RNA–Protein interactions for RNA: YDL223C

HBT1, Transcript of Shmoo tip protein, substrate of Hub1p ubiquitin-like protein, yeast

Gene HBT1, Length 3,141 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HBT1	YDL223C	ACO1	P19414	778 aa	Known RBP RIP-Chip data	3.57	□□□□□ -1.84	not detected
HBT1	YDL223C	YCL049C	P25577	312 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	DGR2	P32330	852 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	RRN3	P36070	627 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	VPS8	P39702	1274 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	SAW1	P39735	261 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	GTF1	P53260	183 aa	Predicted RBP	3.57	□□□□□ -1.84
HBT1	YDL223C	ASI2	P53895	289 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	GPD1	Q00055	391 aa	Known RBP	3.57	□□□□□ -1.84
HBT1	YDL223C	BRE4	Q07660	1125 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	PSF3	Q12146	194 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	ARG1	P22768	420 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	MCM3	P24279	971 aa	Known RBP	3.57	□□□□□ -1.84
HBT1	YDL223C	APN2	P38207	520 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	YAP1802	P53309	568 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	SDH5	Q08230	162 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	VHS3	Q08438	674 aa		3.57	□□□□□ -1.84
HBT1	YDL223C	MHP1	P43638	1398 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	URA3	P03962	267 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	CDC6	P09119	513 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	MTF2	P10849	440 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	PYC1	P11154	1178 aa	Known RBP	3.56	□□□□□ -1.84
HBT1	YDL223C	KIN2	P13186	1147 aa	Known RBP	3.56	□□□□□ -1.84
HBT1	YDL223C	FRS1	P15624	595 aa	Known RBP	3.56	□□□□□ -1.84
HBT1	YDL223C	URM1	P40554	99 aa	Predicted RBP	3.56	□□□□□ -1.84
HBT1	YDL223C	EXG2	P52911	562 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	ROT1	Q03691	256 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	FOB1	O13329	566 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	MET8	P15807	274 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	ETP1	P38748	585 aa	Known RBP	3.56	□□□□□ -1.84
HBT1	YDL223C	VID22	Q05934	901 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	ERP4	Q12450	207 aa		3.56	□□□□□ -1.84
HBT1	YDL223C	ADE3	P07245	946 aa	Known RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	PRE4	P30657	266 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	FRD1	P32614	470 aa	Known RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	YGR130C	P53278	816 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	ARG5,6	Q01217	863 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	KIN4	Q01919	800 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	HMO1	Q03973	246 aa	Known RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	ECM3	Q99252	613 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	CTT1	P06115	562 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	YHR033W	P38690	423 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	GET2	P40056	285 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	SMK1	P41808	388 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	NCS6	P53088	359 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	ARA2	Q04212	335 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	RGA2	Q06407	1009 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	RIX7	Q07844	837 aa	Known RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	KCS1	Q12494	1050 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	HRP1	Q99383	534 aa	Known RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	TRP3	P00937	484 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	INH1	P01097	85 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	POL3	P15436	1097 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	IMP2'	P32351	346 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	YEL068C	P39977	110 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	BFA1	P47113	574 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	PRP31	P49704	494 aa	Predicted RBP	3.55	□□□□□ -1.84
HBT1	YDL223C	TIM10	P87108	93 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	ICL2	Q12031	575 aa		3.55	□□□□□ -1.84
HBT1	YDL223C	UBC1	P21734	215 aa	Known RBP	3.54	□□□□□ -1.84
HBT1	YDL223C	RKM3	P38222	552 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	EHT1	P38295	451 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	LYS9	P38999	446 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	PZF1	P39933	429 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	TAF4	P50105	388 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	YBP2	P53169	641 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	NSG2	P53898	299 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	ORC4	P54791	529 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	CDC31	P06704	161 aa	Known RBP	3.54	□□□□□ -1.84
HBT1	YDL223C	CLB4	P24871	460 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	APL2	P36000	726 aa	Predicted RBP	3.54	□□□□□ -1.84
HBT1	YDL223C	CRG1	P38892	291 aa	RIP-Chip data	3.54	□□□□□ -1.84	not detected
HBT1	YDL223C	PRM2	P40534	656 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	NOP9	P47077	666 aa	Known RBP	3.54	□□□□□ -1.84
HBT1	YDL223C	DSD1	P53095	428 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	CTF4	Q01454	927 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	SGD1	Q06132	899 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	SNU66	Q12420	587 aa	Predicted RBP	3.54	□□□□□ -1.84
HBT1	YDL223C	ATG11	Q12527	1178 aa		3.54	□□□□□ -1.84
HBT1	YDL223C	PHO5	P00635	467 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	NUC1	P08466	329 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	MSB1	P21339	1137 aa	Known RBP	3.53	□□□□□ -1.84
HBT1	YDL223C	SIR1	P21691	654 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	PET127	P32606	800 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	BIT61	P47041	543 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	MRPL13	Q02204	264 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	OPY2	Q06810	360 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	RTP1	Q12751	981 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	YLR415C	O13578	112 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	TUP1	P16649	713 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	SDS22	P36047	338 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	ESF2	P53743	316 aa	Known RBP	3.53	□□□□□ -1.84
HBT1	YDL223C	TEX1	P53851	422 aa	Known RBP	3.53	□□□□□ -1.84
HBT1	YDL223C	TIM50	Q02776	476 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	YPL034W	Q03083	165 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	YMR187C	Q03236	431 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	HMI1	Q12039	706 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	TGL5	Q12043	749 aa		3.53	□□□□□ -1.84
HBT1	YDL223C	RNR1	P21524	888 aa	Known RBP	3.53	□□□□□ -1.85
HBT1	YDL223C	RIT1	P23796	513 aa		3.53	□□□□□ -1.85

Retrieved 100 of 5,963 RNA–protein pairs in 45.1 ms