RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W BRE5P53741 515 aaKnown RBP7.66□□□□□ -1.18
HDA1YNL021W NOP15P53927 220 aaPredicted RBP7.66□□□□□ -1.18
HDA1YNL021W HDA1P53973 706 aa7.66□□□□□ -1.18
HDA1YNL021W YPL071CQ02864 156 aa7.66□□□□□ -1.18
HDA1YNL021W NUC1P08466 329 aa7.66□□□□□ -1.18
HDA1YNL021W SNF5P18480 905 aa7.66□□□□□ -1.18
HDA1YNL021W OLE1P21147 510 aaKnown RBP7.66□□□□□ -1.18
HDA1YNL021W BEM4P39011 633 aa7.66□□□□□ -1.18
HDA1YNL021W RPN3P40016 523 aaKnown RBP7.66□□□□□ -1.18
HDA1YNL021W AIR1P40507 360 aaKnown RBP7.66□□□□□ -1.18
HDA1YNL021W BTN2P53286 410 aa7.66□□□□□ -1.18
HDA1YNL021W SLM3Q12093 417 aa7.66□□□□□ -1.18
HDA1YNL021W HAL9Q12180 1030 aa7.66□□□□□ -1.18
HDA1YNL021W TCB1Q12466 1186 aa7.66□□□□□ -1.18
HDA1YNL021W ERS1P17261 260 aa7.65□□□□□ -1.18
HDA1YNL021W AKL1P38080 1108 aaKnown RBP7.65□□□□□ -1.18
HDA1YNL021W ROG3P43602 733 aa7.65□□□□□ -1.18
HDA1YNL021W NOG2P53742 486 aaKnown RBP7.65□□□□□ -1.18
HDA1YNL021W ELA1P53861 379 aaPredicted RBP7.65□□□□□ -1.18
HDA1YNL021W YDR131CQ03899 556 aa7.65□□□□□ -1.18
HDA1YNL021W MFB1Q04922 465 aa7.65□□□□□ -1.18
HDA1YNL021W DIN7Q12086 430 aa7.65□□□□□ -1.18
HDA1YNL021W SMC6Q12749 1114 aa7.65□□□□□ -1.18
HDA1YNL021W YIL177CP40434 1758 aa7.65□□□□□ -1.19
HDA1YNL021W YJL225CP40889 1758 aa7.65□□□□□ -1.19
HDA1YNL021W CDC60P26637 1090 aaKnown RBP7.64□□□□□ -1.19
HDA1YNL021W MF(ALPHA)2P32435 120 aa7.64□□□□□ -1.19
HDA1YNL021W ASH1P34233 588 aa7.64□□□□□ -1.19
HDA1YNL021W BYE1P36106 594 aa7.64□□□□□ -1.19
HDA1YNL021W LTP1P40347 161 aa7.64□□□□□ -1.19
HDA1YNL021W SET2P46995 733 aaKnown RBP7.64□□□□□ -1.19
HDA1YNL021W SOK2P53438 785 aaPredicted RBP7.64□□□□□ -1.19
HDA1YNL021W NAM8Q00539 523 aaKnown RBP7.64□□□□□ -1.19
HDA1YNL021W THI21Q08975 551 aa7.64□□□□□ -1.19
HDA1YNL021W PSF3Q12146 194 aa7.64□□□□□ -1.19
HDA1YNL021W DIF1O13577 133 aa7.64□□□□□ -1.19
HDA1YNL021W FUM1P08417 488 aaKnown RBP7.64□□□□□ -1.19
HDA1YNL021W DSD1P53095 428 aa7.64□□□□□ -1.19
HDA1YNL021W CRR1Q05790 422 aa7.64□□□□□ -1.19
HDA1YNL021W RRP9Q06506 573 aaKnown RBP7.64□□□□□ -1.19
HDA1YNL021W FKS3Q04952 1785 aa7.63□□□□□ -1.19
HDA1YNL021W SAS3P34218 831 aa7.63□□□□□ -1.19
HDA1YNL021W LYS14P40971 790 aa7.63□□□□□ -1.19
HDA1YNL021W LEM3P42838 414 aa7.63□□□□□ -1.19
HDA1YNL021W YJL045WP47052 634 aa7.63□□□□□ -1.19
HDA1YNL021W ATP22P50273 684 aaPredicted RBP7.63□□□□□ -1.19
HDA1YNL021W HEF3P53978 1044 aaKnown RBP7.63□□□□□ -1.19
HDA1YNL021W TLG1Q03322 224 aa7.63□□□□□ -1.19
HDA1YNL021W SNO4Q04902 237 aa7.63□□□□□ -1.19
HDA1YNL021W YLR407WQ06070 228 aa7.63□□□□□ -1.19
