RNA–Protein interactions for RNA: YCL005W-A

VMA9, Transcript of Vacuolar H+ ATPase subunit e of the V-ATPase V0 subcomplex, yeastyeast

Gene VMA9, Length 222 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VMA9YCL005W-A TFG2P41896 400 aaPredicted RBP2.5□□□□□ -2.01
VMA9YCL005W-A BFA1P47113 574 aa2.5□□□□□ -2.01
VMA9YCL005W-A ILM1P47155 203 aa2.5□□□□□ -2.01
VMA9YCL005W-A SHE4P51534 789 aa2.5□□□□□ -2.01
VMA9YCL005W-A PEX14P53112 341 aa2.5□□□□□ -2.01
VMA9YCL005W-A HST1P53685 503 aa2.5□□□□□ -2.01
VMA9YCL005W-A DSL1P53847 754 aa2.5□□□□□ -2.01
VMA9YCL005W-A SKY1Q03656 742 aa2.5□□□□□ -2.01
VMA9YCL005W-A SND1Q04007 877 aa2.5□□□□□ -2.01
VMA9YCL005W-A NGL1Q08213 363 aaKnown RBP2.5□□□□□ -2.01
VMA9YCL005W-A USV1Q12132 391 aa2.5□□□□□ -2.01
VMA9YCL005W-A POM34Q12445 299 aa2.5□□□□□ -2.01
VMA9YCL005W-A YOL087CQ99247 1116 aa2.5□□□□□ -2.01
VMA9YCL005W-A MPD2Q99316 277 aa2.5□□□□□ -2.01
VMA9YCL005W-A YPK9Q12697 1472 aa2.5□□□□□ -2.01
VMA9YCL005W-A PDR10P51533 1564 aa2.49□□□□□ -2.01
VMA9YCL005W-A ERG20P08524 352 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A THR1P17423 357 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A COX11P19516 300 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A BRF1P29056 596 aa2.49□□□□□ -2.01
VMA9YCL005W-A NFU1P32860 256 aa2.49□□□□□ -2.01
VMA9YCL005W-A TFC3P34111 1160 aa2.49□□□□□ -2.01
VMA9YCL005W-A CDS1P38221 457 aa2.49□□□□□ -2.01
VMA9YCL005W-A RFC1P38630 861 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A YHR097CP38809 366 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A BDH2P39713 417 aa2.49□□□□□ -2.01
VMA9YCL005W-A PEA2P40091 420 aa2.49□□□□□ -2.01
VMA9YCL005W-A RNR4P49723 345 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A TEL2P53038 688 aa2.49□□□□□ -2.01
VMA9YCL005W-A PEX8P53248 589 aa2.49□□□□□ -2.01
VMA9YCL005W-A FHN1P53279 174 aa2.49□□□□□ -2.01
VMA9YCL005W-A IST1P53843 298 aaPredicted RBP2.49□□□□□ -2.01
VMA9YCL005W-A YNL247WP53852 767 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A ASI1P54074 624 aa2.49□□□□□ -2.01
VMA9YCL005W-A RCF1Q03713 159 aa2.49□□□□□ -2.01
VMA9YCL005W-A GGA1Q06336 557 aa2.49□□□□□ -2.01
VMA9YCL005W-A BMS1Q08965 1183 aaKnown RBP2.49□□□□□ -2.01
VMA9YCL005W-A IES3Q12345 250 aa2.49□□□□□ -2.01
VMA9YCL005W-A ZRT2Q12436 422 aa2.49□□□□□ -2.01
VMA9YCL005W-A YKL033W-AQ86ZR7 236 aa2.49□□□□□ -2.01
VMA9YCL005W-A TSC11P40061 1430 aa2.49□□□□□ -2.01
VMA9YCL005W-A GEA1P47102 1408 aaPredicted RBP2.49□□□□□ -2.01
VMA9YCL005W-A SWI1P09547 1314 aa2.48□□□□□ -2.01
VMA9YCL005W-A MLP2P40457 1679 aa2.48□□□□□ -2.01
VMA9YCL005W-A NUP159P40477 1460 aa2.48□□□□□ -2.01
VMA9YCL005W-A SCC2Q04002 1493 aa2.48□□□□□ -2.01
VMA9YCL005W-A RPS9BP05755 195 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A RNR2P09938 399 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A YMR085WP0CF18 432 aa2.48□□□□□ -2.01
VMA9YCL005W-A TPM1P17536 199 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A PRE4P30657 266 aa2.48□□□□□ -2.01
VMA9YCL005W-A SWC3P31376 625 aa2.48□□□□□ -2.01
VMA9YCL005W-A PUP2P32379 260 aa2.48□□□□□ -2.01
VMA9YCL005W-A MF(ALPHA)2P32435 120 aa2.48□□□□□ -2.01
VMA9YCL005W-A NUF2P33895 451 aa2.48□□□□□ -2.01
VMA9YCL005W-A ESL2P36168 1195 aa2.48□□□□□ -2.01
VMA9YCL005W-A MRPL10P36520 322 aa2.48□□□□□ -2.01
VMA9YCL005W-A MOH1P38191 138 aa2.48□□□□□ -2.01
VMA9YCL005W-A EHT1P38295 451 aa2.48□□□□□ -2.01
VMA9YCL005W-A COS111P38308 924 aa2.48□□□□□ -2.01
VMA9YCL005W-A CBR1P38626 284 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A YHR033WP38690 423 aa2.48□□□□□ -2.01
VMA9YCL005W-A CRG1P38892 291 aaRIP-Chip data2.48□□□□□ -2.01not detected
VMA9YCL005W-A CAJ1P39101 391 aa2.48□□□□□ -2.01
VMA9YCL005W-A TMN3P40071 706 aa2.48□□□□□ -2.01
VMA9YCL005W-A IAH1P41734 238 aa2.48□□□□□ -2.01
VMA9YCL005W-A SEC27P41811 889 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A CCT7P42943 550 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A MPS3P47069 682 aa2.48□□□□□ -2.01
VMA9YCL005W-A TAF4P50105 388 aa2.48□□□□□ -2.01
VMA9YCL005W-A GND2P53319 492 aa2.48□□□□□ -2.01
VMA9YCL005W-A ESF2P53743 316 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A VMS1Q04311 632 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A TMN2Q04562 672 aa2.48□□□□□ -2.01
VMA9YCL005W-A VBA4Q04602 768 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A ERB1Q04660 807 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A SML1Q04964 104 aa2.48□□□□□ -2.01
VMA9YCL005W-A YFT2Q06676 274 aa2.48□□□□□ -2.01
VMA9YCL005W-A TLG2Q08144 397 aa2.48□□□□□ -2.01
VMA9YCL005W-A BUD21Q08492 214 aaPredicted RBP2.48□□□□□ -2.01
VMA9YCL005W-A SLK19Q08581 821 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A CWC2Q12046 339 aaPredicted RBP2.48□□□□□ -2.01
VMA9YCL005W-A CHS5Q12114 671 aaKnown RBP2.48□□□□□ -2.01
VMA9YCL005W-A PNS1Q12412 539 aa2.48□□□□□ -2.01
VMA9YCL005W-A NKP1Q12493 238 aa2.48□□□□□ -2.01
VMA9YCL005W-A NUP170P38181 1502 aa2.47□□□□□ -2.01
VMA9YCL005W-A POL1P13382 1468 aa2.47□□□□□ -2.01
VMA9YCL005W-A YEL076C-AP0CX16 216 aa2.47□□□□□ -2.01
VMA9YCL005W-A YLR464WP0CX17 216 aa2.47□□□□□ -2.01
VMA9YCL005W-A CLB4P24871 460 aa2.47□□□□□ -2.01
VMA9YCL005W-A CDC10P25342 322 aaKnown RBP2.47□□□□□ -2.01
VMA9YCL005W-A BUD14P27637 709 aa2.47□□□□□ -2.01
VMA9YCL005W-A DGR2P32330 852 aa2.47□□□□□ -2.01
VMA9YCL005W-A RAD5P32849 1169 aaPredicted RBP2.47□□□□□ -2.01
VMA9YCL005W-A SKI2P35207 1287 aaKnown RBP RIP-Chip data2.47□□□□□ -2.01not detected
VMA9YCL005W-A RMA1P36001 430 aaKnown RBP2.47□□□□□ -2.01
VMA9YCL005W-A REV7P38927 245 aa2.47□□□□□ -2.01
VMA9YCL005W-A YEL076CP39971 216 aa2.47□□□□□ -2.01
VMA9YCL005W-A FTR1P40088 404 aa2.47□□□□□ -2.01
VMA9YCL005W-A PIG2P40187 538 aa2.47□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms