RNA–Protein interactions for RNA: YOR156C

NFI1, Transcript of SUMO E3 ligase, yeast

Gene NFI1, Length 2,181 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NFI1	YOR156C	USV1	Q12132	391 aa		5.79	□□□□□ -1.48
NFI1	YOR156C	MRS6	P32864	603 aa	Known RBP	5.78	□□□□□ -1.48
NFI1	YOR156C	YHR097C	P38809	366 aa	Known RBP	5.78	□□□□□ -1.48
NFI1	YOR156C	ERR3	P42222	437 aa		5.78	□□□□□ -1.48
NFI1	YOR156C	FUB1	P25659	250 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	YEL025C	P39991	1188 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	VPS27	P40343	622 aa	Known RBP	5.77	□□□□□ -1.49
NFI1	YOR156C	AIM21	P40563	679 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	SAP185	P40856	1058 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	ACS1	Q01574	713 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	ECM16	Q04217	1267 aa	Known RBP	5.77	□□□□□ -1.49
NFI1	YOR156C	URN1	Q06525	465 aa	Known RBP	5.77	□□□□□ -1.49
NFI1	YOR156C	VPS33	P20795	691 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	DPB3	P27344	201 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	SWE1	P32944	819 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	EXO84	P38261	753 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	CPR6	P53691	371 aa	Known RBP	5.77	□□□□□ -1.49
NFI1	YOR156C	AAD4	Q07747	329 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	PSR2	Q07949	397 aa		5.77	□□□□□ -1.49
NFI1	YOR156C	PRP45	P28004	379 aa	Predicted RBP	5.76	□□□□□ -1.49
NFI1	YOR156C	POL31	P46957	487 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	MSE1	P48525	536 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	YGR151C	P53287	111 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	SSL2	Q00578	843 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	CRD1	Q07560	283 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	MCM3	P24279	971 aa	Known RBP	5.76	□□□□□ -1.49
NFI1	YOR156C	FRD1	P32614	470 aa	Known RBP	5.76	□□□□□ -1.49
NFI1	YOR156C	ELF1	P36053	145 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	MRPL7	P36519	292 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	YHL017W	P38745	532 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	SMX3	P54999	86 aa	Predicted RBP	5.76	□□□□□ -1.49
NFI1	YOR156C	YMR206W	Q03695	313 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	YDL086W	Q07505	273 aa		5.76	□□□□□ -1.49
NFI1	YOR156C	PCK1	P10963	549 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	SIR1	P21691	654 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	YJL193W	P39542	402 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	SNF12	P53628	566 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	MUK1	Q02866	612 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	EFR3	Q03653	782 aa	Known RBP	5.75	□□□□□ -1.49
NFI1	YOR156C	PUS9	Q12069	462 aa		5.75	□□□□□ -1.49
NFI1	YOR156C	TUB2	P02557	457 aa	Known RBP	5.74	□□□□□ -1.49
NFI1	YOR156C	CHS7	P38843	316 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	ATG4	P53867	494 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	SVL3	Q03088	825 aa	Known RBP	5.74	□□□□□ -1.49
NFI1	YOR156C	YSH1	Q06224	779 aa	Predicted RBP	5.74	□□□□□ -1.49
NFI1	YOR156C	PHO5	P00635	467 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	ABF1	P14164	731 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	POL3	P15436	1097 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	STB5	P38699	743 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	PCL5	P38794	229 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	PUG1	P40100	303 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	ENT2	Q05785	613 aa		5.74	□□□□□ -1.49
NFI1	YOR156C	IWR1	Q07532	353 aa	Predicted RBP	5.74	□□□□□ -1.49
NFI1	YOR156C	BUD21	Q08492	214 aa	Predicted RBP	5.74	□□□□□ -1.49
NFI1	YOR156C	PPE1	P38796	400 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	COS12	P53053	380 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	DIP5	P53388	608 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	SEC12	P11655	471 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	NCP1	P16603	691 aa	Known RBP	5.73	□□□□□ -1.49
NFI1	YOR156C	KSP1	P38691	1029 aa	Known RBP	5.73	□□□□□ -1.49
NFI1	YOR156C	ARC35	P53731	342 aa	Known RBP	5.73	□□□□□ -1.49
NFI1	YOR156C	TRS31	Q03337	283 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	TRS130	Q03660	1102 aa		5.73	□□□□□ -1.49
NFI1	YOR156C	DHR2	P36009	735 aa	Predicted RBP	5.72	□□□□□ -1.49
NFI1	YOR156C	VFA1	P40080	203 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	NMA2	P53204	395 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	SLI1	P53304	468 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	USA1	Q03714	838 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	BLS1	Q06071	122 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	GFA1	P14742	717 aa	Known RBP	5.72	□□□□□ -1.49
NFI1	YOR156C	CAP1	P28495	268 aa	Known RBP	5.72	□□□□□ -1.49
NFI1	YOR156C	NDC80	P40460	691 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	SUB1	P54000	292 aa	Known RBP	5.72	□□□□□ -1.49
NFI1	YOR156C	ACF2	Q12168	779 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	RKI1	Q12189	258 aa		5.72	□□□□□ -1.49
NFI1	YOR156C	DSS4	P32601	143 aa		5.71	□□□□□ -1.5
NFI1	YOR156C	APL3	P38065	1025 aa		5.71	□□□□□ -1.5
NFI1	YOR156C	CBR1	P38626	284 aa	Known RBP	5.71	□□□□□ -1.5
NFI1	YOR156C	YML131W	Q03102	365 aa		5.71	□□□□□ -1.5
NFI1	YOR156C	UFO1	Q04511	668 aa		5.71	□□□□□ -1.5
NFI1	YOR156C	ADE3	P07245	946 aa	Known RBP	5.7	□□□□□ -1.5
NFI1	YOR156C	SWI4	P25302	1093 aa	Known RBP	5.7	□□□□□ -1.5
NFI1	YOR156C	CTR1	P49573	406 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	STB4	P50104	949 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	RPS15	Q01855	142 aa	Known RBP	5.7	□□□□□ -1.5
NFI1	YOR156C	MIS1	P09440	975 aa	Known RBP	5.7	□□□□□ -1.5
NFI1	YOR156C	PRE2	P30656	287 aa	Known RBP	5.7	□□□□□ -1.5
NFI1	YOR156C	BEM3	P32873	1128 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	ARG2	P40360	574 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	HOF1	Q05080	669 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	AIM6	Q07716	390 aa		5.7	□□□□□ -1.5
NFI1	YOR156C	YCL049C	P25577	312 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	YBR138C	P38277	524 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	BMS1	Q08965	1183 aa	Known RBP	5.69	□□□□□ -1.5
NFI1	YOR156C	ICL2	Q12031	575 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	MTF2	P10849	440 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	STE4	P18851	423 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	RIT1	P23796	513 aa		5.69	□□□□□ -1.5
NFI1	YOR156C	CCT7	P42943	550 aa	Known RBP	5.69	□□□□□ -1.5
NFI1	YOR156C	IMA1	P53051	589 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 19.7 ms