RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	RRP1	P35178	278 aa	Predicted RBP	7	□□□□□ -1.29
MSC3	YLR219W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	7	□□□□□ -1.29	not detected
MSC3	YLR219W	MSG5	P38590	489 aa		7	□□□□□ -1.29
MSC3	YLR219W	SAK1	P38990	1142 aa		7	□□□□□ -1.29
MSC3	YLR219W	YMR134W	P40207	237 aa		7	□□□□□ -1.29
MSC3	YLR219W	YVH1	Q02256	364 aa	Known RBP	7	□□□□□ -1.29
MSC3	YLR219W	FMP25	Q08023	583 aa		7	□□□□□ -1.29
MSC3	YLR219W	NDJ1	Q12366	352 aa		7	□□□□□ -1.29
MSC3	YLR219W	CCP1	P00431	361 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	GPI10	P30777	616 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	RAD16	P31244	790 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	HSP78	P33416	811 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	SAF1	P38352	637 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	SAW1	P39735	261 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	YNL320W	P42840	284 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	YNL247W	P53852	767 aa	Known RBP	6.99	□□□□□ -1.29
MSC3	YLR219W	NOP6	Q07623	225 aa	Known RBP	6.99	□□□□□ -1.29
MSC3	YLR219W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	6.99	□□□□□ -1.29	RIP-Chip
MSC3	YLR219W	ARP7	Q12406	477 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	IZH4	Q99393	312 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	SLY1	P22213	666 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	SYN8	P31377	255 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	TIF5	P38431	405 aa	Known RBP	6.99	□□□□□ -1.29
MSC3	YLR219W	SLX8	P40072	274 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	ATG36	P46983	293 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	BFA1	P47113	574 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	PEX31	P53203	462 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	UTP8	P53276	713 aa	Known RBP	6.99	□□□□□ -1.29
MSC3	YLR219W	PIG1	Q06216	648 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	YPQ1	Q12010	308 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	NUR1	Q12066	484 aa		6.99	□□□□□ -1.29
MSC3	YLR219W	YIH1	P25637	258 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	SFB3	P38810	929 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	RRT5	P43607	289 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	UTP6	Q02354	440 aa	Known RBP	6.98	□□□□□ -1.29
MSC3	YLR219W	ARA2	Q04212	335 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	BSP1	Q06604	576 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	ACM1	Q08981	209 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	ISF1	P32488	338 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	AIM26	P32858	118 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	ECM2	P38241	364 aa	Known RBP	6.98	□□□□□ -1.29
MSC3	YLR219W	RSM26	P47141	266 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	SND1	Q04007	877 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	PMT7	Q06644	662 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	AAD4	Q07747	329 aa		6.98	□□□□□ -1.29
MSC3	YLR219W	APL5	Q08951	932 aa	Known RBP	6.98	□□□□□ -1.29
MSC3	YLR219W	MET16	P18408	261 aa	Predicted RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	VHC1	P38329	1120 aa		6.97	□□□□□ -1.29
MSC3	YLR219W	FSH1	P38777	243 aa	Known RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	PRM9	P39551	298 aa		6.97	□□□□□ -1.29
MSC3	YLR219W	BTT1	P40314	149 aa	Predicted RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	MIC19	P43594	170 aa		6.97	□□□□□ -1.29
MSC3	YLR219W	PIR3	Q03180	325 aa		6.97	□□□□□ -1.29
MSC3	YLR219W	FAP7	Q12055	197 aa	Predicted RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	SPE3	Q12074	293 aa	Known RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	LPX1	Q12405	387 aa	Known RBP	6.97	□□□□□ -1.29
MSC3	YLR219W	CDC8	P00572	216 aa		6.96	□□□□□ -1.29
MSC3	YLR219W	PTC3	P34221	468 aa	Known RBP	6.96	□□□□□ -1.29
MSC3	YLR219W	LAS1	P36146	502 aa	Predicted RBP	6.96	□□□□□ -1.29
MSC3	YLR219W	NUP60	P39705	539 aa		6.96	□□□□□ -1.29
MSC3	YLR219W	NMA111	P53920	997 aa		6.96	□□□□□ -1.29
MSC3	YLR219W	TPO1	Q07824	586 aa		6.96	□□□□□ -1.29
MSC3	YLR219W	RIO1	Q12196	484 aa	Known RBP	6.96	□□□□□ -1.29
MSC3	YLR219W	HMG2	P12684	1045 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	UBC6	P33296	250 aa	Predicted RBP	6.96	□□□□□ -1.3
MSC3	YLR219W	ECM13	P38195	257 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	PEX28	P38848	579 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	LAM1	P38851	1228 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	AIM18	P38884	321 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	RFX1	P48743	811 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	PSP1	P50896	841 aa	Known RBP	6.96	□□□□□ -1.3
MSC3	YLR219W	YOR387C	Q08910	206 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	YPR117W	Q06116	2489 aa		6.96	□□□□□ -1.3
MSC3	YLR219W	YML002W	P0CF17	737 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	CDC24	P11433	854 aa	Predicted RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	APE1	P14904	514 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	CBF1	P17106	351 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	OLA1	P38219	394 aa	Known RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	EDC3	P39998	551 aa	Known RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	SNG1	P46950	547 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	HLJ1	P48353	224 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	YGR127W	P53275	312 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	SVS1	Q12254	260 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	GPM3	Q12326	303 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	ENO2	P00925	437 aa	Known RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	PEP5	P12868	1029 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	MTF1	P14908	341 aa	Known RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	PPH22	P23595	377 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	PEX34	P25584	144 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	PLC1	P32383	869 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	DUG2	P38149	878 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	POP4	P38336	279 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	BIT2	P38346	545 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	URA8	P38627	578 aa	Predicted RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	STL1	P39932	569 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	RGD2	P43556	714 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	CNN1	P43618	361 aa		6.95	□□□□□ -1.3
MSC3	YLR219W	TRM112	P53738	135 aa	Predicted RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	RPL22B	P56628	122 aa	Known RBP	6.95	□□□□□ -1.3
MSC3	YLR219W	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	6.95	□□□□□ -1.3	not detected

Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms