RNA–Protein interactions for RNA: ENST00000263351.9

ZNF541-201, Transcript of zinc finger protein 541, humanhuman

TSL 1 (best)

Gene ZNF541, Length 2,573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-201ENST00000263351 PHKA1P46020 1223 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 UBASH3AP57075 661 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 GNL2Q13823 731 aaKnown RBP19.12■□□□□ 0.65
ZNF541-201ENST00000263351 PTPAQ15257 358 aa19.12■□□□□ 0.65
ZNF541-201ENST00000263351 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.12■□□□□ 0.65
ZNF541-201ENST00000263351 A0A0U1RQJ8 604 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 CMA1P23946 247 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 SLC39A14Q15043 492 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 DNAJC10Q8IXB1 793 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 PDILTQ8N807 584 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 ATRIPQ8WXE1 791 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 ASAP1Q9ULH1 1129 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 COL18A1P39060 1754 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 COBLO75128 1261 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 GSDMDP57764 484 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 ATL3Q6DD88 541 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 ZCRB1Q8TBF4 217 aaKnown RBP19.11■□□□□ 0.65
ZNF541-201ENST00000263351 FAM217BQ9NTX9 383 aaPredicted RBP19.11■□□□□ 0.65
ZNF541-201ENST00000263351 PCDHA5Q9Y5H7 936 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 ALS2Q96Q42 1657 aa19.11■□□□□ 0.65
ZNF541-201ENST00000263351 CASP1P29466 404 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 CLCN6P51797 869 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 ARHGAP29Q52LW3 1261 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 APOA5Q6Q788 366 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 USP49Q70CQ1 688 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 ZNF532Q9HCE3 1301 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 ATF3P18847 181 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 LDHAL6AQ6ZMR3 332 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 MAP3K14Q99558 947 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 NUP188Q5SRE5 1749 aa19.1■□□□□ 0.65
ZNF541-201ENST00000263351 RIC1Q4ADV7 1423 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 KIF1AQ12756 1690 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 PRKAB2O43741 272 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 CIAO1O76071 339 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 ADKP55263 362 aaKnown RBP19.09■□□□□ 0.65
ZNF541-201ENST00000263351 FMR1Q06787 632 aaKnown RBP eCLIP19.09■□□□□ 0.65
ZNF541-201ENST00000263351 RRP12Q5JTH9 1297 aaKnown RBP19.09■□□□□ 0.65
ZNF541-201ENST00000263351 NFXL1Q6ZNB6 911 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 DESI2Q9BSY9 194 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 SLC26A6Q9BXS9 759 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 ANGEL1Q9UNK9 670 aaKnown RBP19.09■□□□□ 0.65
ZNF541-201ENST00000263351 hCG_1642624A0A1W2PR95 340 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 BTBD18B2RXH4 712 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 ITGA6P23229 1130 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 IFIT5Q13325 482 aaKnown RBP19.09■□□□□ 0.65
ZNF541-201ENST00000263351 TRIM65Q6PJ69 517 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 ISCA1Q9BUE6 129 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 UBN2Q6ZU65 1347 aa19.09■□□□□ 0.65
ZNF541-201ENST00000263351 SH2B2O14492 632 aaPredicted RBP19.08■□□□□ 0.65
ZNF541-201ENST00000263351 TCIRG1Q13488 830 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 CCDC93Q567U6 631 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 BRAPQ7Z569 592 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 KRT222Q8N1A0 295 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 IRX2Q9BZI1 471 aaPredicted RBP19.08■□□□□ 0.65
ZNF541-201ENST00000263351 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP19.08■□□□□ 0.65
ZNF541-201ENST00000263351 C4AP0C0L4 1744 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 C4BP0C0L5 1744 aa19.08■□□□□ 0.65
ZNF541-201ENST00000263351 FAM205CA6NFA0 338 aa19.08■□□□□ 0.64
ZNF541-201ENST00000263351 URI1O94763 535 aaPredicted RBP19.08■□□□□ 0.64
ZNF541-201ENST00000263351 NR5A1Q13285 461 aa19.08■□□□□ 0.64
ZNF541-201ENST00000263351 CARD6Q9BX69 1037 aa19.08■□□□□ 0.64
ZNF541-201ENST00000263351 L2HGDHQ9H9P8 463 aa19.08■□□□□ 0.64
ZNF541-201ENST00000263351 TMEM94Q12767 1356 aa19.08■□□□□ 0.64
ZNF541-201ENST00000263351 ADD2P35612 726 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 TERF2Q15554 542 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 WDR24Q96S15 920 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 EPB41L4AQ9HCS5 686 aaPredicted RBP19.07■□□□□ 0.64
ZNF541-201ENST00000263351 HPSEQ9Y251 543 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 TFRCP02786 760 aaKnown RBP19.07■□□□□ 0.64
ZNF541-201ENST00000263351 MTF1Q14872 753 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 NTRK3Q16288 839 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 CCDC150Q8NCX0 1101 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 MED15Q96RN5 788 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 PRDM11Q9NQV5 511 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 CNNM1Q9NRU3 951 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 TOMM22Q9NS69 142 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 IMPACTQ9P2X3 320 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 ZMYM6O95789 1325 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 CPDO75976 1380 aa19.07■□□□□ 0.64
ZNF541-201ENST00000263351 KCPQ6ZWJ8 1503 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 DHX16O60231 1041 aaKnown RBP19.06■□□□□ 0.64
ZNF541-201ENST00000263351 TOGARAM2Q6ZUX3 1019 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 REXO1L1PQ8IX06 675 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 TUBE1Q9UJT0 475 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 FHOD1Q9Y613 1164 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 GOLGA8AA7E2F4 631 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 TOB1P50616 345 aaPredicted RBP19.06■□□□□ 0.64
ZNF541-201ENST00000263351 TRDNQ13061 729 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 CNNM3Q8NE01 707 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 OXER1Q8TDS5 423 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 BPIFA3Q9BQP9 254 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 ARMT1Q9H993 441 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 RIPOR2Q9Y4F9 1068 aa19.06■□□□□ 0.64
ZNF541-201ENST00000263351 MST1RQ04912 1400 aa19.05■□□□□ 0.64
ZNF541-201ENST00000263351 MYL5Q02045 173 aa19.05■□□□□ 0.64
ZNF541-201ENST00000263351 TMEM139Q8IV31 216 aa19.05■□□□□ 0.64
ZNF541-201ENST00000263351 IGDCC4Q8TDY8 1250 aa19.05■□□□□ 0.64
ZNF541-201ENST00000263351 GNL3Q9BVP2 549 aaKnown RBP eCLIP19.05■□□□□ 0.64
ZNF541-201ENST00000263351 ZSWIM4Q9H7M6 989 aa19.05■□□□□ 0.64
ZNF541-201ENST00000263351 LY9Q9HBG7 655 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms