RNA–Protein interactions for RNA: YKL124W

SSH4, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeastyeast

Gene SSH4, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSH4YKL124W YPR078CQ06813 372 aa4.67□□□□□ -1.66
SSH4YKL124W TMA16Q08687 178 aa4.67□□□□□ -1.66
SSH4YKL124W JIP3O13555 125 aa4.66□□□□□ -1.66
SSH4YKL124W CDC33P07260 213 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W FUS1P11710 512 aa4.66□□□□□ -1.66
SSH4YKL124W DAL1P32375 460 aa4.66□□□□□ -1.66
SSH4YKL124W PEX5P35056 612 aa4.66□□□□□ -1.66
SSH4YKL124W ECM13P38195 257 aa4.66□□□□□ -1.66
SSH4YKL124W TIF5P38431 405 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W TFG2P41896 400 aaPredicted RBP4.66□□□□□ -1.66
SSH4YKL124W PHO86P46956 311 aa4.66□□□□□ -1.66
SSH4YKL124W HFM1P51979 1187 aa4.66□□□□□ -1.66
SSH4YKL124W PUS2P53167 370 aa4.66□□□□□ -1.66
SSH4YKL124W MTD1Q02046 320 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W TOF2Q02208 771 aa4.66□□□□□ -1.66
SSH4YKL124W VPS16Q03308 798 aa4.66□□□□□ -1.66
SSH4YKL124W GCN5Q03330 439 aa4.66□□□□□ -1.66
SSH4YKL124W ARO80Q04052 950 aa4.66□□□□□ -1.66
SSH4YKL124W YPR084WQ06821 456 aa4.66□□□□□ -1.66
SSH4YKL124W VPS54Q12071 889 aa4.66□□□□□ -1.66
SSH4YKL124W REV1P12689 985 aa4.66□□□□□ -1.66
SSH4YKL124W SIR1P21691 654 aa4.66□□□□□ -1.66
SSH4YKL124W AEP2P22136 580 aa4.66□□□□□ -1.66
SSH4YKL124W PDC6P26263 563 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W MRP4P32902 394 aa4.66□□□□□ -1.66
SSH4YKL124W MTC2P34246 357 aa4.66□□□□□ -1.66
SSH4YKL124W SAP190P36123 1033 aa4.66□□□□□ -1.66
SSH4YKL124W FMO1P38866 432 aa4.66□□□□□ -1.66
SSH4YKL124W DOT6P40059 670 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W YIL161WP40449 235 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W CHS6P40955 746 aa4.66□□□□□ -1.66
SSH4YKL124W YJL049WP47048 450 aa4.66□□□□□ -1.66
SSH4YKL124W HOP2P53187 214 aa4.66□□□□□ -1.66
SSH4YKL124W IMP4P53941 290 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W YPL014WQ02606 381 aa4.66□□□□□ -1.66
SSH4YKL124W HRD3Q05787 833 aa4.66□□□□□ -1.66
SSH4YKL124W RCL1Q08096 367 aaPredicted RBP4.66□□□□□ -1.66
SSH4YKL124W DIS3Q08162 1001 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W MDM38Q08179 573 aa4.66□□□□□ -1.66
SSH4YKL124W CIR2Q08822 631 aa4.66□□□□□ -1.66
SSH4YKL124W DDC1Q08949 612 aa4.66□□□□□ -1.66
SSH4YKL124W CWC2Q12046 339 aaPredicted RBP4.66□□□□□ -1.66
SSH4YKL124W MEX67Q99257 599 aaKnown RBP4.66□□□□□ -1.66
SSH4YKL124W AMS1P22855 1083 aa4.65□□□□□ -1.67
SSH4YKL124W GPI10P30777 616 aa4.65□□□□□ -1.67
SSH4YKL124W STO1P34160 861 aaKnown RBP4.65□□□□□ -1.67
SSH4YKL124W TRZ1P36159 838 aaPredicted RBP4.65□□□□□ -1.67
SSH4YKL124W TGL4P36165 910 aa4.65□□□□□ -1.67
SSH4YKL124W CRP1P38845 465 aaKnown RBP4.65□□□□□ -1.67
SSH4YKL124W TAT2P38967 592 aa4.65□□□□□ -1.67
SSH4YKL124W VFA1P40080 203 aa4.65□□□□□ -1.67
SSH4YKL124W HXT8P40886 569 aa4.65□□□□□ -1.67
SSH4YKL124W CDC1P40986 491 aa4.65□□□□□ -1.67
SSH4YKL124W PFD1P46988 109 aa4.65□□□□□ -1.67
SSH4YKL124W YNL108CP53929 270 aa4.65□□□□□ -1.67
SSH4YKL124W GPD1Q00055 391 aaKnown RBP4.65□□□□□ -1.67
SSH4YKL124W SEG1Q04279 960 aa4.65□□□□□ -1.67
SSH4YKL124W ERV41Q04651 352 aa4.65□□□□□ -1.67
SSH4YKL124W AIM32Q04689 311 aa4.65□□□□□ -1.67
SSH4YKL124W AVO1Q08236 1176 aa4.65□□□□□ -1.67
SSH4YKL124W LCB4Q12246 624 aa4.65□□□□□ -1.67
SSH4YKL124W CET1O13297 549 aaPredicted RBP4.64□□□□□ -1.67
SSH4YKL124W CCP1P00431 361 aa4.64□□□□□ -1.67
SSH4YKL124W INH1P01097 85 aa4.64□□□□□ -1.67
SSH4YKL124W RPS6AP0CX37 236 aaKnown RBP4.64□□□□□ -1.67
SSH4YKL124W RPS6BP0CX38 236 aaPredicted RBP4.64□□□□□ -1.67
SSH4YKL124W HOM2P13663 365 aaKnown RBP4.64□□□□□ -1.67
SSH4YKL124W KRR1P25586 316 aaPredicted RBP4.64□□□□□ -1.67
SSH4YKL124W AAD3P25612 363 aa4.64□□□□□ -1.67
SSH4YKL124W IME2P32581 645 aa4.64□□□□□ -1.67
SSH4YKL124W NIP100P33420 868 aa4.64□□□□□ -1.67
SSH4YKL124W PEX6P33760 1030 aa4.64□□□□□ -1.67
SSH4YKL124W SEG2P34250 1132 aa4.64□□□□□ -1.67
SSH4YKL124W SHM1P37292 490 aaPredicted RBP4.64□□□□□ -1.67
SSH4YKL124W SPT8P38915 602 aa4.64□□□□□ -1.67
SSH4YKL124W TAF9Q05027 157 aa4.64□□□□□ -1.67
SSH4YKL124W PIN2Q12057 282 aa4.64□□□□□ -1.67
SSH4YKL124W FMP27Q06179 2628 aa4.64□□□□□ -1.67
SSH4YKL124W TOR1P35169 2470 aa4.64□□□□□ -1.67
SSH4YKL124W ENO1P00924 437 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W ENO2P00925 437 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W PUT4P15380 627 aa4.63□□□□□ -1.67
SSH4YKL124W EST1P17214 699 aaPredicted RBP4.63□□□□□ -1.67
SSH4YKL124W XRS2P33301 854 aa4.63□□□□□ -1.67
SSH4YKL124W PXL1P36166 706 aa4.63□□□□□ -1.67
SSH4YKL124W MED6P38782 295 aa4.63□□□□□ -1.67
SSH4YKL124W NDE1P40215 560 aa4.63□□□□□ -1.67
SSH4YKL124W UFE1P41834 346 aa4.63□□□□□ -1.67
SSH4YKL124W YNR061CP53747 219 aa4.63□□□□□ -1.67
SSH4YKL124W RTN1Q04947 295 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W ECM38Q05902 660 aaPredicted RBP4.63□□□□□ -1.67
SSH4YKL124W PMT7Q06644 662 aa4.63□□□□□ -1.67
SSH4YKL124W LPX1Q12405 387 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W NOP14Q99207 810 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W FRT1Q99332 602 aa4.63□□□□□ -1.67
SSH4YKL124W TUP1P16649 713 aa4.63□□□□□ -1.67
SSH4YKL124W PHO13P19881 312 aa4.63□□□□□ -1.67
SSH4YKL124W FPR1P20081 114 aaKnown RBP4.63□□□□□ -1.67
SSH4YKL124W KIN3P22209 435 aa4.63□□□□□ -1.67
SSH4YKL124W PSE1P32337 1089 aaKnown RBP4.63□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms