.02	□□□□□ -0.49
DED1	YOR204W	BTT1	P40314	149 aa	Predicted RBP	12.02	□□□□□ -0.49
DED1	YOR204W	SND1	Q04007	877 aa		12.02	□□□□□ -0.49
DED1	YOR204W	YOR387C	Q08910	206 aa		12.02	□□□□□ -0.49
DED1	YOR204W	RRD2	Q12461	358 aa		12.02	□□□□□ -0.49
DED1	YOR204W	UBC6	P33296	250 aa	Predicted RBP	12.01	□□□□□ -0.49
DED1	YOR204W	TPO1	Q07824	586 aa		12.01	□□□□□ -0.49
DED1	YOR204W	MGT1	P26188	188 aa		12	□□□□□ -0.49
DED1	YOR204W	SYN8	P31377	255 aa		12	□□□□□ -0.49
DED1	YOR204W	DUG2	P38149	878 aa		12	□□□□□ -0.49
DED1	YOR204W	OLA1	P38219	394 aa	Known RBP	12	□□□□□ -0.49
DED1	YOR204W	YBP1	P38315	674 aa		12	□□□□□ -0.49
DED1	YOR204W	PRM9	P39551	298 aa		12	□□□□□ -0.49
DED1	YOR204W	NUP60	P39705	539 aa		12	□□□□□ -0.49
DED1	YOR204W	STL1	P39932	569 aa		12	□□□□□ -0.49
DED1	YOR204W	SAP1	P39955	897 aa	Known RBP	12	□□□□□ -0.49
DED1	YOR204W	TRM112	P53738	135 aa	Predicted RBP	12	□□□□□ -0.49
DED1	YOR204W	HSF1	P10961	833 aa		12	□□□□□ -0.49
DED1	YOR204W	PEX28	P38848	579 aa		12	□□□□□ -0.49
DED1	YOR204W	LAM1	P38851	1228 aa		12	□□□□□ -0.49
DED1	YOR204W	AIM18	P38884	321 aa		12	□□□□□ -0.49
DED1	YOR204W	RGD2	P43556	714 aa		12	□□□□□ -0.49
DED1	YOR204W	RFX1	P48743	811 aa		12	□□□□□ -0.49
DED1	YOR204W	COQ6	P53318	479 aa		12	□□□□□ -0.49
DED1	YOR204W	PNP1	Q05788	311 aa		12	□□□□□ -0.49
DED1	YOR204W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	12	□□□□□ -0.49	not detected
DED1	YOR204W	RIO1	Q12196	484 aa	Known RBP	12	□□□□□ -0.49
DED1	YOR204W	NOP58	Q12499	511 aa	Known RBP	12	□□□□□ -0.49
DED1	YOR204W	GCR1	P07261	785 aa		11.99	□□□□□ -0.49
DED1	YOR204W	APE1	P14904	514 aa		11.99	□□□□□ -0.49
DED1	YOR204W	PEX34	P25584	144 aa		11.99	□□□□□ -0.49
DED1	YOR204W	PLC1	P32383	869 aa		11.99	□□□□□ -0.49
DED1	YOR204W	ISF1	P32488	338 aa		11.99	□□□□□ -0.49
DED1	YOR204W	DEF1	P35732	738 aa	Known RBP	11.99	□□□□□ -0.49
DED1	YOR204W	POP4	P38336	279 aa		11.99	□□□□□ -0.49
DED1	YOR204W	SAF1	P38352	637 aa		11.99	□□□□□ -0.49
DED1	YOR204W	EDC3	P39998	551 aa	Known RBP	11.99	□□□□□ -0.49
DED1	YOR204W	ATM1	P40416	690 aa		11.99	□□□□□ -0.49
DED1	YOR204W	SNG1	P46950	547 aa		11.99	□□□□□ -0.49
DED1	YOR204W	YML002W	P0CF17	737 aa		11.98	□□□□□ -0.49
DED1	YOR204W	ECM13	P38195	257 aa		11.98	□□□□□ -0.49
DED1	YOR204W	BIT2	P38346	545 aa		11.98	□□□□□ -0.49
DED1	YOR204W	DIA4	P38705	446 aa	Predicted RBP	11.98	□□□□□ -0.49
DED1	YOR204W	EMW1	P42842	904 aa	Known RBP	11.98	□□□□□ -0.49
DED1	YOR204W	SVS1	Q12254	260 aa		11.98	□□□□□ -0.49
DED1	YOR204W	ADY2	P25613	283 aa		11.97	□□□□□ -0.49
DED1	YOR204W	SPP381	P38282	291 aa	Predicted RBP	11.97	□□□□□ -0.49
DED1	YOR204W	PPE1	P38796	400 aa		11.97	□□□□□ -0.49
DED1	YOR204W	HLJ1	P48353	224 aa		11.97	□□□□□ -0.49
DED1	YOR204W	RPN4	Q03465	531 aa		11.97	□□□□□ -0.49
DED1	YOR204W	GPM3	Q12326	303 aa		11.97	□□□□□ -0.49
DED1	YOR204W	ENO2	P00925	437 aa	Known RBP	11.97	□□□□□ -0.49
DED1	YOR204W	HMG2	P12684	1045 aa		11.97	□□□□□ -0.49
DED1	YOR204W	PEP5	P12868	1029 aa		11.97	□□□□□ -0.49
DED1	YOR204W	PPH22	P23595	377 aa		11.97	□□□□□ -0.49
DED1	YOR204W	TPS2	P31688	896 aa	Known RBP	11.97	□□□□□ -0.49
DED1	YOR204W	KTR7	P40504	517 aa		11.97	□□□□□ -0.49
DED1	YOR204W	RPS10B	P46784	105 aa	Known RBP	11.97	□□□□□ -0.49
DED1	YOR204W	BFA1	P47113	574 aa		11.97	□□□□□ -0.49
DED1	YOR204W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	11.97	□□□□□ -0.49	not detected
DED1	YOR204W	SGO1	Q08490	590 aa		11.97	□□□□□ -0.49
DED1	YOR204W	RPS10A	Q08745	105 aa	Predicted RBP	11.97	□□□□□ -0.49
DED1	YOR204W	YLL056C	Q12177	298 aa		11.97	□□□□□ -0.49
DED1	YOR204W	EFG1	Q3E705	233 aa	Known RBP	11.97	□□□□□ -0.49
DED1	YOR204W	YKL068W-A	Q3E826	78 aa		11.97	□□□□□ -0.49
DED1	YOR204W	AI5_ALPHA	Q9ZZX1	630 aa		11.97	□□□□□ -0.49
DED1	YOR204W	CMD1	P06787	147 aa	Known RBP	11.96	□□□□□ -0.49
DED1	YOR204W	MTF1	P14908	341 aa	Known RBP	11.96	□□□□□ -0.49
DED1	YOR204W	COQ8	P27697	501 aa		11.96	□□□□□ -0.49
DED1	YOR204W	MET22	P32179	357 aa		11.96	□□□□□ -0.49

Retrieved 100 of 5,963 RNA–protein pairs in 11 ms