RNA–Protein interactions for RNA: YJL179W

PFD1, Transcript of Subunit of heterohexameric prefoldin, yeastyeast

Gene PFD1, Length 330 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PFD1YJL179W YNL195CP40168 261 aa2.19□□□□□ -2.06
PFD1YJL179W YIL077CP40508 320 aa2.19□□□□□ -2.06
PFD1YJL179W SET2P46995 733 aaKnown RBP2.19□□□□□ -2.06
PFD1YJL179W YGL260WP53056 76 aa2.19□□□□□ -2.06
PFD1YJL179W COX18P53239 316 aa2.19□□□□□ -2.06
PFD1YJL179W ARP4P80428 489 aa2.19□□□□□ -2.06
PFD1YJL179W BSP1Q06604 576 aa2.19□□□□□ -2.06
PFD1YJL179W CHC1P22137 1653 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W YOR093CQ12275 1648 aa2.18□□□□□ -2.06
PFD1YJL179W URE2P23202 354 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W ATO2P32907 282 aa2.18□□□□□ -2.06
PFD1YJL179W YKR051WP36142 418 aa2.18□□□□□ -2.06
PFD1YJL179W TYS1P36421 394 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W AKL1P38080 1108 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W RPN10P38886 268 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W FLO5P38894 1075 aa2.18□□□□□ -2.06
PFD1YJL179W YMR124WP39523 943 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W CAF16P43569 289 aa2.18□□□□□ -2.06
PFD1YJL179W YGR125WP53273 1036 aa2.18□□□□□ -2.06
PFD1YJL179W SNP1Q00916 300 aaPredicted RBP2.18□□□□□ -2.06
PFD1YJL179W LEE1Q02799 301 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W RPN7Q06103 429 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W GRS2Q06817 618 aa2.18□□□□□ -2.06
PFD1YJL179W WRS1Q12109 432 aaKnown RBP2.18□□□□□ -2.06
PFD1YJL179W ZPS1Q12512 249 aa2.18□□□□□ -2.06
PFD1YJL179W YPT1P01123 206 aaKnown RBP2.17□□□□□ -2.06
PFD1YJL179W CPA2P03965 1118 aaKnown RBP2.17□□□□□ -2.06
PFD1YJL179W AQY1P0CD91 305 aa2.17□□□□□ -2.06
PFD1YJL179W YER190C-BP0CX94 160 aa2.17□□□□□ -2.06
PFD1YJL179W YEL077W-AP0CX95 160 aa2.17□□□□□ -2.06
PFD1YJL179W YGR296C-BP0CX96 160 aa2.17□□□□□ -2.06
PFD1YJL179W YPL283W-BP0CX97 160 aa2.17□□□□□ -2.06
PFD1YJL179W YPR204C-AP0CX98 160 aa2.17□□□□□ -2.06
PFD1YJL179W STO1P34160 861 aaKnown RBP2.17□□□□□ -2.06
PFD1YJL179W COS111P38308 924 aa2.17□□□□□ -2.06
PFD1YJL179W RIM4P38741 713 aa2.17□□□□□ -2.06
PFD1YJL179W PIH1P38768 344 aa2.17□□□□□ -2.06
PFD1YJL179W SNA4Q07549 140 aa2.17□□□□□ -2.06
PFD1YJL179W KIN82P25341 720 aa2.16□□□□□ -2.06
PFD1YJL179W ELF1P36053 145 aa2.16□□□□□ -2.06
PFD1YJL179W RTT107P38850 1070 aa2.16□□□□□ -2.06
PFD1YJL179W BIT61P47041 543 aa2.16□□□□□ -2.06
PFD1YJL179W ZAP1P47043 880 aa2.16□□□□□ -2.06
PFD1YJL179W BRE5P53741 515 aaKnown RBP2.16□□□□□ -2.06
PFD1YJL179W YNL018CP53976 612 aa2.16□□□□□ -2.06
PFD1YJL179W MAK10Q02197 733 aa2.16□□□□□ -2.06
PFD1YJL179W SMA2Q04658 369 aa2.16□□□□□ -2.06
PFD1YJL179W SPN1Q06505 410 aaPredicted RBP2.16□□□□□ -2.06
PFD1YJL179W FLC1Q08967 793 aa2.16□□□□□ -2.06
PFD1YJL179W YLR111WQ12528 110 aa2.16□□□□□ -2.06
PFD1YJL179W PDR11P40550 1411 aa2.16□□□□□ -2.06
PFD1YJL179W NUP188P52593 1655 aaKnown RBP2.15□□□□□ -2.06
PFD1YJL179W DNF3Q12674 1656 aa2.15□□□□□ -2.06
PFD1YJL179W CAN1P04817 590 aa2.15□□□□□ -2.07
PFD1YJL179W THI6P41835 540 aa2.15□□□□□ -2.07
PFD1YJL179W TIM54P47045 478 aa2.15□□□□□ -2.07
PFD1YJL179W YJL049WP47048 450 aa2.15□□□□□ -2.07
PFD1YJL179W COQ6P53318 479 aa2.15□□□□□ -2.07
PFD1YJL179W RTT103Q05543 409 aa2.15□□□□□ -2.07
PFD1YJL179W YDL073WQ07454 984 aa2.15□□□□□ -2.07
PFD1YJL179W PDR5P33302 1511 aaKnown RBP2.15□□□□□ -2.07
PFD1YJL179W VMR1P38735 1592 aa2.15□□□□□ -2.07
PFD1YJL179W WHI2P12611 486 aa2.14□□□□□ -2.07
PFD1YJL179W YCP4P25349 247 aaKnown RBP2.14□□□□□ -2.07
PFD1YJL179W SSZ1P38788 538 aaKnown RBP2.14□□□□□ -2.07
PFD1YJL179W CFD1P40558 293 aa2.14□□□□□ -2.07
PFD1YJL179W YJR039WP47107 1121 aa2.14□□□□□ -2.07
PFD1YJL179W NHX1Q04121 633 aa2.14□□□□□ -2.07
PFD1YJL179W RDL1Q12305 139 aaKnown RBP2.14□□□□□ -2.07
PFD1YJL179W GCN2P15442 1659 aa2.14□□□□□ -2.07
PFD1YJL179W RPS9BP05755 195 aaKnown RBP2.13□□□□□ -2.07
PFD1YJL179W GAL11P19659 1081 aa2.13□□□□□ -2.07
PFD1YJL179W PET127P32606 800 aa2.13□□□□□ -2.07
PFD1YJL179W MRPL7P36519 292 aa2.13□□□□□ -2.07
PFD1YJL179W GDH3P39708 457 aa2.13□□□□□ -2.07
PFD1YJL179W EXO1P39875 702 aa2.13□□□□□ -2.07
PFD1YJL179W YIL024CP40543 189 aa2.13□□□□□ -2.07
PFD1YJL179W OPT1P40897 799 aa2.13□□□□□ -2.07
PFD1YJL179W SKP2P42843 763 aa2.13□□□□□ -2.07
PFD1YJL179W MAL11P53048 616 aa2.13□□□□□ -2.07
PFD1YJL179W TRS23Q03784 219 aa2.13□□□□□ -2.07
PFD1YJL179W NRT1Q08485 598 aa2.13□□□□□ -2.07
PFD1YJL179W IML1P47170 1584 aa2.13□□□□□ -2.07
PFD1YJL179W CIT2P08679 460 aa2.12□□□□□ -2.07
PFD1YJL179W SEC15P22224 910 aa2.12□□□□□ -2.07
PFD1YJL179W CNE1P27825 502 aa2.12□□□□□ -2.07
PFD1YJL179W PAF1P38351 445 aa2.12□□□□□ -2.07
PFD1YJL179W TDA10P42938 290 aa2.12□□□□□ -2.07
PFD1YJL179W YJL043WP47053 257 aa2.12□□□□□ -2.07
PFD1YJL179W LYS20P48570 428 aaKnown RBP2.12□□□□□ -2.07
PFD1YJL179W YIP4P53093 235 aa2.12□□□□□ -2.07
PFD1YJL179W CEF1Q03654 590 aaPredicted RBP2.12□□□□□ -2.07
PFD1YJL179W ISA1Q07821 250 aaPredicted RBP2.12□□□□□ -2.07
PFD1YJL179W HAP1P0CE41 1502 aa2.12□□□□□ -2.07
PFD1YJL179W RAV1P47104 1357 aa2.11□□□□□ -2.07
PFD1YJL179W USO1P25386 1790 aa2.11□□□□□ -2.07
PFD1YJL179W YEL076C-AP0CX16 216 aa2.11□□□□□ -2.07
PFD1YJL179W YLR464WP0CX17 216 aa2.11□□□□□ -2.07
PFD1YJL179W FRS1P15624 595 aaKnown RBP2.11□□□□□ -2.07
PFD1YJL179W SSD1P24276 1250 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
Retrieved 100 of 5,963 RNA–protein pairs in 29.7 ms