RNA–Protein interactions for RNA: YFL001W

DEG1, Transcript of tRNA:pseudouridine synthase, yeastyeast

Gene DEG1, Length 1,329 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEG1YFL001W VPS8P39702 1274 aa5.39□□□□□ -1.55
DEG1YFL001W NOP16P40007 231 aaKnown RBP5.39□□□□□ -1.55
DEG1YFL001W FTR1P40088 404 aa5.39□□□□□ -1.55
DEG1YFL001W SAP4P53036 818 aa5.39□□□□□ -1.55
DEG1YFL001W ERG5P54781 538 aa5.39□□□□□ -1.55
DEG1YFL001W CTK1Q03957 528 aaKnown RBP5.39□□□□□ -1.55
DEG1YFL001W YLR224WQ05947 369 aa5.39□□□□□ -1.55
DEG1YFL001W THI22Q06490 572 aa5.39□□□□□ -1.55
DEG1YFL001W IMH1Q06704 911 aaKnown RBP5.39□□□□□ -1.55
DEG1YFL001W SDH5Q08230 162 aa5.39□□□□□ -1.55
DEG1YFL001W TRM8Q12009 286 aa5.39□□□□□ -1.55
DEG1YFL001W ADE3P07245 946 aaKnown RBP5.38□□□□□ -1.55
DEG1YFL001W BIK1P11709 440 aa5.38□□□□□ -1.55
DEG1YFL001W GUK1P15454 187 aaKnown RBP5.38□□□□□ -1.55
DEG1YFL001W RIT1P23796 513 aa5.38□□□□□ -1.55
DEG1YFL001W PAH1P32567 862 aa5.38□□□□□ -1.55
DEG1YFL001W MUD2P36084 527 aaKnown RBP5.38□□□□□ -1.55
DEG1YFL001W POL12P38121 705 aaPredicted RBP5.38□□□□□ -1.55
DEG1YFL001W YER010CP40011 234 aa5.38□□□□□ -1.55
DEG1YFL001W DPH1P40487 425 aaKnown RBP5.38□□□□□ -1.55
DEG1YFL001W BAP3P41815 604 aa5.38□□□□□ -1.55
DEG1YFL001W MTL1P53214 551 aa5.38□□□□□ -1.55
DEG1YFL001W ARA2Q04212 335 aa5.38□□□□□ -1.55
DEG1YFL001W AIM41Q12032 185 aa5.38□□□□□ -1.55
DEG1YFL001W PCK1P10963 549 aa5.37□□□□□ -1.55
DEG1YFL001W SEC15P22224 910 aa5.37□□□□□ -1.55
DEG1YFL001W SAN1P22470 610 aa5.37□□□□□ -1.55
DEG1YFL001W PRP45P28004 379 aaPredicted RBP5.37□□□□□ -1.55
DEG1YFL001W CBF2P32504 956 aa5.37□□□□□ -1.55
DEG1YFL001W NFU1P32860 256 aa5.37□□□□□ -1.55
DEG1YFL001W SET3P36124 751 aa5.37□□□□□ -1.55
DEG1YFL001W FSH1P38777 243 aaKnown RBP5.37□□□□□ -1.55
DEG1YFL001W SFB3P38810 929 aa5.37□□□□□ -1.55
DEG1YFL001W UME6P39001 836 aa5.37□□□□□ -1.55
DEG1YFL001W POL31P46957 487 aa5.37□□□□□ -1.55
DEG1YFL001W UPF3P48412 387 aaKnown RBP5.37□□□□□ -1.55
DEG1YFL001W PRP43P53131 767 aaKnown RBP5.37□□□□□ -1.55
DEG1YFL001W FDC1Q03034 503 aa5.37□□□□□ -1.55
DEG1YFL001W ESC8Q08119 714 aa5.37□□□□□ -1.55
DEG1YFL001W DFG16Q99234 619 aa5.37□□□□□ -1.55
DEG1YFL001W XRN1P22147 1528 aaKnown RBP5.37□□□□□ -1.55
DEG1YFL001W LAT1P12695 482 aaKnown RBP5.36□□□□□ -1.55
DEG1YFL001W TUP1P16649 713 aa5.36□□□□□ -1.55
DEG1YFL001W BET2P20133 325 aa5.36□□□□□ -1.55
DEG1YFL001W CAB2P40506 365 aa5.36□□□□□ -1.55
DEG1YFL001W YIR042CP40586 236 aa5.36□□□□□ -1.55
DEG1YFL001W FKH2P41813 862 aa5.36□□□□□ -1.55
DEG1YFL001W BST1P43571 1029 aa5.36□□□□□ -1.55
DEG1YFL001W CBK1P53894 756 aa5.36□□□□□ -1.55
DEG1YFL001W GIS1Q03833 894 aa5.36□□□□□ -1.55
DEG1YFL001W ADY4Q05955 493 aa5.36□□□□□ -1.55
DEG1YFL001W ERP4Q12450 207 aa5.36□□□□□ -1.55
DEG1YFL001W ENT1Q12518 454 aa5.36□□□□□ -1.55
DEG1YFL001W FOB1O13329 566 aa5.35□□□□□ -1.55
DEG1YFL001W ARP2P32381 391 aaKnown RBP5.35□□□□□ -1.55
DEG1YFL001W COS111P38308 924 aa5.35□□□□□ -1.55
DEG1YFL001W RIC1P40395 1056 aa5.35□□□□□ -1.55
DEG1YFL001W SPT20P50875 604 aa5.35□□□□□ -1.55
DEG1YFL001W MDG1P53885 366 aa5.35□□□□□ -1.55
DEG1YFL001W TRS31Q03337 283 aa5.35□□□□□ -1.55
DEG1YFL001W YFT2Q06676 274 aa5.35□□□□□ -1.55
DEG1YFL001W ENB1Q08299 606 aa5.35□□□□□ -1.55
DEG1YFL001W SEM1O94742 89 aa5.34□□□□□ -1.55
DEG1YFL001W FUM1P08417 488 aaKnown RBP5.34□□□□□ -1.55
DEG1YFL001W PFK2P16862 959 aaKnown RBP RIP-Chip data5.34□□□□□ -1.55not detected
DEG1YFL001W AAC3P18238 307 aa5.34□□□□□ -1.55
DEG1YFL001W CAD1P24813 409 aaKnown RBP5.34□□□□□ -1.55
DEG1YFL001W FEN2P25621 512 aaKnown RBP5.34□□□□□ -1.55
DEG1YFL001W RAD16P31244 790 aa5.34□□□□□ -1.55
DEG1YFL001W DCG1P32460 244 aa5.34□□□□□ -1.55
DEG1YFL001W EHT1P38295 451 aa5.34□□□□□ -1.55
DEG1YFL001W FMO1P38866 432 aa5.34□□□□□ -1.55
DEG1YFL001W NUP60P39705 539 aa5.34□□□□□ -1.55
DEG1YFL001W YEL068CP39977 110 aa5.34□□□□□ -1.55
DEG1YFL001W VFA1P40080 203 aa5.34□□□□□ -1.55
DEG1YFL001W YIL077CP40508 320 aa5.34□□□□□ -1.55
DEG1YFL001W AMA1P50082 593 aa5.34□□□□□ -1.55
DEG1YFL001W PSP1P50896 841 aaKnown RBP5.34□□□□□ -1.55
DEG1YFL001W VPS64Q03944 604 aa5.34□□□□□ -1.55
DEG1YFL001W GSF2Q04697 403 aaKnown RBP5.34□□□□□ -1.55
DEG1YFL001W CDC16P09798 840 aa5.33□□□□□ -1.56
DEG1YFL001W MRP7P12687 371 aa5.33□□□□□ -1.56
DEG1YFL001W BCS1P32839 456 aa5.33□□□□□ -1.56
DEG1YFL001W TEF4P36008 412 aaKnown RBP5.33□□□□□ -1.56
DEG1YFL001W TEL2P53038 688 aa5.33□□□□□ -1.56
DEG1YFL001W ATG21Q02887 496 aa5.33□□□□□ -1.56
DEG1YFL001W SNO4Q04902 237 aa5.33□□□□□ -1.56
DEG1YFL001W RGC1Q06108 1083 aaKnown RBP5.33□□□□□ -1.56
DEG1YFL001W HSP33Q08914 237 aaKnown RBP5.33□□□□□ -1.56
DEG1YFL001W HSP32Q08992 237 aa5.33□□□□□ -1.56
DEG1YFL001W LAS17Q12446 633 aa5.33□□□□□ -1.56
DEG1YFL001W ECM5Q03214 1411 aa5.33□□□□□ -1.56
DEG1YFL001W RPS13P05756 151 aaKnown RBP5.32□□□□□ -1.56
DEG1YFL001W SEC12P11655 471 aa5.32□□□□□ -1.56
DEG1YFL001W VPS33P20795 691 aa5.32□□□□□ -1.56
DEG1YFL001W GAS1P22146 559 aaKnown RBP5.32□□□□□ -1.56
DEG1YFL001W PIG2P40187 538 aa5.32□□□□□ -1.56
DEG1YFL001W LRO1P40345 661 aa5.32□□□□□ -1.56
DEG1YFL001W TIM50Q02776 476 aa5.32□□□□□ -1.56
DEG1YFL001W SPC19Q03954 165 aa5.32□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 62.3 ms