RNA–Protein interactions for RNA: YOR129C

AFI1, Transcript of Arf3p polarization-specific docking factor, yeastyeast

Gene AFI1, Length 2,682 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFI1YOR129C BFR1P38934 470 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
AFI1YOR129C YMR124WP39523 943 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C NDE1P40215 560 aa2.47□□□□□ -2.01
AFI1YOR129C MNT3P40549 630 aa2.47□□□□□ -2.01
AFI1YOR129C ENP2P48234 707 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C YDL183CP48569 320 aa2.47□□□□□ -2.01
AFI1YOR129C PEF1P53238 335 aa2.47□□□□□ -2.01
AFI1YOR129C COX18P53239 316 aa2.47□□□□□ -2.01
AFI1YOR129C NNF2P53253 936 aa2.47□□□□□ -2.01
AFI1YOR129C MEP3P53390 489 aa2.47□□□□□ -2.01
AFI1YOR129C CPR6P53691 371 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C YDR132CQ03900 495 aa2.47□□□□□ -2.01
AFI1YOR129C RXT3Q07458 294 aa2.47□□□□□ -2.01
AFI1YOR129C PSR1Q07800 427 aa2.47□□□□□ -2.01
AFI1YOR129C YPL191CQ08930 360 aa2.47□□□□□ -2.01
AFI1YOR129C PCL8Q08966 492 aa2.47□□□□□ -2.01
AFI1YOR129C NEW1Q08972 1196 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C YRM1Q12340 786 aa2.47□□□□□ -2.01
AFI1YOR129C ATG11Q12527 1178 aa2.47□□□□□ -2.01
AFI1YOR129C GLT1Q12680 2145 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C RED1P14291 827 aa2.47□□□□□ -2.01
AFI1YOR129C ARC19P33204 171 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C CRG1P38892 291 aaRIP-Chip data2.47□□□□□ -2.01not detected
AFI1YOR129C LYS9P38999 446 aa2.47□□□□□ -2.01
AFI1YOR129C ECM1P39715 212 aa2.47□□□□□ -2.01
AFI1YOR129C AIM20P40451 204 aa2.47□□□□□ -2.01
AFI1YOR129C PRM2P40534 656 aa2.47□□□□□ -2.01
AFI1YOR129C ERG5P54781 538 aa2.47□□□□□ -2.01
AFI1YOR129C VBA4Q04602 768 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C YLR224WQ05947 369 aa2.47□□□□□ -2.01
AFI1YOR129C ACK1Q07622 623 aaPredicted RBP2.47□□□□□ -2.01
AFI1YOR129C RIX7Q07844 837 aaKnown RBP2.47□□□□□ -2.01
AFI1YOR129C LAS17Q12446 633 aa2.47□□□□□ -2.01
AFI1YOR129C TRM11Q12463 433 aa2.47□□□□□ -2.01
AFI1YOR129C SSM4P40318 1319 aa2.47□□□□□ -2.01
AFI1YOR129C URA3P03962 267 aa2.46□□□□□ -2.01
AFI1YOR129C RPP2AP05319 106 aaKnown RBP2.46□□□□□ -2.01
AFI1YOR129C POL3P15436 1097 aa2.46□□□□□ -2.01
AFI1YOR129C CWH43P25618 953 aa2.46□□□□□ -2.01
AFI1YOR129C SSP120P39931 234 aaKnown RBP2.46□□□□□ -2.01
AFI1YOR129C OCA1P50946 238 aaPredicted RBP2.46□□□□□ -2.01
AFI1YOR129C MTL1P53214 551 aa2.46□□□□□ -2.01
AFI1YOR129C ACS1Q01574 713 aa2.46□□□□□ -2.01
AFI1YOR129C TAP42Q04372 366 aa2.46□□□□□ -2.01
AFI1YOR129C TFC6Q06339 672 aa2.46□□□□□ -2.01
AFI1YOR129C CLP1Q08685 445 aaPredicted RBP2.46□□□□□ -2.01
AFI1YOR129C YOR352WQ08816 343 aa2.46□□□□□ -2.01
AFI1YOR129C TRM8Q12009 286 aa2.46□□□□□ -2.01
AFI1YOR129C DFG16Q99234 619 aa2.46□□□□□ -2.01
AFI1YOR129C SNF1P06782 633 aaKnown RBP2.46□□□□□ -2.02
AFI1YOR129C ERG20P08524 352 aaKnown RBP2.46□□□□□ -2.02
AFI1YOR129C SWI4P25302 1093 aaKnown RBP2.46□□□□□ -2.02
AFI1YOR129C PGS1P25578 521 aa2.46□□□□□ -2.02
AFI1YOR129C SPC110P32380 944 aa2.46□□□□□ -2.02
AFI1YOR129C NUP120P35729 1037 aa2.46□□□□□ -2.02
AFI1YOR129C SET3P36124 751 aa2.46□□□□□ -2.02
AFI1YOR129C POL12P38121 705 aaPredicted RBP2.46□□□□□ -2.02
AFI1YOR129C TIF5P38431 405 aaKnown RBP2.46□□□□□ -2.02
AFI1YOR129C POP2P39008 433 aa2.46□□□□□ -2.02
AFI1YOR129C MAM1P40065 302 aa2.46□□□□□ -2.02
AFI1YOR129C FTR1P40088 404 aa2.46□□□□□ -2.02
AFI1YOR129C SMK1P41808 388 aa2.46□□□□□ -2.02
AFI1YOR129C BUD27P43573 796 aaKnown RBP RIP-Chip data2.46□□□□□ -2.02not detected
AFI1YOR129C SHE10P53075 577 aa2.46□□□□□ -2.02
AFI1YOR129C VID30P53076 958 aa2.46□□□□□ -2.02
AFI1YOR129C RRT6P53117 311 aaPredicted RBP2.46□□□□□ -2.02
AFI1YOR129C RAD33Q04231 177 aa2.46□□□□□ -2.02
AFI1YOR129C POM34Q12445 299 aa2.46□□□□□ -2.02
AFI1YOR129C PHO5P00635 467 aa2.45□□□□□ -2.02
AFI1YOR129C MTF2P10849 440 aa2.45□□□□□ -2.02
AFI1YOR129C HMG2P12684 1045 aa2.45□□□□□ -2.02
AFI1YOR129C MER1P16523 270 aa2.45□□□□□ -2.02
AFI1YOR129C RPB4P20433 221 aaPredicted RBP2.45□□□□□ -2.02
AFI1YOR129C YCL049CP25577 312 aa2.45□□□□□ -2.02
AFI1YOR129C CHS3P29465 1165 aa2.45□□□□□ -2.02
AFI1YOR129C SMY1P32364 656 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C VMA8P32610 256 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C FRD1P32614 470 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C CBF5P33322 483 aaKnown RBP RIP-Chip data2.45□□□□□ -2.02not detected
AFI1YOR129C LST4P34239 828 aa2.45□□□□□ -2.02
AFI1YOR129C APT2P36973 181 aa2.45□□□□□ -2.02
AFI1YOR129C NOP4P37838 685 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C TAF5P38129 798 aa2.45□□□□□ -2.02
AFI1YOR129C YBR138CP38277 524 aa2.45□□□□□ -2.02
AFI1YOR129C IFA38P38286 347 aa2.45□□□□□ -2.02
AFI1YOR129C EHT1P38295 451 aa2.45□□□□□ -2.02
AFI1YOR129C MRPL13Q02204 264 aa2.45□□□□□ -2.02
AFI1YOR129C NRG1Q03125 231 aa2.45□□□□□ -2.02
AFI1YOR129C RNH1Q04740 348 aa2.45□□□□□ -2.02
AFI1YOR129C SWA2Q06677 668 aa2.45□□□□□ -2.02
AFI1YOR129C IWR1Q07532 353 aaPredicted RBP2.45□□□□□ -2.02
AFI1YOR129C TUF1P02992 437 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C RPS13P05756 151 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C ADE3P07245 946 aaKnown RBP2.45□□□□□ -2.02
AFI1YOR129C NUC1P08466 329 aa2.45□□□□□ -2.02
AFI1YOR129C SIR1P21691 654 aa2.45□□□□□ -2.02
AFI1YOR129C CLB4P24871 460 aa2.45□□□□□ -2.02
AFI1YOR129C RER1P25560 188 aa2.45□□□□□ -2.02
AFI1YOR129C LIP5P32875 414 aa2.45□□□□□ -2.02
AFI1YOR129C TSA1P34760 196 aaKnown RBP2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 72.7 ms