HDA1YNL021W RCL1Q08096 367 aaPredicted RBP7.63□□□□□ -1.19
HDA1YNL021W HSP33Q08914 237 aaKnown RBP7.63□□□□□ -1.19
HDA1YNL021W HSP32Q08992 237 aa7.63□□□□□ -1.19
HDA1YNL021W URB1P34241 1764 aaKnown RBP7.63□□□□□ -1.19
HDA1YNL021W RED1P14291 827 aa7.63□□□□□ -1.19
HDA1YNL021W SRP72P38688 640 aaKnown RBP7.63□□□□□ -1.19
HDA1YNL021W NUP85P46673 744 aa7.63□□□□□ -1.19
HDA1YNL021W PRP3Q03338 469 aaPredicted RBP7.63□□□□□ -1.19
HDA1YNL021W YLR345WQ06137 509 aa7.63□□□□□ -1.19
HDA1YNL021W YRF1-4O13559 1382 aa7.62□□□□□ -1.19
HDA1YNL021W RPP1AP05318 106 aaPredicted RBP7.62□□□□□ -1.19
HDA1YNL021W VAS1P07806 1104 aaKnown RBP7.62□□□□□ -1.19
HDA1YNL021W YEL076C-AP0CX16 216 aa7.62□□□□□ -1.19
HDA1YNL021W YLR464WP0CX17 216 aa7.62□□□□□ -1.19
HDA1YNL021W PDX1P16451 410 aa7.62□□□□□ -1.19
HDA1YNL021W ORC2P32833 620 aa7.62□□□□□ -1.19
HDA1YNL021W FUN12P39730 1002 aaKnown RBP7.62□□□□□ -1.19
HDA1YNL021W YEL076CP39971 216 aa7.62□□□□□ -1.19
HDA1YNL021W TY1A-DR2Q03964 440 aaKnown RBP7.62□□□□□ -1.19
HDA1YNL021W YLR257WQ06146 321 aaKnown RBP7.62□□□□□ -1.19
HDA1YNL021W AVO1Q08236 1176 aa7.62□□□□□ -1.19
HDA1YNL021W CBP3P21560 335 aa7.61□□□□□ -1.19
HDA1YNL021W SGF29P25554 259 aa7.61□□□□□ -1.19
HDA1YNL021W SDS22P36047 338 aa7.61□□□□□ -1.19
HDA1YNL021W YNL050CP53952 270 aa7.61□□□□□ -1.19
HDA1YNL021W PKH1Q03407 766 aa7.61□□□□□ -1.19
HDA1YNL021W YMR155WQ03795 547 aa7.61□□□□□ -1.19
HDA1YNL021W RTT109Q07794 436 aa7.61□□□□□ -1.19
HDA1YNL021W NSI1Q12457 570 aa7.61□□□□□ -1.19
HDA1YNL021W PHO5P00635 467 aa7.61□□□□□ -1.19
HDA1YNL021W MET17P06106 444 aa7.61□□□□□ -1.19
HDA1YNL021W CKA1P15790 372 aa7.61□□□□□ -1.19
HDA1YNL021W ACO1P19414 778 aaKnown RBP RIP-Chip data7.61□□□□□ -1.19not detected
HDA1YNL021W SWI4P25302 1093 aaKnown RBP7.61□□□□□ -1.19
HDA1YNL021W FLR1P38124 548 aa7.61□□□□□ -1.19
HDA1YNL021W LSC2P53312 427 aa7.61□□□□□ -1.19
HDA1YNL021W SIR4P11978 1358 aa7.61□□□□□ -1.19
HDA1YNL021W CLB4P24871 460 aa7.6□□□□□ -1.19
HDA1YNL021W PPE1P38796 400 aa7.6□□□□□ -1.19
HDA1YNL021W UBP9P39967 754 aa7.6□□□□□ -1.19
HDA1YNL021W JEM1P40358 645 aa7.6□□□□□ -1.19
HDA1YNL021W VTI1Q04338 217 aa7.6□□□□□ -1.19
HDA1YNL021W YPS7Q06325 596 aa7.6□□□□□ -1.19
HDA1YNL021W CSR1Q06705 408 aaKnown RBP7.6□□□□□ -1.19
HDA1YNL021W PUS1Q12211 544 aaKnown RBP7.6□□□□□ -1.19
HDA1YNL021W SET5P38890 526 aaKnown RBP7.6□□□□□ -1.19
HDA1YNL021W BRE2P43132 505 aa7.6□□□□□ -1.19
HDA1YNL021W SIP4P46954 829 aa7.6□□□□□ -1.19
HDA1YNL021W MNT2P53059 558 aa7.6□□□□□ -1.19
HDA1YNL021W HSP42Q12329 375 aa7.6□□□□□ -1.19
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms