RNA–Protein interactions for RNA: YCL005W

LDB16, Transcript of Protein of unknown function, yeastyeast

Gene LDB16, Length 771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB16YCL005W YMC2P38087 329 aa6.72□□□□□ -1.33
LDB16YCL005W TIF5P38431 405 aaKnown RBP6.72□□□□□ -1.33
LDB16YCL005W YER186CP40101 306 aa6.72□□□□□ -1.33
LDB16YCL005W YJR054WP47114 497 aa6.72□□□□□ -1.33
LDB16YCL005W ALT2P52892 507 aa6.72□□□□□ -1.33
LDB16YCL005W MND1P53102 219 aa6.72□□□□□ -1.33
LDB16YCL005W RIM8P53179 542 aa6.72□□□□□ -1.33
LDB16YCL005W YGL036WP53185 909 aaPredicted RBP6.72□□□□□ -1.33
LDB16YCL005W NOP13P53883 403 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
LDB16YCL005W UTP6Q02354 440 aaKnown RBP6.72□□□□□ -1.33
LDB16YCL005W RNT1Q02555 471 aa6.72□□□□□ -1.33
LDB16YCL005W IVY1Q04934 453 aa6.72□□□□□ -1.33
LDB16YCL005W YPR027CQ12079 277 aa6.72□□□□□ -1.33
LDB16YCL005W RUD3Q12234 484 aaKnown RBP6.72□□□□□ -1.33
LDB16YCL005W PCD1Q12524 340 aa6.72□□□□□ -1.33
LDB16YCL005W RAD1P06777 1100 aa6.71□□□□□ -1.34
LDB16YCL005W FPS1P23900 669 aa6.71□□□□□ -1.34
LDB16YCL005W CAP1P28495 268 aaKnown RBP6.71□□□□□ -1.34
LDB16YCL005W DRE2P36152 348 aa6.71□□□□□ -1.34
LDB16YCL005W ECM2P38241 364 aaKnown RBP6.71□□□□□ -1.34
LDB16YCL005W MMS21P38632 267 aa6.71□□□□□ -1.34
LDB16YCL005W END3P39013 349 aa6.71□□□□□ -1.34
LDB16YCL005W GEM1P39722 662 aa6.71□□□□□ -1.34
LDB16YCL005W AFG3P39925 761 aa6.71□□□□□ -1.34
LDB16YCL005W YNL320WP42840 284 aa6.71□□□□□ -1.34
LDB16YCL005W ZAP1P47043 880 aa6.71□□□□□ -1.34
LDB16YCL005W INP52P50942 1183 aa6.71□□□□□ -1.34
LDB16YCL005W PUS2P53167 370 aa6.71□□□□□ -1.34
LDB16YCL005W YGR130CP53278 816 aa6.71□□□□□ -1.34
LDB16YCL005W CUZ1P53899 274 aa6.71□□□□□ -1.34
LDB16YCL005W ULP1Q02724 621 aa6.71□□□□□ -1.34
LDB16YCL005W SXM1Q04175 944 aaKnown RBP6.71□□□□□ -1.34
LDB16YCL005W UFO1Q04511 668 aa6.71□□□□□ -1.34
LDB16YCL005W YDR278CQ05612 105 aa6.71□□□□□ -1.34
LDB16YCL005W EMG1Q06287 252 aaKnown RBP6.71□□□□□ -1.34
LDB16YCL005W RSC2Q06488 889 aa6.71□□□□□ -1.34
LDB16YCL005W YOR059CQ08448 450 aaKnown RBP6.71□□□□□ -1.34
LDB16YCL005W CTF3Q12748 733 aa6.71□□□□□ -1.34
LDB16YCL005W KAR3P17119 729 aa6.7□□□□□ -1.34
LDB16YCL005W EST1P17214 699 aaPredicted RBP6.7□□□□□ -1.34
LDB16YCL005W PRP9P19736 530 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W VBA3P25594 458 aa6.7□□□□□ -1.34
LDB16YCL005W FUB1P25659 250 aa6.7□□□□□ -1.34
LDB16YCL005W KDX1P36005 433 aa6.7□□□□□ -1.34
LDB16YCL005W VBA5P36172 582 aa6.7□□□□□ -1.34
LDB16YCL005W PCM1P38628 557 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W QNS1P38795 714 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W SAP1P39955 897 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W TMN3P40071 706 aa6.7□□□□□ -1.34
LDB16YCL005W INP51P40559 946 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W GCV2P49095 1034 aa6.7□□□□□ -1.34
LDB16YCL005W VPS62P53285 467 aa6.7□□□□□ -1.34
LDB16YCL005W YNR040WP53736 256 aa6.7□□□□□ -1.34
LDB16YCL005W NOG2P53742 486 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W RPL22BP56628 122 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W MZM1Q03429 123 aaPredicted RBP6.7□□□□□ -1.34
LDB16YCL005W SNU56Q03782 492 aaKnown RBP6.7□□□□□ -1.34
LDB16YCL005W STE23Q06010 1027 aa6.7□□□□□ -1.34
LDB16YCL005W CDD1Q06549 142 aa6.7□□□□□ -1.34
LDB16YCL005W DNL4Q08387 944 aaPredicted RBP6.7□□□□□ -1.34
LDB16YCL005W CHS1P08004 1131 aa6.69□□□□□ -1.34
LDB16YCL005W TUB3P09734 445 aaKnown RBP6.69□□□□□ -1.34
LDB16YCL005W HEM1P09950 548 aaPredicted RBP6.69□□□□□ -1.34
LDB16YCL005W SPO16P17122 198 aa6.69□□□□□ -1.34
LDB16YCL005W SFL1P20134 766 aa6.69□□□□□ -1.34
LDB16YCL005W VPS3P23643 1011 aa6.69□□□□□ -1.34
LDB16YCL005W SEC1P30619 724 aaKnown RBP6.69□□□□□ -1.34
LDB16YCL005W PAH1P32567 862 aa6.69□□□□□ -1.34
LDB16YCL005W ECM32P32644 1121 aaKnown RBP6.69□□□□□ -1.34
LDB16YCL005W MRP4P32902 394 aa6.69□□□□□ -1.34
LDB16YCL005W PCA1P38360 1216 aa6.69□□□□□ -1.34
LDB16YCL005W YHL026CP38740 315 aa6.69□□□□□ -1.34
LDB16YCL005W YHL008CP38750 627 aa6.69□□□□□ -1.34
LDB16YCL005W YMR134WP40207 237 aa6.69□□□□□ -1.34
LDB16YCL005W INA22P40576 216 aa6.69□□□□□ -1.34
LDB16YCL005W SNZ3P43545 298 aa6.69□□□□□ -1.34
LDB16YCL005W NMD5P46970 1048 aa6.69□□□□□ -1.34
LDB16YCL005W YJR039WP47107 1121 aa6.69□□□□□ -1.34
LDB16YCL005W YML6P51998 286 aa6.69□□□□□ -1.34
LDB16YCL005W SNZ2P53824 298 aa6.69□□□□□ -1.34
LDB16YCL005W ARO80Q04052 950 aa6.69□□□□□ -1.34
LDB16YCL005W TIF35Q04067 274 aaKnown RBP6.69□□□□□ -1.34
LDB16YCL005W HPF1Q05164 967 aa6.69□□□□□ -1.34
LDB16YCL005W OMS1Q06668 471 aa6.69□□□□□ -1.34
LDB16YCL005W TRE1Q08919 783 aa6.69□□□□□ -1.34
LDB16YCL005W SEY1Q99287 776 aa6.69□□□□□ -1.34
LDB16YCL005W PUT4P15380 627 aa6.68□□□□□ -1.34
LDB16YCL005W TRX1P22217 103 aaKnown RBP6.68□□□□□ -1.34
LDB16YCL005W RSA4P25382 515 aaKnown RBP6.68□□□□□ -1.34
LDB16YCL005W PLC1P32383 869 aa6.68□□□□□ -1.34
LDB16YCL005W RPC37P36121 282 aa6.68□□□□□ -1.34
LDB16YCL005W CCL1P37366 393 aa6.68□□□□□ -1.34
LDB16YCL005W AGP2P38090 596 aa6.68□□□□□ -1.34
LDB16YCL005W PBP2P38151 413 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
LDB16YCL005W VHC1P38329 1120 aa6.68□□□□□ -1.34
LDB16YCL005W MSG5P38590 489 aa6.68□□□□□ -1.34
LDB16YCL005W TVP23P38962 199 aa6.68□□□□□ -1.34
LDB16YCL005W CEM1P39525 442 aa6.68□□□□□ -1.34
LDB16YCL005W CTK3P46963 296 aaPredicted RBP6.68□□□□□ -1.34
LDB16YCL005W STB4P50104 949 aa6.68□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 17.2 ms