RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W CNS1P33313 385 aa3.7□□□□□ -1.82
BCD1YHR040W SPC29P33419 253 aa3.7□□□□□ -1.82
BCD1YHR040W OAF1P39720 1047 aaPredicted RBP3.7□□□□□ -1.82
BCD1YHR040W BUD16P39988 312 aa3.7□□□□□ -1.82
BCD1YHR040W GPP2P40106 250 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W SRB7P47822 140 aa3.7□□□□□ -1.82
BCD1YHR040W YGR153WP48238 217 aa3.7□□□□□ -1.82
BCD1YHR040W INP52P50942 1183 aa3.7□□□□□ -1.82
BCD1YHR040W TAN1P53072 289 aaPredicted RBP3.7□□□□□ -1.82
BCD1YHR040W CNM67P53865 581 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W HDA1P53973 706 aa3.7□□□□□ -1.82
BCD1YHR040W YML131WQ03102 365 aa3.7□□□□□ -1.82
BCD1YHR040W RBA50Q04418 439 aa3.7□□□□□ -1.82
BCD1YHR040W SMD2Q06217 110 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W TSR1Q07381 788 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W RSB1Q08417 382 aa3.7□□□□□ -1.82
BCD1YHR040W TMA16Q08687 178 aa3.7□□□□□ -1.82
BCD1YHR040W NEW1Q08972 1196 aaKnown RBP3.7□□□□□ -1.82
BCD1YHR040W GNT1Q12096 491 aa3.7□□□□□ -1.82
BCD1YHR040W PMA1P05030 918 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W PHR1P05066 565 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
BCD1YHR040W SWI6P09959 803 aa3.69□□□□□ -1.82
BCD1YHR040W YER152CP10356 443 aa3.69□□□□□ -1.82
BCD1YHR040W SAM35P14693 329 aa3.69□□□□□ -1.82
BCD1YHR040W CKI1P20485 582 aa3.69□□□□□ -1.82
BCD1YHR040W GFD2P25370 566 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W CDC60P26637 1090 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W APL1P27351 700 aa3.69□□□□□ -1.82
BCD1YHR040W ICL1P28240 557 aaPredicted RBP3.69□□□□□ -1.82
BCD1YHR040W BLI1P35727 113 aa3.69□□□□□ -1.82
BCD1YHR040W PSY4P38193 441 aa3.69□□□□□ -1.82
BCD1YHR040W YBL028CP38202 106 aa3.69□□□□□ -1.82
BCD1YHR040W PCM1P38628 557 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W YAP1801P38856 637 aa3.69□□□□□ -1.82
BCD1YHR040W CIN4P39110 191 aa3.69□□□□□ -1.82
BCD1YHR040W RPN3P40016 523 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W EMP65P40085 556 aa3.69□□□□□ -1.82
BCD1YHR040W CAF16P43569 289 aa3.69□□□□□ -1.82
BCD1YHR040W MNN11P46985 422 aaKnown RBP3.69□□□□□ -1.82
BCD1YHR040W ASE1P50275 885 aa3.69□□□□□ -1.82
BCD1YHR040W ERG5P54781 538 aa3.69□□□□□ -1.82
BCD1YHR040W ATP25Q03153 612 aa3.69□□□□□ -1.82
BCD1YHR040W SML1Q04964 104 aa3.69□□□□□ -1.82
BCD1YHR040W PHM6Q05637 104 aa3.69□□□□□ -1.82
BCD1YHR040W YPR078CQ06813 372 aa3.69□□□□□ -1.82
BCD1YHR040W GUD1Q07729 489 aa3.69□□□□□ -1.82
BCD1YHR040W ATG9Q12142 997 aa3.69□□□□□ -1.82
BCD1YHR040W MED1Q12321 566 aa3.69□□□□□ -1.82
BCD1YHR040W RMP1Q12530 201 aa3.69□□□□□ -1.82
BCD1YHR040W TY1B-AO13527 1196 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W INH1P01097 85 aa3.68□□□□□ -1.82
BCD1YHR040W SPS1P08458 490 aa3.68□□□□□ -1.82
BCD1YHR040W MTF2P10849 440 aa3.68□□□□□ -1.82
BCD1YHR040W SRP54P20424 541 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W UBC1P21734 215 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W SEC65P29478 273 aa3.68□□□□□ -1.82
BCD1YHR040W STO1P34160 861 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W YET1P35723 206 aa3.68□□□□□ -1.82
BCD1YHR040W YKL023WP36103 277 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W YKR018CP36114 725 aa3.68□□□□□ -1.82
BCD1YHR040W OLA1P38219 394 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W YHL041WP38730 149 aa3.68□□□□□ -1.82
BCD1YHR040W MIP6P38760 659 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W CCT4P39078 528 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W VFA1P40080 203 aa3.68□□□□□ -1.82
BCD1YHR040W LYS14P40971 790 aa3.68□□□□□ -1.82
BCD1YHR040W AIP1P46680 615 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W FUS2Q05670 677 aa3.68□□□□□ -1.82
BCD1YHR040W DUS3Q06053 668 aaKnown RBP3.68□□□□□ -1.82
BCD1YHR040W VAC14Q06708 880 aa3.68□□□□□ -1.82
BCD1YHR040W REH1Q06709 432 aa3.68□□□□□ -1.82
BCD1YHR040W RSC58Q07979 502 aa3.68□□□□□ -1.82
BCD1YHR040W YAP7Q08182 245 aa3.68□□□□□ -1.82
BCD1YHR040W DAS2Q12084 232 aa3.68□□□□□ -1.82
BCD1YHR040W YPR071WQ12346 211 aa3.68□□□□□ -1.82
BCD1YHR040W TOM1Q03280 3268 aa3.68□□□□□ -1.82
BCD1YHR040W FLO1P32768 1537 aa3.67□□□□□ -1.82
BCD1YHR040W CDC8P00572 216 aa3.67□□□□□ -1.82
BCD1YHR040W ADE8P04161 214 aa3.67□□□□□ -1.82
BCD1YHR040W CDC31P06704 161 aaKnown RBP3.67□□□□□ -1.82
BCD1YHR040W PCK1P10963 549 aa3.67□□□□□ -1.82
BCD1YHR040W RPO26P20435 155 aa3.67□□□□□ -1.82
BCD1YHR040W RRP43P25359 394 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W CHS3P29465 1165 aa3.67□□□□□ -1.82
BCD1YHR040W PSO2P30620 661 aa3.67□□□□□ -1.82
BCD1YHR040W DBF20P32328 564 aa3.67□□□□□ -1.82
BCD1YHR040W HEM12P32347 362 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W RPS0AP32905 252 aaKnown RBP3.67□□□□□ -1.82
BCD1YHR040W PXL1P36166 706 aa3.67□□□□□ -1.82
BCD1YHR040W POL12P38121 705 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W BIT2P38346 545 aa3.67□□□□□ -1.82
BCD1YHR040W PNT1P38969 423 aa3.67□□□□□ -1.82
BCD1YHR040W PIK1P39104 1066 aa3.67□□□□□ -1.82
BCD1YHR040W ACA1P39970 489 aa3.67□□□□□ -1.82
BCD1YHR040W SHQ1P40486 507 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W SDS3P40505 327 aa3.67□□□□□ -1.82
BCD1YHR040W PXA1P41909 870 aa3.67□□□□□ -1.82
BCD1YHR040W PRP31P49704 494 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W CAF130P53280 1122 aaPredicted RBP3.67□□□□□ -1.82
BCD1YHR040W YGR283CP53336 341 aaPredicted RBP3.67□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 68.2 ms