RNA–Protein interactions for RNA: YLR087C

CSF1, Transcript of Protein required for fermentation at low temperature, yeastyeast

Gene CSF1, Length 8,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSF1YLR087C RAD27P26793 382 aa2.4□□□□□ -2.02
CSF1YLR087C PMC1P38929 1173 aaPredicted RBP2.4□□□□□ -2.02
CSF1YLR087C YIL166CP40445 542 aa2.4□□□□□ -2.02
CSF1YLR087C ARF3P40994 183 aaRIP-Chip data2.4□□□□□ -2.02 RIP-Chip
CSF1YLR087C ADO1P47143 340 aaKnown RBP2.4□□□□□ -2.02
CSF1YLR087C BCP1Q06338 283 aa2.4□□□□□ -2.02
CSF1YLR087C NBP2Q12163 236 aa2.4□□□□□ -2.02
CSF1YLR087C PHO8P11491 566 aa2.4□□□□□ -2.03
CSF1YLR087C BOS1P25385 244 aa2.4□□□□□ -2.03
CSF1YLR087C PEX6P33760 1030 aa2.4□□□□□ -2.03
CSF1YLR087C RDH54P38086 958 aa2.4□□□□□ -2.03
CSF1YLR087C MTG2P38860 518 aa2.4□□□□□ -2.03
CSF1YLR087C ZIM17P42844 174 aa2.4□□□□□ -2.03
CSF1YLR087C YJR107WP47145 328 aa2.4□□□□□ -2.03
CSF1YLR087C CUE3P53137 624 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C MDM1Q01846 1127 aa2.4□□□□□ -2.03
CSF1YLR087C PSK2Q08217 1101 aa2.4□□□□□ -2.03
CSF1YLR087C LAP2Q10740 671 aa2.4□□□□□ -2.03
CSF1YLR087C VPS54Q12071 889 aa2.4□□□□□ -2.03
CSF1YLR087C MAM3Q12296 706 aa2.4□□□□□ -2.03
CSF1YLR087C DFG16Q99234 619 aa2.4□□□□□ -2.03
CSF1YLR087C YBT1P32386 1661 aa2.4□□□□□ -2.03
CSF1YLR087C PGK1P00560 416 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C LAT1P12695 482 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C AMD2P22580 549 aa2.4□□□□□ -2.03
CSF1YLR087C STO1P34160 861 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C DUG2P38149 878 aa2.4□□□□□ -2.03
CSF1YLR087C LYS12P40495 371 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C LYS14P40971 790 aa2.4□□□□□ -2.03
CSF1YLR087C FMS1P50264 508 aa2.4□□□□□ -2.03
CSF1YLR087C CUS2P53830 285 aaPredicted RBP2.4□□□□□ -2.03
CSF1YLR087C MPS1P54199 764 aa2.4□□□□□ -2.03
CSF1YLR087C PLP1Q04004 230 aa2.4□□□□□ -2.03
CSF1YLR087C RSC2Q06488 889 aa2.4□□□□□ -2.03
CSF1YLR087C CUE5Q08412 411 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C PSY3Q12318 242 aa2.4□□□□□ -2.03
CSF1YLR087C NHP6AP11632 93 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C AFT1P22149 690 aa2.4□□□□□ -2.03
CSF1YLR087C SEC14P24280 304 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C RFT1P38206 574 aaPredicted RBP2.4□□□□□ -2.03
CSF1YLR087C END3P39013 349 aa2.4□□□□□ -2.03
CSF1YLR087C NPR2P39923 615 aa2.4□□□□□ -2.03
CSF1YLR087C TOF2Q02208 771 aa2.4□□□□□ -2.03
CSF1YLR087C ACL4Q03771 387 aa2.4□□□□□ -2.03
CSF1YLR087C AIM32Q04689 311 aa2.4□□□□□ -2.03
CSF1YLR087C DNF2Q12675 1612 aa2.4□□□□□ -2.03
CSF1YLR087C YSR3P23501 404 aa2.4□□□□□ -2.03
CSF1YLR087C PRE4P30657 266 aa2.4□□□□□ -2.03
CSF1YLR087C UBP5P39944 805 aa2.4□□□□□ -2.03
CSF1YLR087C YAT2P40017 923 aa2.4□□□□□ -2.03
CSF1YLR087C ATM1P40416 690 aa2.4□□□□□ -2.03
CSF1YLR087C YJL055WP47044 245 aa2.4□□□□□ -2.03
CSF1YLR087C MLC1P53141 149 aa2.4□□□□□ -2.03
CSF1YLR087C REX2P54964 269 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C PEX12Q04370 399 aa2.4□□□□□ -2.03
CSF1YLR087C SPC24Q04477 213 aa2.4□□□□□ -2.03
CSF1YLR087C CHC1P22137 1653 aaKnown RBP2.4□□□□□ -2.03
CSF1YLR087C PUT4P15380 627 aa2.39□□□□□ -2.03
CSF1YLR087C PUF4P25339 888 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
CSF1YLR087C ARO7P32178 256 aa2.39□□□□□ -2.03
CSF1YLR087C NAT2P37293 288 aa2.39□□□□□ -2.03
CSF1YLR087C TEA1P47988 759 aa2.39□□□□□ -2.03
CSF1YLR087C SLD3P53135 668 aa2.39□□□□□ -2.03
CSF1YLR087C APM1Q00776 475 aaPredicted RBP2.39□□□□□ -2.03
CSF1YLR087C RPT6Q01939 405 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C SWA2Q06677 668 aa2.39□□□□□ -2.03
CSF1YLR087C YOR296WQ08748 1289 aa2.39□□□□□ -2.03
CSF1YLR087C AKR2Q12013 749 aa2.39□□□□□ -2.03
CSF1YLR087C EAF3Q12432 401 aa2.39□□□□□ -2.03
CSF1YLR087C RNA15P25299 296 aaPredicted RBP2.39□□□□□ -2.03
CSF1YLR087C SRP72P38688 640 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C YAP1801P38856 637 aa2.39□□□□□ -2.03
CSF1YLR087C DLS1P40366 167 aa2.39□□□□□ -2.03
CSF1YLR087C YGR283CP53336 341 aaPredicted RBP2.39□□□□□ -2.03
CSF1YLR087C PML39Q03760 334 aa2.39□□□□□ -2.03
CSF1YLR087C YMR226CQ05016 267 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C ECM22Q05958 814 aaPredicted RBP2.39□□□□□ -2.03
CSF1YLR087C KAP95Q06142 861 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C CSM4Q08955 156 aa2.39□□□□□ -2.03
CSF1YLR087C YDR061WQ12298 539 aa2.39□□□□□ -2.03
CSF1YLR087C MRP1P10662 321 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C ZWF1P11412 505 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C VMA1P17255 1071 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C RRN10P38204 145 aa2.39□□□□□ -2.03
CSF1YLR087C YHR078WP38799 552 aa2.39□□□□□ -2.03
CSF1YLR087C LSM1P47017 172 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C PIP2P52960 996 aa2.39□□□□□ -2.03
CSF1YLR087C ITC1P53125 1264 aa2.39□□□□□ -2.03
CSF1YLR087C HHO1P53551 258 aa2.39□□□□□ -2.03
CSF1YLR087C ALD6P54115 500 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C ARL3Q02804 198 aa2.39□□□□□ -2.03
CSF1YLR087C RLI1Q03195 608 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C ISR1Q06098 443 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C PCD1Q12524 340 aa2.39□□□□□ -2.03
CSF1YLR087C RXT2P38255 430 aa2.39□□□□□ -2.03
CSF1YLR087C YFR006WP43590 535 aa2.39□□□□□ -2.03
CSF1YLR087C RMD8P43620 662 aa2.39□□□□□ -2.03
CSF1YLR087C BUL1P48524 976 aa2.39□□□□□ -2.03
CSF1YLR087C VMA10P48836 114 aaKnown RBP2.39□□□□□ -2.03
CSF1YLR087C EFR3Q03653 782 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms