RNA–Protein interactions for RNA: YLL049W

LDB18, Transcript of Component of the dynactin complex, yeastyeast

Gene LDB18, Length 540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LDB18YLL049W TY1A-DR1Q03856 440 aa5.64□□□□□ -1.51
LDB18YLL049W SSL1Q04673 461 aaPredicted RBP5.64□□□□□ -1.51
LDB18YLL049W TY1A-ML1Q04706 440 aaKnown RBP5.64□□□□□ -1.51
LDB18YLL049W YLR456WQ06199 204 aa5.64□□□□□ -1.51
LDB18YLL049W RRP15Q06511 250 aaPredicted RBP5.64□□□□□ -1.51
LDB18YLL049W YOR389WQ08912 624 aa5.64□□□□□ -1.51
LDB18YLL049W YPL278CQ08990 100 aa5.64□□□□□ -1.51
LDB18YLL049W TY1A-BRQ12217 440 aa5.64□□□□□ -1.51
LDB18YLL049W LCB4Q12246 624 aa5.64□□□□□ -1.51
LDB18YLL049W TY1A-NL2Q12470 440 aa5.64□□□□□ -1.51
LDB18YLL049W TY1A-GR2Q12485 440 aa5.64□□□□□ -1.51
LDB18YLL049W NBL1Q3E7Y6 73 aa5.64□□□□□ -1.51
LDB18YLL049W SEC2P17065 759 aa5.63□□□□□ -1.51
LDB18YLL049W CRP1P38845 465 aaKnown RBP5.63□□□□□ -1.51
LDB18YLL049W KRI1P42846 591 aaKnown RBP5.63□□□□□ -1.51
LDB18YLL049W DAK2P43550 591 aa5.63□□□□□ -1.51
LDB18YLL049W GUF1P46943 645 aa5.63□□□□□ -1.51
LDB18YLL049W RTC4P53850 401 aa5.63□□□□□ -1.51
LDB18YLL049W MTD1Q02046 320 aaKnown RBP5.63□□□□□ -1.51
LDB18YLL049W PNP1Q05788 311 aa5.63□□□□□ -1.51
LDB18YLL049W SUL2Q12325 893 aa5.63□□□□□ -1.51
LDB18YLL049W RAD3P06839 778 aa5.62□□□□□ -1.51
LDB18YLL049W RPL1AP0CX43 217 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W RPL1BP0CX44 217 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W NAT1P12945 854 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W DAL7P21826 554 aa5.62□□□□□ -1.51
LDB18YLL049W MUD1P32605 298 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W PPS1P38148 807 aa5.62□□□□□ -1.51
LDB18YLL049W YHL017WP38745 532 aa5.62□□□□□ -1.51
LDB18YLL049W SAK1P38990 1142 aa5.62□□□□□ -1.51
LDB18YLL049W FTR1P40088 404 aa5.62□□□□□ -1.51
LDB18YLL049W LTP1P40347 161 aa5.62□□□□□ -1.51
LDB18YLL049W ASG1P40467 964 aa5.62□□□□□ -1.51
LDB18YLL049W PYK2P52489 506 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W SUN4P53616 420 aa5.62□□□□□ -1.51
LDB18YLL049W RTN1Q04947 295 aaKnown RBP5.62□□□□□ -1.51
LDB18YLL049W TSC13Q99190 310 aa5.62□□□□□ -1.51
LDB18YLL049W COX3P00420 269 aa5.61□□□□□ -1.51
LDB18YLL049W PRT1P06103 763 aaKnown RBP5.61□□□□□ -1.51
LDB18YLL049W IME1P21190 360 aa5.61□□□□□ -1.51
LDB18YLL049W ERG6P25087 383 aaKnown RBP5.61□□□□□ -1.51
LDB18YLL049W PYC2P32327 1180 aaKnown RBP5.61□□□□□ -1.51
LDB18YLL049W PIN4P34217 668 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
LDB18YLL049W MRPL40P36534 297 aa5.61□□□□□ -1.51
LDB18YLL049W ECM13P38195 257 aa5.61□□□□□ -1.51
LDB18YLL049W BOL3P39724 118 aa5.61□□□□□ -1.51
LDB18YLL049W KAP123P40069 1113 aaKnown RBP5.61□□□□□ -1.51
LDB18YLL049W LCB2P40970 561 aa5.61□□□□□ -1.51
LDB18YLL049W YFL034WP43564 1073 aa5.61□□□□□ -1.51
LDB18YLL049W COQ5P49017 307 aa5.61□□□□□ -1.51
LDB18YLL049W PEX14P53112 341 aa5.61□□□□□ -1.51
LDB18YLL049W ECM38Q05902 660 aaPredicted RBP5.61□□□□□ -1.51
LDB18YLL049W PUN1Q06991 263 aa5.61□□□□□ -1.51
LDB18YLL049W CLP1Q08685 445 aaPredicted RBP5.61□□□□□ -1.51
LDB18YLL049W SAM4Q08985 325 aaKnown RBP5.61□□□□□ -1.51
LDB18YLL049W NBP2Q12163 236 aa5.61□□□□□ -1.51
LDB18YLL049W GAL10P04397 699 aa5.6□□□□□ -1.51
LDB18YLL049W FUR4P05316 633 aaKnown RBP5.6□□□□□ -1.51
LDB18YLL049W ATE1P16639 503 aa5.6□□□□□ -1.51
LDB18YLL049W RNR1P21524 888 aaKnown RBP5.6□□□□□ -1.51
LDB18YLL049W PMI40P29952 429 aaKnown RBP5.6□□□□□ -1.51
LDB18YLL049W SGE1P33335 543 aa5.6□□□□□ -1.51
LDB18YLL049W MIC60P36112 540 aa5.6□□□□□ -1.51
LDB18YLL049W CDC1P40986 491 aa5.6□□□□□ -1.51
LDB18YLL049W BUD6P41697 788 aa5.6□□□□□ -1.51
LDB18YLL049W UFE1P41834 346 aa5.6□□□□□ -1.51
LDB18YLL049W SBE2P42223 864 aaKnown RBP5.6□□□□□ -1.51
LDB18YLL049W SMC3P47037 1230 aa5.6□□□□□ -1.51
LDB18YLL049W YJR054WP47114 497 aa5.6□□□□□ -1.51
LDB18YLL049W NBP1P52919 319 aaPredicted RBP5.6□□□□□ -1.51
LDB18YLL049W KXD1P53158 218 aa5.6□□□□□ -1.51
LDB18YLL049W YPL062WQ02781 134 aa5.6□□□□□ -1.51
LDB18YLL049W PIR3Q03180 325 aa5.6□□□□□ -1.51
LDB18YLL049W DON1Q05610 365 aa5.6□□□□□ -1.51
LDB18YLL049W WHI5Q12416 295 aa5.6□□□□□ -1.51
LDB18YLL049W GIS3Q12418 502 aa5.6□□□□□ -1.51
LDB18YLL049W VAN1P23642 535 aa5.59□□□□□ -1.51
LDB18YLL049W TRK2P28584 889 aa5.59□□□□□ -1.51
LDB18YLL049W HSP78P33416 811 aa5.59□□□□□ -1.51
LDB18YLL049W GEM1P39722 662 aa5.59□□□□□ -1.51
LDB18YLL049W SNF7P39929 240 aaKnown RBP5.59□□□□□ -1.51
LDB18YLL049W PAC1P39946 494 aaKnown RBP5.59□□□□□ -1.51
LDB18YLL049W SWS2P53937 143 aa5.59□□□□□ -1.51
LDB18YLL049W AQR1P53943 586 aa5.59□□□□□ -1.51
LDB18YLL049W MZM1Q03429 123 aaPredicted RBP5.59□□□□□ -1.51
LDB18YLL049W YMR206WQ03695 313 aa5.59□□□□□ -1.51
LDB18YLL049W YSH1Q06224 779 aaPredicted RBP5.59□□□□□ -1.51
LDB18YLL049W YFT2Q06676 274 aa5.59□□□□□ -1.51
LDB18YLL049W NDD1Q08887 554 aa5.59□□□□□ -1.51
LDB18YLL049W RKM5Q12367 367 aa5.59□□□□□ -1.51
LDB18YLL049W SEC63P14906 663 aa5.58□□□□□ -1.52
LDB18YLL049W ARF2P19146 181 aaKnown RBP5.58□□□□□ -1.52
LDB18YLL049W SAT4P25333 603 aaKnown RBP5.58□□□□□ -1.52
LDB18YLL049W VAC17P25591 423 aa5.58□□□□□ -1.52
LDB18YLL049W TRM82Q03774 444 aa5.58□□□□□ -1.52
LDB18YLL049W HRD3Q05787 833 aa5.58□□□□□ -1.52
LDB18YLL049W RCL1Q08096 367 aaPredicted RBP5.58□□□□□ -1.52
LDB18YLL049W RSB1Q08417 382 aa5.58□□□□□ -1.52
LDB18YLL049W ABP140Q08641 628 aaKnown RBP5.58□□□□□ -1.52
LDB18YLL049W DDC1Q08949 612 aa5.58□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 17.3 ms