RNA–Protein interactions for RNA: YDR177W

UBC1, Transcript of Ubiquitin-conjugating enzyme, yeastyeast

Gene UBC1, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC1YDR177W SKP2P42843 763 aa5.17□□□□□ -1.58
UBC1YDR177W GSM1P42950 618 aa5.17□□□□□ -1.58
UBC1YDR177W BIT61P47041 543 aa5.17□□□□□ -1.58
UBC1YDR177W YGR035CP53222 116 aa5.17□□□□□ -1.58
UBC1YDR177W YAP1802P53309 568 aa5.17□□□□□ -1.58
UBC1YDR177W CLU1Q03690 1277 aaKnown RBP5.17□□□□□ -1.58
UBC1YDR177W SSY1Q03770 852 aa5.17□□□□□ -1.58
UBC1YDR177W TFC6Q06339 672 aa5.17□□□□□ -1.58
UBC1YDR177W CKA1P15790 372 aa5.16□□□□□ -1.58
UBC1YDR177W ARG1P22768 420 aa5.16□□□□□ -1.58
UBC1YDR177W PRE4P30657 266 aa5.16□□□□□ -1.58
UBC1YDR177W ARP2P32381 391 aaKnown RBP5.16□□□□□ -1.58
UBC1YDR177W FRD1P32614 470 aaKnown RBP5.16□□□□□ -1.58
UBC1YDR177W YKL100CP34248 587 aa5.16□□□□□ -1.58
UBC1YDR177W BYE1P36106 594 aa5.16□□□□□ -1.58
UBC1YDR177W YBR225WP38321 900 aa5.16□□□□□ -1.58
UBC1YDR177W YEL025CP39991 1188 aa5.16□□□□□ -1.58
UBC1YDR177W AXL1P40851 1208 aa5.16□□□□□ -1.58
UBC1YDR177W RMD8P43620 662 aa5.16□□□□□ -1.58
UBC1YDR177W PSP1P50896 841 aaKnown RBP5.16□□□□□ -1.58
UBC1YDR177W VPS9P54787 451 aa5.16□□□□□ -1.58
UBC1YDR177W TIM10P87108 93 aa5.16□□□□□ -1.58
UBC1YDR177W GAD1Q04792 585 aa5.16□□□□□ -1.58
UBC1YDR177W MFB1Q04922 465 aa5.16□□□□□ -1.58
UBC1YDR177W TPO1Q07824 586 aa5.16□□□□□ -1.58
UBC1YDR177W NUS1Q12063 375 aa5.16□□□□□ -1.58
UBC1YDR177W UPC2Q12151 913 aa5.16□□□□□ -1.58
UBC1YDR177W COX17Q12287 69 aa5.16□□□□□ -1.58
UBC1YDR177W POM34Q12445 299 aa5.16□□□□□ -1.58
UBC1YDR177W RVB2Q12464 471 aaKnown RBP5.16□□□□□ -1.58
UBC1YDR177W PDX1P16451 410 aa5.15□□□□□ -1.59
UBC1YDR177W SPO16P17122 198 aa5.15□□□□□ -1.59
UBC1YDR177W OLE1P21147 510 aaKnown RBP5.15□□□□□ -1.59
UBC1YDR177W SWI4P25302 1093 aaKnown RBP5.15□□□□□ -1.59
UBC1YDR177W OCA4P25366 362 aa5.15□□□□□ -1.59
UBC1YDR177W SET3P36124 751 aa5.15□□□□□ -1.59
UBC1YDR177W ABZ1P37254 787 aaPredicted RBP5.15□□□□□ -1.59
UBC1YDR177W MCX1P38323 520 aaPredicted RBP5.15□□□□□ -1.59
UBC1YDR177W JEM1P40358 645 aa5.15□□□□□ -1.59
UBC1YDR177W DJP1P40564 432 aa5.15□□□□□ -1.59
UBC1YDR177W MET12P46151 657 aa5.15□□□□□ -1.59
UBC1YDR177W RRT6P53117 311 aaPredicted RBP5.15□□□□□ -1.59
UBC1YDR177W NRG1Q03125 231 aa5.15□□□□□ -1.59
UBC1YDR177W RCR2Q03446 210 aaKnown RBP5.15□□□□□ -1.59
UBC1YDR177W CTK1Q03957 528 aaKnown RBP5.15□□□□□ -1.59
UBC1YDR177W HPF1Q05164 967 aa5.15□□□□□ -1.59
UBC1YDR177W RCN2Q12044 265 aa5.15□□□□□ -1.59
UBC1YDR177W GPR1Q12361 961 aa5.15□□□□□ -1.59
UBC1YDR177W ERG27Q12452 347 aaKnown RBP5.15□□□□□ -1.59
UBC1YDR177W YBR126W-AQ8TGU7 68 aa5.15□□□□□ -1.59
UBC1YDR177W INO80P53115 1489 aa5.14□□□□□ -1.59
UBC1YDR177W CYC1P00044 109 aaPredicted RBP5.14□□□□□ -1.59
UBC1YDR177W PET122P10355 254 aa5.14□□□□□ -1.59
UBC1YDR177W RNR1P21524 888 aaKnown RBP5.14□□□□□ -1.59
UBC1YDR177W SFB3P38810 929 aa5.14□□□□□ -1.59
UBC1YDR177W ACS1Q01574 713 aa5.14□□□□□ -1.59
UBC1YDR177W TRS31Q03337 283 aa5.14□□□□□ -1.59
UBC1YDR177W HMO1Q03973 246 aaKnown RBP5.14□□□□□ -1.59
UBC1YDR177W RCO1Q04779 684 aa5.14□□□□□ -1.59
UBC1YDR177W ARP9Q05123 467 aa5.14□□□□□ -1.59
UBC1YDR177W ASM4Q05166 528 aa5.14□□□□□ -1.59
UBC1YDR177W VPS36Q06696 566 aa5.14□□□□□ -1.59
UBC1YDR177W ADY3Q07732 790 aa5.14□□□□□ -1.59
UBC1YDR177W GPB1Q08886 897 aa5.14□□□□□ -1.59
UBC1YDR177W LYS21Q12122 440 aaKnown RBP5.14□□□□□ -1.59
UBC1YDR177W ISA2Q12425 185 aa5.14□□□□□ -1.59
UBC1YDR177W NOP58Q12499 511 aaKnown RBP5.14□□□□□ -1.59
UBC1YDR177W MON2P48563 1636 aaPredicted RBP5.14□□□□□ -1.59
UBC1YDR177W GAL10P04397 699 aa5.13□□□□□ -1.59
UBC1YDR177W HIS5P07172 385 aa5.13□□□□□ -1.59
UBC1YDR177W GBP2P25555 427 aaKnown RBP RIP-Chip data5.13□□□□□ -1.59not detected
UBC1YDR177W PEP3P27801 918 aa5.13□□□□□ -1.59
UBC1YDR177W ANP1P32629 500 aa5.13□□□□□ -1.59
UBC1YDR177W SAS3P34218 831 aa5.13□□□□□ -1.59
UBC1YDR177W RMA1P36001 430 aaKnown RBP5.13□□□□□ -1.59
UBC1YDR177W CAJ1P39101 391 aa5.13□□□□□ -1.59
UBC1YDR177W POL31P46957 487 aa5.13□□□□□ -1.59
UBC1YDR177W ZAP1P47043 880 aa5.13□□□□□ -1.59
UBC1YDR177W ASE1P50275 885 aa5.13□□□□□ -1.59
UBC1YDR177W COG1P53079 417 aa5.13□□□□□ -1.59
UBC1YDR177W DUO1P53168 247 aaKnown RBP5.13□□□□□ -1.59
UBC1YDR177W YPL071CQ02864 156 aa5.13□□□□□ -1.59
UBC1YDR177W ADY4Q05955 493 aa5.13□□□□□ -1.59
UBC1YDR177W UTP21Q06078 939 aaPredicted RBP5.13□□□□□ -1.59
UBC1YDR177W PEX19Q07418 342 aa5.13□□□□□ -1.59
UBC1YDR177W WHI4Q07655 649 aaKnown RBP5.13□□□□□ -1.59
UBC1YDR177W TRM11Q12463 433 aa5.13□□□□□ -1.59
UBC1YDR177W PWP1P21304 576 aaKnown RBP5.12□□□□□ -1.59
UBC1YDR177W RPC53P25441 422 aa5.12□□□□□ -1.59
UBC1YDR177W CTF13P35203 478 aa5.12□□□□□ -1.59
UBC1YDR177W TAT1P38085 619 aa5.12□□□□□ -1.59
UBC1YDR177W YHR112CP38716 378 aa5.12□□□□□ -1.59
UBC1YDR177W SLN1P39928 1220 aaPredicted RBP5.12□□□□□ -1.59
UBC1YDR177W TPA1P40032 644 aaKnown RBP5.12□□□□□ -1.59
UBC1YDR177W ATP22P50273 684 aaPredicted RBP5.12□□□□□ -1.59
UBC1YDR177W NNF2P53253 936 aa5.12□□□□□ -1.59
UBC1YDR177W YNR061CP53747 219 aa5.12□□□□□ -1.59
UBC1YDR177W FDC1Q03034 503 aa5.12□□□□□ -1.59
UBC1YDR177W CTI6Q08923 506 aa5.12□□□□□ -1.59
UBC1YDR177W ARG3P05150 338 aa5.11□□□□□ -1.59
Retrieved 100 of 5,963 RNA–protein pairs in 15.9 ms