RNA–Protein interactions for RNA: YKL172W

EBP2, Transcript of Required for 25S rRNA maturation and 60S ribosomal subunit assembly, yeast

Gene EBP2, Length 1,284 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EBP2	YKL172W	YIL166C	P40445	542 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	PUS4	P48567	403 aa	Known RBP	5.13	□□□□□ -1.59
EBP2	YKL172W	EFR3	Q03653	782 aa	Known RBP	5.13	□□□□□ -1.59
EBP2	YKL172W	TRI1	Q05024	226 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	NUR1	Q12066	484 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	MPD2	Q99316	277 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	LAM4	P38800	1345 aa		5.13	□□□□□ -1.59
EBP2	YKL172W	SST2	P11972	698 aa	Known RBP	5.12	□□□□□ -1.59
EBP2	YKL172W	TGL1	P34163	548 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	MUP3	P38734	546 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	MFM1	Q02783	413 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	YDR179W-A	Q03983	463 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	ARR3	Q06598	404 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	YPL216W	Q08964	1102 aa		5.12	□□□□□ -1.59
EBP2	YKL172W	MDM20	Q12387	796 aa	Known RBP	5.12	□□□□□ -1.59
EBP2	YKL172W	LOT5	P34234	306 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	YLF2	P38746	405 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	PIH1	P38768	344 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	MAD2	P40958	196 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	ASK10	P48361	1146 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	YNR071C	P53757	342 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	YOL057W	Q08225	711 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	TGS1	Q12052	315 aa		5.11	□□□□□ -1.59
EBP2	YKL172W	RTK1	Q12100	620 aa	Predicted RBP	5.11	□□□□□ -1.59
EBP2	YKL172W	VAS1	P07806	1104 aa	Known RBP	5.1	□□□□□ -1.59
EBP2	YKL172W	APM1	Q00776	475 aa	Predicted RBP	5.1	□□□□□ -1.59
EBP2	YKL172W	MET14	Q02196	202 aa		5.1	□□□□□ -1.59
EBP2	YKL172W	MLC2	Q06580	163 aa		5.1	□□□□□ -1.59
EBP2	YKL172W	YDL073W	Q07454	984 aa		5.1	□□□□□ -1.59
EBP2	YKL172W	NYV1	Q12255	253 aa		5.1	□□□□□ -1.59
EBP2	YKL172W	ARP7	Q12406	477 aa		5.1	□□□□□ -1.59
EBP2	YKL172W	STE4	P18851	423 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	ARG1	P22768	420 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	SPO11	P23179	398 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	YMC2	P38087	329 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	MRK1	P50873	501 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	YIP4	P53093	235 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	DIN7	Q12086	430 aa		5.09	□□□□□ -1.59
EBP2	YKL172W	URA3	P03962	267 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	PCK1	P10963	549 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	CBP3	P21560	335 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	ILV6	P25605	309 aa	Known RBP	5.08	□□□□□ -1.6
EBP2	YKL172W	PTP2	P29461	750 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	DSS4	P32601	143 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	RIM4	P38741	713 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	YEL020C	P39994	560 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	SCS2	P40075	244 aa	Known RBP	5.08	□□□□□ -1.6
EBP2	YKL172W	GSM1	P42950	618 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	ATG36	P46983	293 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	PAP2	P53632	584 aa	Known RBP	5.08	□□□□□ -1.6
EBP2	YKL172W	TRS23	Q03784	219 aa		5.08	□□□□□ -1.6
EBP2	YKL172W	DBP10	Q12389	995 aa	Known RBP	5.08	□□□□□ -1.6
EBP2	YKL172W	PHO5	P00635	467 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	TPK2	P06245	380 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	YEF3	P16521	1044 aa	Known RBP	5.07	□□□□□ -1.6
EBP2	YKL172W	VPS34	P22543	875 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	CNE1	P27825	502 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	CCL1	P37366	393 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	YJR008W	P47085	338 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	PIP2	P52960	996 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	BUD17	P53727	317 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	USA1	Q03714	838 aa		5.07	□□□□□ -1.6
EBP2	YKL172W	GAL1	P04385	528 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	BET2	P20133	325 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	PRP45	P28004	379 aa	Predicted RBP	5.06	□□□□□ -1.6
EBP2	YKL172W	SWD1	P39706	426 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	MIT1	P40002	666 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	RPS15	Q01855	142 aa	Known RBP	5.06	□□□□□ -1.6
EBP2	YKL172W	GFD1	Q04839	188 aa	Known RBP	5.06	□□□□□ -1.6
EBP2	YKL172W	CRD1	Q07560	283 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	RRP6	Q12149	733 aa	Known RBP	5.06	□□□□□ -1.6
EBP2	YKL172W	YOL114C	Q12322	202 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	ZPS1	Q12512	249 aa		5.06	□□□□□ -1.6
EBP2	YKL172W	ADH4	P10127	382 aa		5.05	□□□□□ -1.6
EBP2	YKL172W	ADY2	P25613	283 aa		5.05	□□□□□ -1.6
EBP2	YKL172W	EMP70	P32802	667 aa		5.05	□□□□□ -1.6
EBP2	YKL172W	RRP8	P38961	392 aa	Known RBP	5.05	□□□□□ -1.6
EBP2	YKL172W	CPR8	P53728	308 aa		5.05	□□□□□ -1.6
EBP2	YKL172W	CEG1	Q01159	459 aa	Predicted RBP	5.05	□□□□□ -1.6
EBP2	YKL172W	STE12	P13574	688 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	RPA135	P22138	1203 aa	Known RBP	5.04	□□□□□ -1.6
EBP2	YKL172W	SAT4	P25333	603 aa	Known RBP	5.04	□□□□□ -1.6
EBP2	YKL172W	UGP1	P32861	499 aa	Known RBP	5.04	□□□□□ -1.6
EBP2	YKL172W	PMC1	P38929	1173 aa	Predicted RBP	5.04	□□□□□ -1.6
EBP2	YKL172W	PAC2	P39937	518 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	VFA1	P40080	203 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	ASN1	P49089	572 aa	Known RBP	5.04	□□□□□ -1.6
EBP2	YKL172W	COQ6	P53318	479 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	TEP1	P53916	434 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	HOF1	Q05080	669 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	SUT2	Q12286	268 aa		5.04	□□□□□ -1.6
EBP2	YKL172W	CTT1	P06115	562 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	WHI2	P12611	486 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	PPZ2	P33329	710 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	TPM2	P40414	161 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	HIS6	P40545	261 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	IMA5	P40884	581 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	QRI7	P43122	407 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	IDS2	P46958	469 aa		5.03	□□□□□ -1.6
EBP2	YKL172W	ENT2	Q05785	613 aa		5.03	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 48 ms