RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W FES1P38260 290 aa6.6□□□□□ -1.35
GEF1YJR040W KSP1P38691 1029 aaKnown RBP6.6□□□□□ -1.35
GEF1YJR040W ERP5P38819 212 aa6.6□□□□□ -1.35
GEF1YJR040W PSY2P40164 858 aa6.6□□□□□ -1.35
GEF1YJR040W PRY3P47033 881 aa6.6□□□□□ -1.35
GEF1YJR040W ESF2P53743 316 aaKnown RBP6.6□□□□□ -1.35
GEF1YJR040W LGE1Q02796 332 aaKnown RBP6.6□□□□□ -1.35
GEF1YJR040W SHE9Q04172 456 aa6.6□□□□□ -1.35
GEF1YJR040W IES4Q08561 116 aa6.6□□□□□ -1.35
GEF1YJR040W GPR1Q12361 961 aa6.6□□□□□ -1.35
GEF1YJR040W MAS2P11914 482 aa6.59□□□□□ -1.35
GEF1YJR040W CHS2P14180 963 aa6.59□□□□□ -1.35
GEF1YJR040W PTC3P34221 468 aaKnown RBP6.59□□□□□ -1.35
GEF1YJR040W PIM1P36775 1133 aa6.59□□□□□ -1.35
GEF1YJR040W VHC1P38329 1120 aa6.59□□□□□ -1.35
GEF1YJR040W BRL1P38770 471 aa6.59□□□□□ -1.35
GEF1YJR040W NPP2P39997 493 aa6.59□□□□□ -1.35
GEF1YJR040W CUL3P53202 744 aa6.59□□□□□ -1.35
GEF1YJR040W TAM41P53230 385 aa6.59□□□□□ -1.35
GEF1YJR040W DAK1P54838 584 aaKnown RBP6.59□□□□□ -1.35
GEF1YJR040W SUT2Q12286 268 aa6.59□□□□□ -1.35
GEF1YJR040W MDM20Q12387 796 aaKnown RBP6.59□□□□□ -1.35
GEF1YJR040W TRZ1P36159 838 aaPredicted RBP6.59□□□□□ -1.36
GEF1YJR040W FLR1P38124 548 aa6.59□□□□□ -1.36
GEF1YJR040W NCL1P38205 684 aaKnown RBP6.59□□□□□ -1.36
GEF1YJR040W MSG5P38590 489 aa6.59□□□□□ -1.36
GEF1YJR040W SKP2P42843 763 aa6.59□□□□□ -1.36
GEF1YJR040W YPQ2Q06328 317 aa6.59□□□□□ -1.36
GEF1YJR040W ATG17Q06410 417 aa6.59□□□□□ -1.36
GEF1YJR040W BUD7Q08754 746 aa6.59□□□□□ -1.36
GEF1YJR040W ECM29P38737 1868 aa6.58□□□□□ -1.36
GEF1YJR040W CBF1P17106 351 aa6.58□□□□□ -1.36
GEF1YJR040W THR1P17423 357 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W DBP1P24784 617 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W SKG6P32900 734 aaPredicted RBP6.58□□□□□ -1.36
GEF1YJR040W YBL055CP34220 418 aaPredicted RBP6.58□□□□□ -1.36
GEF1YJR040W PEX18P38855 283 aa6.58□□□□□ -1.36
GEF1YJR040W END3P39013 349 aa6.58□□□□□ -1.36
GEF1YJR040W ALG5P40350 334 aa6.58□□□□□ -1.36
GEF1YJR040W LCB2P40970 561 aa6.58□□□□□ -1.36
GEF1YJR040W STB2P46679 850 aa6.58□□□□□ -1.36
GEF1YJR040W HOP2P53187 214 aa6.58□□□□□ -1.36
GEF1YJR040W TIM8P57744 87 aa6.58□□□□□ -1.36
GEF1YJR040W RPM2Q02773 1202 aa6.58□□□□□ -1.36
GEF1YJR040W YDR179W-AQ03983 463 aa6.58□□□□□ -1.36
GEF1YJR040W RRP9Q06506 573 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W VIK1Q12045 647 aa6.58□□□□□ -1.36
GEF1YJR040W RUP1Q12242 671 aa6.58□□□□□ -1.36
GEF1YJR040W YOR131CQ12486 218 aa6.58□□□□□ -1.36
GEF1YJR040W YPR089WO13585 888 aa6.58□□□□□ -1.36
GEF1YJR040W SSD1P24276 1250 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
