RNA–Protein interactions for RNA: YLL035W

GRC3, Transcript of Polynucleotide kinase present on rDNA, yeast

Gene GRC3, Length 1,899 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GRC3	YLL035W	IPP1	P00817	287 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	RPL6B	P05739	176 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	RPL22A	P05749	121 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	DSF1	P0CX08	502 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	YNR073C	P0CX09	502 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	HAP4	P14064	554 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	HSP60	P19882	572 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	DBP3	P20447	523 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	DBF2	P22204	572 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	SWI4	P25302	1093 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	ILV6	P25605	309 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	PEP3	P27801	918 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	MLS1	P30952	554 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	HIR1	P32479	840 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	NTH2	P35172	780 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	GLG1	P36143	616 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	YKR078W	P36158	585 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	SHM1	P37292	490 aa	Predicted RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	YHR112C	P38716	378 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	MTG2	P38860	518 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	OAF1	P39720	1047 aa	Predicted RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	SMX2	P40204	77 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	JLP2	P40206	208 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	PCI8	P40512	444 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	PSP2	P50109	593 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	LGE1	Q02796	332 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	HER2	Q03557	464 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	SHE9	Q04172	456 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	UTP5	Q04177	643 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	PHM6	Q05637	104 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	YCS4	Q06156	1176 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	NEW1	Q08972	1196 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	BAG7	Q12128	409 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	TMA17	Q12513	150 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	ATP4	P05626	244 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	MSD1	P15179	658 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	HNM1	P19807	563 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	THI4	P32318	326 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	AFR1	P33304	620 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	UBP11	P36026	717 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	SET3	P36124	751 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	RCK2	P38623	610 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	HSE1	P38753	452 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	RCY1	P39531	840 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
GRC3	YLL035W	BNA3	P47039	444 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	TRF5	P48561	642 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	ZRG17	P53735	605 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	YNR063W	P53749	607 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	CWC24	P53769	259 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	CNM67	P53865	581 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	NOG1	Q02892	647 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	GCN5	Q03330	439 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	ATG38	Q05789	226 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	MLC2	Q06580	163 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	GIC2	Q06648	383 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	DTD1	Q07648	150 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	GRC3	Q07845	632 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	DIS3	Q08162	1001 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	GAS4	Q08271	471 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	VHS3	Q08438	674 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	SGT1	Q08446	395 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	NYV1	Q12255	253 aa		4.56	□□□□□ -1.68
GRC3	YLL035W	SNU23	Q12368	194 aa	Predicted RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	DBP10	Q12389	995 aa	Known RBP	4.56	□□□□□ -1.68
GRC3	YLL035W	ADR1	P07248	1323 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	URB1	P34241	1764 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	CIT1	P00890	479 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	INH1	P01097	85 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	SIR3	P06701	978 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	ALG1	P16661	449 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	SPO12	P17123	173 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	SRV2	P17555	526 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	PRP19	P32523	503 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	PFF1	P38244	976 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	TIF5	P38431	405 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	RSC30	P38781	883 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	DDI1	P40087	428 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	SBE2	P42223	864 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	YJR120W	P47157	116 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	PSP1	P50896	841 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	ZIP2	P53061	704 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	SND1	Q04007	877 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	URH1	Q04179	340 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	DBP9	Q06218	594 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	VIP1	Q06685	1146 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	YDL124W	Q07551	312 aa	Known RBP	4.55	□□□□□ -1.68
GRC3	YLL035W	VPS54	Q12071	889 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	BUD3	P25558	1636 aa		4.55	□□□□□ -1.68
GRC3	YLL035W	LEU2	P04173	364 aa	Predicted RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	FUR4	P05316	633 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	PHO4	P07270	312 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RPS6A	P0CX37	236 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	RPS6B	P0CX38	236 aa	Predicted RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	PGI1	P12709	554 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	SPO11	P23179	398 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	POL4	P25615	582 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	NAM7	P30771	971 aa	Known RBP	4.54	□□□□□ -1.68
GRC3	YLL035W	ZIP1	P31111	875 aa		4.54	□□□□□ -1.68
GRC3	YLL035W	NUD1	P32336	851 aa		4.54	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 19.6 ms