RNA–Protein interactions for RNA: YDR432W

NPL3, Transcript of RNA-binding protein, yeast

Gene NPL3, Length 1,245 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NPL3	YDR432W	TDA3	P38758	523 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	LYS9	P38999	446 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	RSM7	P47150	247 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	PEX31	P53203	462 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	TRM112	P53738	135 aa	Predicted RBP	13.2	□□□□□ -0.3
NPL3	YDR432W	LCB5	Q06147	687 aa	Known RBP	13.2	□□□□□ -0.3
NPL3	YDR432W	YDL073W	Q07454	984 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	13.2	□□□□□ -0.3	not detected
NPL3	YDR432W	BI3	Q9ZZW7	517 aa		13.2	□□□□□ -0.3
NPL3	YDR432W	CUP1-1	P0CX80	61 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	CUP1-2	P0CX81	61 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	SEC1	P30619	724 aa	Known RBP	13.19	□□□□□ -0.3
NPL3	YDR432W	TYE7	P33122	291 aa	Predicted RBP	13.19	□□□□□ -0.3
NPL3	YDR432W	SRX1	P36077	127 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	BAT1	P38891	393 aa	Known RBP	13.19	□□□□□ -0.3
NPL3	YDR432W	SAP185	P40856	1058 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	KTR6	P54070	446 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	UME1	Q03010	460 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	SXM1	Q04175	944 aa	Known RBP	13.19	□□□□□ -0.3
NPL3	YDR432W	YLR287C	Q05881	355 aa		13.19	□□□□□ -0.3
NPL3	YDR432W	RRP6	Q12149	733 aa	Known RBP	13.19	□□□□□ -0.3
NPL3	YDR432W	EST1	P17214	699 aa	Predicted RBP	13.18	□□□□□ -0.3
NPL3	YDR432W	YJU3	P28321	313 aa		13.18	□□□□□ -0.3
NPL3	YDR432W	URA8	P38627	578 aa	Predicted RBP	13.18	□□□□□ -0.3
NPL3	YDR432W	VAC8	P39968	578 aa		13.18	□□□□□ -0.3
NPL3	YDR432W	VFA1	P40080	203 aa		13.18	□□□□□ -0.3
NPL3	YDR432W	TMA108	P40462	946 aa		13.18	□□□□□ -0.3
NPL3	YDR432W	RAD3	P06839	778 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	TUP1	P16649	713 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	YPT35	P38815	214 aa	Known RBP	13.17	□□□□□ -0.3
NPL3	YDR432W	LAM1	P38851	1228 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	PRM9	P39551	298 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	TAD1	P53065	400 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	ERV41	Q04651	352 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	HEL2	Q05580	639 aa	Known RBP	13.17	□□□□□ -0.3
NPL3	YDR432W	YCS4	Q06156	1176 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	YOR059C	Q08448	450 aa	Known RBP	13.17	□□□□□ -0.3
NPL3	YDR432W	APL4	Q12028	832 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	ATG9	Q12142	997 aa		13.17	□□□□□ -0.3
NPL3	YDR432W	YER189W	P40104	122 aa		13.16	□□□□□ -0.3
NPL3	YDR432W	TAN1	P53072	289 aa	Predicted RBP	13.16	□□□□□ -0.3
NPL3	YDR432W	RPN4	Q03465	531 aa		13.16	□□□□□ -0.3
NPL3	YDR432W	RSB1	Q08417	382 aa		13.16	□□□□□ -0.3
NPL3	YDR432W	YPK1	P12688	680 aa	Known RBP	13.15	□□□□□ -0.3
NPL3	YDR432W	PXA2	P34230	853 aa		13.15	□□□□□ -0.3
NPL3	YDR432W	MRPL40	P36534	297 aa		13.15	□□□□□ -0.3
NPL3	YDR432W	YGR283C	P53336	341 aa	Predicted RBP	13.15	□□□□□ -0.3
NPL3	YDR432W	SND1	Q04007	877 aa		13.15	□□□□□ -0.3
NPL3	YDR432W	KAR3	P17119	729 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	SPO12	P17123	173 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	RRN6	P32786	894 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	FSH1	P38777	243 aa	Known RBP	13.14	□□□□□ -0.31
NPL3	YDR432W	SAK1	P38990	1142 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	EDC3	P39998	551 aa	Known RBP	13.14	□□□□□ -0.31
NPL3	YDR432W	YAP5	P40574	245 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	AIM23	P47015	356 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	YGR111W	P53265	400 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	YDR222W	Q04925	415 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	YRR1	Q12172	810 aa		13.14	□□□□□ -0.31
NPL3	YDR432W	HIS1	P00498	297 aa	Known RBP	13.13	□□□□□ -0.31
NPL3	YDR432W	HSF1	P10961	833 aa		13.13	□□□□□ -0.31
NPL3	YDR432W	MET16	P18408	261 aa	Predicted RBP	13.13	□□□□□ -0.31
NPL3	YDR432W	DAL81	P21657	970 aa		13.13	□□□□□ -0.31
NPL3	YDR432W	RRP43	P25359	394 aa	Predicted RBP	13.13	□□□□□ -0.31
NPL3	YDR432W	SMC2	P38989	1170 aa	Known RBP	13.13	□□□□□ -0.31
NPL3	YDR432W	MMM1	P41800	426 aa		13.13	□□□□□ -0.31
NPL3	YDR432W	YNL108C	P53929	270 aa		13.13	□□□□□ -0.31
NPL3	YDR432W	ARA2	Q04212	335 aa		13.13	□□□□□ -0.31
NPL3	YDR432W	RML2	P32611	393 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	KAP104	P38217	918 aa	Known RBP	13.12	□□□□□ -0.31
NPL3	YDR432W	COQ5	P49017	307 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	YMR187C	Q03236	431 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	GRX8	Q05926	109 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	PEX15	Q08215	383 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	PER33	Q12144	273 aa		13.12	□□□□□ -0.31
NPL3	YDR432W	ENO1	P00924	437 aa	Known RBP	13.11	□□□□□ -0.31
NPL3	YDR432W	JNM1	P36224	373 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	FUI1	P38196	639 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	WSC4	P38739	605 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	ATG3	P40344	310 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	YIL054W	P40524	105 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	OSW7	P43611	510 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	YMR1	P47147	688 aa	Known RBP RIP-Chip data	13.11	□□□□□ -0.31	not detected
NPL3	YDR432W	NPY1	P53164	384 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	DOS2	P54858	310 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	ADI1	Q03677	179 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	THI21	Q08975	551 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	YLR046C	Q12253	270 aa		13.11	□□□□□ -0.31
NPL3	YDR432W	MIS1	P09440	975 aa	Known RBP	13.1	□□□□□ -0.31
NPL3	YDR432W	MFT1	P33441	392 aa	Known RBP	13.1	□□□□□ -0.31
NPL3	YDR432W	PCH2	P38126	564 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	SWC5	P38326	303 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	YHR078W	P38799	552 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	CNN1	P43618	361 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	SNG1	P46950	547 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	ELP3	Q02908	557 aa	Known RBP	13.1	□□□□□ -0.31
NPL3	YDR432W	RKM2	Q03942	479 aa		13.1	□□□□□ -0.31
NPL3	YDR432W	APL5	Q08951	932 aa	Known RBP	13.1	□□□□□ -0.31
NPL3	YDR432W	SEC63	P14906	663 aa		13.09	□□□□□ -0.31
NPL3	YDR432W	UTH1	P36135	365 aa		13.09	□□□□□ -0.31

Retrieved 100 of 5,963 RNA–protein pairs in 27.5 ms