GEF1YJR040W PUF4P25339 888 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
GEF1YJR040W MSS51P32335 436 aa6.58□□□□□ -1.36
GEF1YJR040W BCS1P32839 456 aa6.58□□□□□ -1.36
GEF1YJR040W AST1P35183 429 aa6.58□□□□□ -1.36
GEF1YJR040W STN1P38960 494 aa6.58□□□□□ -1.36
GEF1YJR040W SPC72P39723 622 aa6.58□□□□□ -1.36
GEF1YJR040W SIP5P40210 489 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W RRD1P40454 393 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W EMW1P42842 904 aaKnown RBP6.58□□□□□ -1.36
GEF1YJR040W SCS3P53012 380 aa6.58□□□□□ -1.36
GEF1YJR040W YNL146WP53906 100 aa6.58□□□□□ -1.36
GEF1YJR040W MTG1Q03151 367 aaPredicted RBP6.58□□□□□ -1.36
GEF1YJR040W GTB1Q04924 702 aa6.58□□□□□ -1.36
GEF1YJR040W ATG26Q06321 1198 aa6.58□□□□□ -1.36
GEF1YJR040W HEM1P09950 548 aaPredicted RBP6.57□□□□□ -1.36
GEF1YJR040W MSB1P21339 1137 aaKnown RBP6.57□□□□□ -1.36
GEF1YJR040W PAH1P32567 862 aa6.57□□□□□ -1.36
GEF1YJR040W TMT1P32643 299 aa6.57□□□□□ -1.36
GEF1YJR040W PEX2P32800 271 aa6.57□□□□□ -1.36
GEF1YJR040W YEL023CP39992 682 aa6.57□□□□□ -1.36
GEF1YJR040W IRR1P40541 1150 aa6.57□□□□□ -1.36
GEF1YJR040W ESBP6P53918 673 aa6.57□□□□□ -1.36
GEF1YJR040W NOP15P53927 220 aaPredicted RBP6.57□□□□□ -1.36
GEF1YJR040W ULP1Q02724 621 aa6.57□□□□□ -1.36
GEF1YJR040W YML108WQ03759 105 aa6.57□□□□□ -1.36
GEF1YJR040W ATG11Q12527 1178 aa6.57□□□□□ -1.36
GEF1YJR040W SEM1O94742 89 aa6.56□□□□□ -1.36
GEF1YJR040W CDC33P07260 213 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W YAK1P14680 807 aa6.56□□□□□ -1.36
GEF1YJR040W DBF4P32325 704 aa6.56□□□□□ -1.36
GEF1YJR040W MUD1P32605 298 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W RAD54P32863 898 aa6.56□□□□□ -1.36
GEF1YJR040W JEM1P40358 645 aa6.56□□□□□ -1.36
GEF1YJR040W AVT1P47082 602 aa6.56□□□□□ -1.36
GEF1YJR040W CIK1Q01649 594 aa6.56□□□□□ -1.36
GEF1YJR040W SHR3Q02774 210 aa6.56□□□□□ -1.36
GEF1YJR040W WHI5Q12416 295 aa6.56□□□□□ -1.36
GEF1YJR040W HTZ1Q12692 134 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W CMD1P06787 147 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W PEP5P12868 1029 aa6.56□□□□□ -1.36
GEF1YJR040W CAP1P28495 268 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W UTP11P34247 250 aaPredicted RBP6.56□□□□□ -1.36
GEF1YJR040W VMA22P38784 181 aa6.56□□□□□ -1.36
GEF1YJR040W FTR1P40088 404 aa6.56□□□□□ -1.36
GEF1YJR040W SCD6P45978 349 aaKnown RBP RIP-Chip data6.56□□□□□ -1.36 RIP-Chip
GEF1YJR040W NOP9P47077 666 aaKnown RBP6.56□□□□□ -1.36
GEF1YJR040W ISM1P48526 1002 aa6.56□□□□□ -1.36
GEF1YJR040W VPS62P53285 467 aa6.56□□□□□ -1.36
GEF1YJR040W BRE5P53741 515 aaKnown RBP6.56□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 46.6 ms