RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W AIM41Q12032 185 aa5.6□□□□□ -1.51
UBC6YER100W CYC7P00045 113 aa5.59□□□□□ -1.51
UBC6YER100W PEX1P24004 1043 aa5.59□□□□□ -1.51
UBC6YER100W ARP2P32381 391 aaKnown RBP5.59□□□□□ -1.51
UBC6YER100W SAC6P32599 642 aaKnown RBP5.59□□□□□ -1.51
UBC6YER100W CTF13P35203 478 aa5.59□□□□□ -1.51
UBC6YER100W COX18P53239 316 aa5.59□□□□□ -1.51
UBC6YER100W YGR130CP53278 816 aa5.59□□□□□ -1.51
UBC6YER100W SNO2P53823 222 aa5.59□□□□□ -1.51
UBC6YER100W ATG21Q02887 496 aa5.59□□□□□ -1.51
UBC6YER100W TAF11Q04226 346 aa5.59□□□□□ -1.51
UBC6YER100W SNO4Q04902 237 aa5.59□□□□□ -1.51
UBC6YER100W YLR287CQ05881 355 aa5.59□□□□□ -1.51
UBC6YER100W DUS4Q06063 367 aa5.59□□□□□ -1.51
UBC6YER100W HSP33Q08914 237 aaKnown RBP5.59□□□□□ -1.51
UBC6YER100W HSP32Q08992 237 aa5.59□□□□□ -1.51
UBC6YER100W NBP2Q12163 236 aa5.59□□□□□ -1.51
UBC6YER100W TAH18Q12181 623 aa5.59□□□□□ -1.51
UBC6YER100W NPC2Q12408 173 aa5.59□□□□□ -1.51
UBC6YER100W ZRT2Q12436 422 aa5.59□□□□□ -1.51
UBC6YER100W YPR053CQ6Q5F3 151 aa5.59□□□□□ -1.51
UBC6YER100W HRP1Q99383 534 aaKnown RBP5.59□□□□□ -1.51
UBC6YER100W OLE1P21147 510 aaKnown RBP5.58□□□□□ -1.52
UBC6YER100W CNS1P33313 385 aa5.58□□□□□ -1.52
UBC6YER100W UBS1P38290 277 aa5.58□□□□□ -1.52
UBC6YER100W RPP1P38786 293 aa5.58□□□□□ -1.52
UBC6YER100W CRG1P38892 291 aaRIP-Chip data5.58□□□□□ -1.52not detected
UBC6YER100W VFA1P40080 203 aa5.58□□□□□ -1.52
UBC6YER100W FTR1P40088 404 aa5.58□□□□□ -1.52
UBC6YER100W KHA1P40309 873 aa5.58□□□□□ -1.52
UBC6YER100W GTF1P53260 183 aaPredicted RBP5.58□□□□□ -1.52
UBC6YER100W BSC5P53755 489 aa5.58□□□□□ -1.52
UBC6YER100W MRPL19P53875 158 aa5.58□□□□□ -1.52
UBC6YER100W TRS31Q03337 283 aa5.58□□□□□ -1.52
UBC6YER100W VPS64Q03944 604 aa5.58□□□□□ -1.52
UBC6YER100W THI22Q06490 572 aa5.58□□□□□ -1.52
UBC6YER100W GPB1Q08886 897 aa5.58□□□□□ -1.52
UBC6YER100W TGL5Q12043 749 aa5.58□□□□□ -1.52
UBC6YER100W RPS9BP05755 195 aaKnown RBP5.57□□□□□ -1.52
UBC6YER100W ERG6P25087 383 aaKnown RBP5.57□□□□□ -1.52
UBC6YER100W EMC1P25574 760 aa5.57□□□□□ -1.52
UBC6YER100W PGS1P25578 521 aa5.57□□□□□ -1.52
UBC6YER100W DHR2P36009 735 aaPredicted RBP5.57□□□□□ -1.52
UBC6YER100W SFB3P38810 929 aa5.57□□□□□ -1.52
UBC6YER100W GET2P40056 285 aa5.57□□□□□ -1.52
UBC6YER100W BAP3P41815 604 aa5.57□□□□□ -1.52
UBC6YER100W SIP4P46954 829 aa5.57□□□□□ -1.52
UBC6YER100W CSL4P53859 292 aaPredicted RBP5.57□□□□□ -1.52
UBC6YER100W CTK1Q03957 528 aaKnown RBP5.57□□□□□ -1.52
UBC6YER100W SXM1Q04175 944 aaKnown RBP5.57□□□□□ -1.52
UBC6YER100W YOR352WQ08816 343 aa5.57□□□□□ -1.52
UBC6YER100W ECM3Q99252 613 aa5.57□□□□□ -1.52
UBC6YER100W HSP82P02829 709 aaKnown RBP5.56□□□□□ -1.52
UBC6YER100W RPL19AP0CX82 189 aaKnown RBP5.56□□□□□ -1.52
UBC6YER100W RPL19BP0CX83 189 aaPredicted RBP5.56□□□□□ -1.52
UBC6YER100W PRE10P21242 288 aaKnown RBP RIP-Chip data5.56□□□□□ -1.52not detected
UBC6YER100W SGF29P25554 259 aa5.56□□□□□ -1.52
UBC6YER100W DCG1P32460 244 aa5.56□□□□□ -1.52
UBC6YER100W PEX5P35056 612 aa5.56□□□□□ -1.52
UBC6YER100W ETP1P38748 585 aaKnown RBP5.56□□□□□ -1.52
UBC6YER100W UTP9P38882 575 aaKnown RBP5.56□□□□□ -1.52
UBC6YER100W MEF2P39677 819 aa5.56□□□□□ -1.52
UBC6YER100W RMD8P43620 662 aa5.56□□□□□ -1.52
UBC6YER100W ARC1P46672 376 aaKnown RBP5.56□□□□□ -1.52
UBC6YER100W GCV2P49095 1034 aa5.56□□□□□ -1.52
UBC6YER100W ROT1Q03691 256 aa5.56□□□□□ -1.52
UBC6YER100W RCO1Q04779 684 aa5.56□□□□□ -1.52
UBC6YER100W RXT3Q07458 294 aa5.56□□□□□ -1.52
UBC6YER100W VAM6Q07468 1049 aa5.56□□□□□ -1.52
UBC6YER100W AIM6Q07716 390 aa5.56□□□□□ -1.52
UBC6YER100W GRC3Q07845 632 aa5.56□□□□□ -1.52
UBC6YER100W YDL177CQ12257 170 aa5.56□□□□□ -1.52
UBC6YER100W TPK1P06244 397 aa5.55□□□□□ -1.52
UBC6YER100W SEC15P22224 910 aa5.55□□□□□ -1.52
UBC6YER100W ESL2P36168 1195 aa5.55□□□□□ -1.52
UBC6YER100W TOS1P38288 455 aa5.55□□□□□ -1.52
UBC6YER100W YBR225WP38321 900 aa5.55□□□□□ -1.52
UBC6YER100W YJR061WP40355 935 aa5.55□□□□□ -1.52
UBC6YER100W TIM10P87108 93 aa5.55□□□□□ -1.52
UBC6YER100W FCP1Q03254 732 aa5.55□□□□□ -1.52
UBC6YER100W YDR132CQ03900 495 aa5.55□□□□□ -1.52
UBC6YER100W SKM1Q12469 655 aa5.55□□□□□ -1.52
UBC6YER100W HSH49Q99181 213 aaPredicted RBP5.55□□□□□ -1.52
UBC6YER100W RPB2P08518 1224 aaKnown RBP5.54□□□□□ -1.52
UBC6YER100W SEC12P11655 471 aa5.54□□□□□ -1.52
UBC6YER100W LAT1P12695 482 aaKnown RBP5.54□□□□□ -1.52
UBC6YER100W VPS33P20795 691 aa5.54□□□□□ -1.52
UBC6YER100W LYS9P38999 446 aa5.54□□□□□ -1.52
UBC6YER100W IST3P40565 148 aaPredicted RBP5.54□□□□□ -1.52
UBC6YER100W MRPS35P53292 345 aa5.54□□□□□ -1.52
UBC6YER100W ERG5P54781 538 aa5.54□□□□□ -1.52
UBC6YER100W GCN5Q03330 439 aa5.54□□□□□ -1.52
UBC6YER100W YLR352WQ06479 807 aa5.54□□□□□ -1.52
UBC6YER100W ACK1Q07622 623 aaPredicted RBP5.54□□□□□ -1.52
UBC6YER100W MCA1Q08601 432 aa5.54□□□□□ -1.52
UBC6YER100W COX17Q12287 69 aa5.54□□□□□ -1.52
UBC6YER100W SFI1Q12369 946 aa5.54□□□□□ -1.52
UBC6YER100W GCN4P03069 281 aa5.53□□□□□ -1.52
UBC6YER100W CTT1P06115 562 aa5.53□□□□□ -1.52
UBC6YER100W HOM3P10869 527 aa5.53□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 19.8 ms