RNA–Protein interactions for RNA: YNL016W

PUB1, Transcript of Poly (A)+ RNA-binding protein, yeastyeast

Gene PUB1, Length 1,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUB1YNL016W YNR065CP53751 1116 aa4.26□□□□□ -1.73
PUB1YNL016W EAR1Q03212 550 aa4.26□□□□□ -1.73
PUB1YNL016W YDR341CQ05506 607 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W YLR257WQ06146 321 aaKnown RBP4.26□□□□□ -1.73
PUB1YNL016W YCG1Q06680 1035 aa4.26□□□□□ -1.73
PUB1YNL016W ACK1Q07622 623 aaPredicted RBP4.26□□□□□ -1.73
PUB1YNL016W SOG2Q08817 791 aa4.26□□□□□ -1.73
PUB1YNL016W YIG1Q08956 461 aa4.26□□□□□ -1.73
PUB1YNL016W SFI1Q12369 946 aa4.26□□□□□ -1.73
PUB1YNL016W PTC5Q12511 572 aa4.26□□□□□ -1.73
PUB1YNL016W RPL11BQ3E757 174 aaPredicted RBP4.26□□□□□ -1.73
PUB1YNL016W OLE1P21147 510 aaKnown RBP4.25□□□□□ -1.73
PUB1YNL016W ERG3P32353 365 aa4.25□□□□□ -1.73
PUB1YNL016W SDS22P36047 338 aa4.25□□□□□ -1.73
PUB1YNL016W YKL151CP36059 337 aa4.25□□□□□ -1.73
PUB1YNL016W YKR078WP36158 585 aaKnown RBP4.25□□□□□ -1.73
PUB1YNL016W YBR225WP38321 900 aa4.25□□□□□ -1.73
PUB1YNL016W TSL1P38427 1098 aaKnown RBP4.25□□□□□ -1.73
PUB1YNL016W ERG7P38604 731 aa4.25□□□□□ -1.73
PUB1YNL016W YER010CP40011 234 aa4.25□□□□□ -1.73
PUB1YNL016W IMA5P40884 581 aa4.25□□□□□ -1.73
PUB1YNL016W SAE2P46946 345 aa4.25□□□□□ -1.73
PUB1YNL016W MAD3P47074 515 aa4.25□□□□□ -1.73
PUB1YNL016W NIT3P49954 291 aa4.25□□□□□ -1.73
PUB1YNL016W CTF18P49956 741 aa4.25□□□□□ -1.73
PUB1YNL016W UBC9P50623 157 aaPredicted RBP4.25□□□□□ -1.73
PUB1YNL016W CPR6P53691 371 aaKnown RBP4.25□□□□□ -1.73
PUB1YNL016W VPS9P54787 451 aa4.25□□□□□ -1.73
PUB1YNL016W SSL2Q00578 843 aa4.25□□□□□ -1.73
PUB1YNL016W YDR131CQ03899 556 aa4.25□□□□□ -1.73
PUB1YNL016W MFB1Q04922 465 aa4.25□□□□□ -1.73
PUB1YNL016W HRQ1Q05549 1077 aa4.25□□□□□ -1.73
PUB1YNL016W MDM38Q08179 573 aa4.25□□□□□ -1.73
PUB1YNL016W YPL260WQ08977 551 aa4.25□□□□□ -1.73
PUB1YNL016W FUM1P08417 488 aaKnown RBP4.24□□□□□ -1.73
PUB1YNL016W PMS1P14242 873 aa4.24□□□□□ -1.73
PUB1YNL016W CKA1P15790 372 aa4.24□□□□□ -1.73
PUB1YNL016W SGF29P25554 259 aa4.24□□□□□ -1.73
PUB1YNL016W SEC65P29478 273 aa4.24□□□□□ -1.73
PUB1YNL016W CYS3P31373 394 aaKnown RBP4.24□□□□□ -1.73
PUB1YNL016W DBF4P32325 704 aa4.24□□□□□ -1.73
PUB1YNL016W ORC2P32833 620 aa4.24□□□□□ -1.73
PUB1YNL016W SLA2P33338 968 aa4.24□□□□□ -1.73
PUB1YNL016W MTH1P35198 433 aa4.24□□□□□ -1.73
PUB1YNL016W KEL1P38853 1164 aaKnown RBP4.24□□□□□ -1.73
PUB1YNL016W YHR202WP38887 602 aa4.24□□□□□ -1.73
PUB1YNL016W PUG1P40100 303 aa4.24□□□□□ -1.73
PUB1YNL016W GYP7P48365 746 aa4.24□□□□□ -1.73
PUB1YNL016W YKE2P52553 114 aa4.24□□□□□ -1.73
PUB1YNL016W GUP1P53154 560 aa4.24□□□□□ -1.73
PUB1YNL016W ARE2P53629 642 aaKnown RBP4.24□□□□□ -1.73
PUB1YNL016W TIM11P81449 96 aaPredicted RBP4.24□□□□□ -1.73
PUB1YNL016W YPL071CQ02864 156 aa4.24□□□□□ -1.73
PUB1YNL016W TRM8Q12009 286 aa4.24□□□□□ -1.73
PUB1YNL016W SMF3Q12078 473 aaPredicted RBP4.24□□□□□ -1.73
PUB1YNL016W DCS2Q12123 353 aa4.24□□□□□ -1.73
PUB1YNL016W PSF3Q12146 194 aa4.24□□□□□ -1.73
PUB1YNL016W QCR6P00127 147 aa4.23□□□□□ -1.73
PUB1YNL016W SES1P07284 462 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W SWI6P09959 803 aa4.23□□□□□ -1.73
PUB1YNL016W ADH4P10127 382 aa4.23□□□□□ -1.73
PUB1YNL016W VMA2P16140 517 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W ADP1P25371 1049 aa4.23□□□□□ -1.73
PUB1YNL016W PRD1P25375 712 aa4.23□□□□□ -1.73
PUB1YNL016W KIP1P28742 1111 aa4.23□□□□□ -1.73
PUB1YNL016W NAM7P30771 971 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W LIP5P32875 414 aa4.23□□□□□ -1.73
PUB1YNL016W TGL1P34163 548 aa4.23□□□□□ -1.73
PUB1YNL016W YKR073CP36153 106 aa4.23□□□□□ -1.73
PUB1YNL016W NUP133P36161 1157 aa4.23□□□□□ -1.73
PUB1YNL016W UTP9P38882 575 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W EAF5P39995 279 aa4.23□□□□□ -1.73
PUB1YNL016W RTR1P40084 226 aaPredicted RBP4.23□□□□□ -1.73
PUB1YNL016W SEC27P41811 889 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W IRC5P43610 853 aa4.23□□□□□ -1.73
PUB1YNL016W SPO74P45819 413 aa4.23□□□□□ -1.73
PUB1YNL016W ALY2P47029 1046 aa4.23□□□□□ -1.73
PUB1YNL016W OCA1P50946 238 aaPredicted RBP4.23□□□□□ -1.73
PUB1YNL016W SAP4P53036 818 aa4.23□□□□□ -1.73
PUB1YNL016W BUD9P53226 547 aa4.23□□□□□ -1.73
PUB1YNL016W CBK1P53894 756 aa4.23□□□□□ -1.73
PUB1YNL016W ECM30Q06673 1274 aa4.23□□□□□ -1.73
PUB1YNL016W CEX1Q12453 761 aa4.23□□□□□ -1.73
PUB1YNL016W NOP58Q12499 511 aaKnown RBP4.23□□□□□ -1.73
PUB1YNL016W NUC1P08466 329 aa4.22□□□□□ -1.73
PUB1YNL016W PRO1P32264 428 aa4.22□□□□□ -1.73
PUB1YNL016W MDL2P33311 773 aa4.22□□□□□ -1.73
PUB1YNL016W STE13P33894 931 aa4.22□□□□□ -1.73
PUB1YNL016W WHI3P34761 661 aaKnown RBP4.22□□□□□ -1.73
PUB1YNL016W SRP68P38687 599 aaKnown RBP4.22□□□□□ -1.73
PUB1YNL016W YLF2P38746 405 aa4.22□□□□□ -1.73
PUB1YNL016W SWD1P39706 426 aa4.22□□□□□ -1.73
PUB1YNL016W STL1P39932 569 aa4.22□□□□□ -1.73
PUB1YNL016W UBP5P39944 805 aa4.22□□□□□ -1.73
PUB1YNL016W SCS2P40075 244 aaKnown RBP4.22□□□□□ -1.73
PUB1YNL016W YJL068CP40363 299 aa4.22□□□□□ -1.73
PUB1YNL016W CIR1P42940 261 aa4.22□□□□□ -1.73
PUB1YNL016W NET1P47035 1189 aa4.22□□□□□ -1.73
PUB1YNL016W NNF2P53253 936 aa4.22□□□□□ -1.73
PUB1YNL016W MTD1Q02046 320 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms