RNA–Protein interactions for RNA: YLR164W

SHH4, Transcript of Putative alternate subunit of succinate dehydrogenase (SDH), yeastyeast

Gene SHH4, Length 507 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHH4YLR164W HRD3Q05787 833 aa10.45□□□□□ -0.74
SHH4YLR164W MRI1Q06489 411 aaKnown RBP10.45□□□□□ -0.74
SHH4YLR164W NBP2Q12163 236 aa10.45□□□□□ -0.74
SHH4YLR164W YDR018CQ12185 396 aa10.45□□□□□ -0.74
SHH4YLR164W PMS1P14242 873 aa10.44□□□□□ -0.74
SHH4YLR164W LAS1P36146 502 aaPredicted RBP10.44□□□□□ -0.74
SHH4YLR164W ECM2P38241 364 aaKnown RBP10.44□□□□□ -0.74
SHH4YLR164W PCA1P38360 1216 aa10.44□□□□□ -0.74
SHH4YLR164W TIF5P38431 405 aaKnown RBP10.44□□□□□ -0.74
SHH4YLR164W RAD55P38953 406 aa10.44□□□□□ -0.74
SHH4YLR164W FHL1P39521 936 aa10.44□□□□□ -0.74
SHH4YLR164W YMR134WP40207 237 aa10.44□□□□□ -0.74
SHH4YLR164W YML6P51998 286 aa10.44□□□□□ -0.74
SHH4YLR164W YNL144CP53907 740 aa10.44□□□□□ -0.74
SHH4YLR164W BET4Q00618 327 aa10.44□□□□□ -0.74
SHH4YLR164W UTP6Q02354 440 aaKnown RBP10.44□□□□□ -0.74
SHH4YLR164W MRN1Q08925 612 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
SHH4YLR164W LEA1Q08963 238 aaPredicted RBP10.44□□□□□ -0.74
SHH4YLR164W VPS5Q92331 675 aa10.44□□□□□ -0.74
SHH4YLR164W TAO3P40468 2376 aa10.44□□□□□ -0.74
SHH4YLR164W MEI4P29467 408 aa10.43□□□□□ -0.74
SHH4YLR164W SAK1P38990 1142 aa10.43□□□□□ -0.74
SHH4YLR164W ERP2P39704 215 aa10.43□□□□□ -0.74
SHH4YLR164W TGL3P40308 642 aa10.43□□□□□ -0.74
SHH4YLR164W ARG2P40360 574 aa10.43□□□□□ -0.74
SHH4YLR164W MET13P53128 600 aa10.43□□□□□ -0.74
SHH4YLR164W YML083CQ04526 418 aa10.43□□□□□ -0.74
SHH4YLR164W THI7Q05998 598 aa10.43□□□□□ -0.74
SHH4YLR164W THI20Q08224 551 aa10.43□□□□□ -0.74
SHH4YLR164W SDH5Q08230 162 aa10.43□□□□□ -0.74
SHH4YLR164W APL5Q08951 932 aaKnown RBP10.43□□□□□ -0.74
SHH4YLR164W YKL068W-AQ3E826 78 aa10.43□□□□□ -0.74
SHH4YLR164W PAB1P04147 577 aaKnown RBP RIP-Chip data10.42□□□□□ -0.74not detected
SHH4YLR164W ATP1P07251 545 aaKnown RBP10.42□□□□□ -0.74
SHH4YLR164W PDR1P12383 1068 aa10.42□□□□□ -0.74
SHH4YLR164W CBF1P17106 351 aa10.42□□□□□ -0.74
SHH4YLR164W AIM26P32858 118 aa10.42□□□□□ -0.74
SHH4YLR164W LYS9P38999 446 aa10.42□□□□□ -0.74
SHH4YLR164W SAP1P39955 897 aaKnown RBP10.42□□□□□ -0.74
SHH4YLR164W MAF1P41910 395 aa10.42□□□□□ -0.74
SHH4YLR164W GUF1P46943 645 aa10.42□□□□□ -0.74
SHH4YLR164W HER2Q03557 464 aa10.42□□□□□ -0.74
SHH4YLR164W CDC8P00572 216 aa10.41□□□□□ -0.74
SHH4YLR164W SLY1P22213 666 aa10.41□□□□□ -0.74
SHH4YLR164W URK1P27515 501 aa10.41□□□□□ -0.74
SHH4YLR164W LTV1P34078 463 aa10.41□□□□□ -0.74
SHH4YLR164W VHC1P38329 1120 aa10.41□□□□□ -0.74
SHH4YLR164W KTR6P54070 446 aa10.41□□□□□ -0.74
SHH4YLR164W RKM2Q03942 479 aa10.41□□□□□ -0.74
SHH4YLR164W SPG3Q04398 127 aaPredicted RBP10.41□□□□□ -0.74
SHH4YLR164W THI21Q08975 551 aa10.41□□□□□ -0.74
SHH4YLR164W TAF10Q12030 206 aa10.41□□□□□ -0.74
SHH4YLR164W AHC1Q12433 566 aa10.41□□□□□ -0.74
SHH4YLR164W IZH4Q99393 312 aa10.41□□□□□ -0.74
SHH4YLR164W PEX1P24004 1043 aa10.4□□□□□ -0.74
SHH4YLR164W VPH1P32563 840 aaKnown RBP10.4□□□□□ -0.74
SHH4YLR164W ECM32P32644 1121 aaKnown RBP10.4□□□□□ -0.74
SHH4YLR164W STB5P38699 743 aa10.4□□□□□ -0.74
SHH4YLR164W RRT5P43607 289 aa10.4□□□□□ -0.74
SHH4YLR164W NMA111P53920 997 aa10.4□□□□□ -0.74
SHH4YLR164W PNP1Q05788 311 aa10.4□□□□□ -0.74
SHH4YLR164W ECM22Q05958 814 aaPredicted RBP10.4□□□□□ -0.74
SHH4YLR164W PUF2Q12221 1075 aaKnown RBP RIP-Chip data10.4□□□□□ -0.74not detected
SHH4YLR164W LCB4Q12246 624 aa10.4□□□□□ -0.74
SHH4YLR164W YML002WP0CF17 737 aa10.39□□□□□ -0.75
SHH4YLR164W MAS1P10507 462 aa10.39□□□□□ -0.75
SHH4YLR164W YPK1P12688 680 aaKnown RBP10.39□□□□□ -0.75
SHH4YLR164W PGS1P25578 521 aa10.39□□□□□ -0.75
SHH4YLR164W RAD27P26793 382 aa10.39□□□□□ -0.75
SHH4YLR164W SPT5P27692 1063 aaKnown RBP10.39□□□□□ -0.75
SHH4YLR164W PLC1P32383 869 aa10.39□□□□□ -0.75
SHH4YLR164W MET4P32389 672 aa10.39□□□□□ -0.75
SHH4YLR164W DSS4P32601 143 aa10.39□□□□□ -0.75
SHH4YLR164W DUG2P38149 878 aa10.39□□□□□ -0.75
SHH4YLR164W TAF1P46677 1066 aa10.39□□□□□ -0.75
SHH4YLR164W YNL108CP53929 270 aa10.39□□□□□ -0.75
SHH4YLR164W CEG1Q01159 459 aaPredicted RBP10.39□□□□□ -0.75
SHH4YLR164W FAP7Q12055 197 aaPredicted RBP10.39□□□□□ -0.75
SHH4YLR164W RIO1Q12196 484 aaKnown RBP10.39□□□□□ -0.75
SHH4YLR164W GCR1P07261 785 aa10.38□□□□□ -0.75
SHH4YLR164W PYC1P11154 1178 aaKnown RBP10.38□□□□□ -0.75
SHH4YLR164W CDC24P11433 854 aaPredicted RBP10.38□□□□□ -0.75
SHH4YLR164W PEP5P12868 1029 aa10.38□□□□□ -0.75
SHH4YLR164W UBC6P33296 250 aaPredicted RBP10.38□□□□□ -0.75
SHH4YLR164W HSP78P33416 811 aa10.38□□□□□ -0.75
SHH4YLR164W YCK3P39962 524 aa10.38□□□□□ -0.75
SHH4YLR164W VTC4P47075 721 aa10.38□□□□□ -0.75
SHH4YLR164W GCN5Q03330 439 aa10.38□□□□□ -0.75
SHH4YLR164W ARA2Q04212 335 aa10.38□□□□□ -0.75
SHH4YLR164W SFH1Q06168 426 aa10.38□□□□□ -0.75
SHH4YLR164W CIR2Q08822 631 aa10.38□□□□□ -0.75
SHH4YLR164W RRD2Q12461 358 aa10.38□□□□□ -0.75
SHH4YLR164W TPS2P31688 896 aaKnown RBP10.37□□□□□ -0.75
SHH4YLR164W MUD2P36084 527 aaKnown RBP10.37□□□□□ -0.75
SHH4YLR164W YKR051WP36142 418 aa10.37□□□□□ -0.75
SHH4YLR164W OLA1P38219 394 aaKnown RBP10.37□□□□□ -0.75
SHH4YLR164W SPP381P38282 291 aaPredicted RBP10.37□□□□□ -0.75
SHH4YLR164W YBR225WP38321 900 aa10.37□□□□□ -0.75
SHH4YLR164W MSC7P38694 644 aa10.37□□□□□ -0.75
SHH4YLR164W SAP185P40856 1058 aa10.37□□□□□ -0.75
Retrieved 100 of 5,963 RNA–protein pairs in 55 ms