RNA–Protein interactions for RNA: YNL224C

SQS1, Transcript of Protein that stimulates the ATPase and helicase activities of Prp43p, yeastyeast

Gene SQS1, Length 2,304 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SQS1YNL224C ADP1P25371 1049 aa3.41□□□□□ -1.86
SQS1YNL224C APL1P27351 700 aa3.41□□□□□ -1.86
SQS1YNL224C PTP2P29461 750 aa3.41□□□□□ -1.86
SQS1YNL224C SMI1P32566 505 aa3.41□□□□□ -1.86
SQS1YNL224C MDJ1P35191 511 aa3.41□□□□□ -1.86
SQS1YNL224C LRG1P35688 1017 aa3.41□□□□□ -1.86
SQS1YNL224C ECM2P38241 364 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C POP7P38291 140 aa3.41□□□□□ -1.86
SQS1YNL224C BDH2P39713 417 aa3.41□□□□□ -1.86
SQS1YNL224C PCL6P40038 420 aa3.41□□□□□ -1.86
SQS1YNL224C THO1P40040 218 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C MRX1P40050 688 aa3.41□□□□□ -1.86
SQS1YNL224C YRB2P40517 327 aa3.41□□□□□ -1.86
SQS1YNL224C THI12P42883 340 aa3.41□□□□□ -1.86
SQS1YNL224C BRE2P43132 505 aa3.41□□□□□ -1.86
SQS1YNL224C THI5P43534 340 aa3.41□□□□□ -1.86
SQS1YNL224C THI11P47183 340 aa3.41□□□□□ -1.86
SQS1YNL224C GNP1P48813 663 aa3.41□□□□□ -1.86
SQS1YNL224C TWF1P53250 332 aa3.41□□□□□ -1.86
SQS1YNL224C EGD1Q02642 157 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C RVB1Q03940 463 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C PDS5Q04264 1277 aa3.41□□□□□ -1.86
SQS1YNL224C GIM5Q04493 163 aa3.41□□□□□ -1.86
SQS1YNL224C GRS2Q06817 618 aa3.41□□□□□ -1.86
SQS1YNL224C SYO1Q07395 620 aa3.41□□□□□ -1.86
SQS1YNL224C THI13Q07748 340 aa3.41□□□□□ -1.86
SQS1YNL224C SDO1Q07953 250 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C ESA1Q08649 445 aa3.41□□□□□ -1.86
SQS1YNL224C DAS2Q12084 232 aa3.41□□□□□ -1.86
SQS1YNL224C MSH5Q12175 901 aa3.41□□□□□ -1.86
SQS1YNL224C TAH18Q12181 623 aa3.41□□□□□ -1.86
SQS1YNL224C TOP2P06786 1428 aaKnown RBP3.41□□□□□ -1.86
SQS1YNL224C CDC36P06100 191 aaPredicted RBP3.4□□□□□ -1.87
SQS1YNL224C SRD1P09007 221 aa3.4□□□□□ -1.87
SQS1YNL224C TCP1P12612 559 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C TRK1P12685 1235 aa3.4□□□□□ -1.87
SQS1YNL224C CDC42P19073 191 aa3.4□□□□□ -1.87
SQS1YNL224C PRD1P25375 712 aa3.4□□□□□ -1.87
SQS1YNL224C RPC19P28000 142 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C ERG3P32353 365 aa3.4□□□□□ -1.87
SQS1YNL224C AFG2P32794 780 aa3.4□□□□□ -1.87
SQS1YNL224C GYP6P32806 458 aa3.4□□□□□ -1.87
SQS1YNL224C RAD54P32863 898 aa3.4□□□□□ -1.87
SQS1YNL224C SPT10P35208 640 aa3.4□□□□□ -1.87
SQS1YNL224C LAS1P36146 502 aaPredicted RBP3.4□□□□□ -1.87
SQS1YNL224C RCR1P38212 213 aa3.4□□□□□ -1.87
SQS1YNL224C KEL1P38853 1164 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C RCY1P39531 840 aa3.4□□□□□ -1.87
SQS1YNL224C BOL3P39724 118 aa3.4□□□□□ -1.87
SQS1YNL224C RSP5P39940 809 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C SIP5P40210 489 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C RPL34BP40525 121 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C STR2P47164 639 aa3.4□□□□□ -1.87
SQS1YNL224C MAL11P53048 616 aa3.4□□□□□ -1.87
SQS1YNL224C RAI1P53063 387 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C NUT1P53114 1132 aa3.4□□□□□ -1.87
SQS1YNL224C SNF12P53628 566 aa3.4□□□□□ -1.87
SQS1YNL224C ARE2P53629 642 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C SLT2Q00772 484 aa3.4□□□□□ -1.87
SQS1YNL224C VPS64Q03944 604 aa3.4□□□□□ -1.87
SQS1YNL224C YML082WQ04533 649 aaKnown RBP3.4□□□□□ -1.87
SQS1YNL224C YPD1Q07688 167 aa3.4□□□□□ -1.87
SQS1YNL224C RBD2Q12270 262 aa3.4□□□□□ -1.87
SQS1YNL224C PNS1Q12412 539 aa3.4□□□□□ -1.87
SQS1YNL224C YOS9Q99220 542 aa3.4□□□□□ -1.87
SQS1YNL224C EDE1P34216 1381 aa3.4□□□□□ -1.87
SQS1YNL224C PHO5P00635 467 aa3.39□□□□□ -1.87
SQS1YNL224C PDX1P16451 410 aa3.39□□□□□ -1.87
SQS1YNL224C FUR1P18562 216 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C SEC62P21825 274 aa3.39□□□□□ -1.87
SQS1YNL224C BAS1P22035 811 aa3.39□□□□□ -1.87
SQS1YNL224C RAD53P22216 821 aa3.39□□□□□ -1.87
SQS1YNL224C MNE1P24720 663 aa3.39□□□□□ -1.87
SQS1YNL224C CWH43P25618 953 aa3.39□□□□□ -1.87
SQS1YNL224C MSP1P28737 362 aa3.39□□□□□ -1.87
SQS1YNL224C PTC4P38089 393 aa3.39□□□□□ -1.87
SQS1YNL224C FZO1P38297 855 aa3.39□□□□□ -1.87
SQS1YNL224C TDP1P38319 544 aa3.39□□□□□ -1.87
SQS1YNL224C MGE1P38523 228 aa3.39□□□□□ -1.87
SQS1YNL224C RPN10P38886 268 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C YJL068CP40363 299 aa3.39□□□□□ -1.87
SQS1YNL224C ARF3P40994 183 aaRIP-Chip data3.39□□□□□ -1.87not detected
SQS1YNL224C BUB1P41695 1021 aaKnown RBP RIP-Chip data3.39□□□□□ -1.87not detected
SQS1YNL224C MNN11P46985 422 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C RBG2P53295 368 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C COQ6P53318 479 aa3.39□□□□□ -1.87
SQS1YNL224C MRPL19P53875 158 aa3.39□□□□□ -1.87
SQS1YNL224C RSN1Q03516 953 aa3.39□□□□□ -1.87
SQS1YNL224C YMR010WQ03687 405 aa3.39□□□□□ -1.87
SQS1YNL224C PML1Q07930 204 aaPredicted RBP3.39□□□□□ -1.87
SQS1YNL224C SMC5Q08204 1093 aa3.39□□□□□ -1.87
SQS1YNL224C VPS54Q12071 889 aa3.39□□□□□ -1.87
SQS1YNL224C SPE3Q12074 293 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C MDY2Q12285 212 aa3.39□□□□□ -1.87
SQS1YNL224C PAR32Q12515 295 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C MDM12Q92328 271 aa3.39□□□□□ -1.87
SQS1YNL224C LAM4P38800 1345 aa3.39□□□□□ -1.87
SQS1YNL224C TY1B-DR4Q07793 1604 aa3.39□□□□□ -1.87
SQS1YNL224C RPP2BP02400 110 aaKnown RBP3.39□□□□□ -1.87
SQS1YNL224C SNF1P06782 633 aaKnown RBP3.39□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 28.6 ms