RNA–Protein interactions for RNA: YIL104C

SHQ1, Transcript of Chaperone protein, yeastyeast

Gene SHQ1, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHQ1YIL104C YNL018CP53976 612 aa3.63□□□□□ -1.83
SHQ1YIL104C SLG1P54867 378 aa3.63□□□□□ -1.83
SHQ1YIL104C CSR1Q06705 408 aaKnown RBP3.63□□□□□ -1.83
SHQ1YIL104C SIL1Q08199 421 aa3.63□□□□□ -1.83
SHQ1YIL104C APL4Q12028 832 aa3.63□□□□□ -1.83
SHQ1YIL104C SGT2Q12118 346 aaKnown RBP3.63□□□□□ -1.83
SHQ1YIL104C SSB1P11484 613 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C MSD1P15179 658 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C SPO12P17123 173 aa3.62□□□□□ -1.83
SHQ1YIL104C RNR1P21524 888 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C DAL2P25335 343 aa3.62□□□□□ -1.83
SHQ1YIL104C APL1P27351 700 aa3.62□□□□□ -1.83
SHQ1YIL104C SLA2P33338 968 aa3.62□□□□□ -1.83
SHQ1YIL104C HEL1P36113 551 aa3.62□□□□□ -1.83
SHQ1YIL104C TRZ1P36159 838 aaPredicted RBP3.62□□□□□ -1.83
SHQ1YIL104C SSB2P40150 613 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C ESL1P40456 1118 aa3.62□□□□□ -1.83
SHQ1YIL104C YIR016WP40572 265 aa3.62□□□□□ -1.83
SHQ1YIL104C MAF1P41910 395 aa3.62□□□□□ -1.83
SHQ1YIL104C SCD6P45978 349 aaKnown RBP RIP-Chip data3.62□□□□□ -1.83not detected
SHQ1YIL104C STP1Q00947 519 aa3.62□□□□□ -1.83
SHQ1YIL104C LCD1Q04377 747 aa3.62□□□□□ -1.83
SHQ1YIL104C GFD1Q04839 188 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C YDR278CQ05612 105 aa3.62□□□□□ -1.83
SHQ1YIL104C IWR1Q07532 353 aaPredicted RBP3.62□□□□□ -1.83
SHQ1YIL104C YOR059CQ08448 450 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C ABP140Q08641 628 aaKnown RBP3.62□□□□□ -1.83
SHQ1YIL104C YPR027CQ12079 277 aa3.62□□□□□ -1.83
SHQ1YIL104C OSH2Q12451 1283 aa3.62□□□□□ -1.83
SHQ1YIL104C TRP2P00899 507 aaKnown RBP3.61□□□□□ -1.83
SHQ1YIL104C EST1P17214 699 aaPredicted RBP3.61□□□□□ -1.83
SHQ1YIL104C MSH3P25336 1018 aa3.61□□□□□ -1.83
SHQ1YIL104C KIP1P28742 1111 aa3.61□□□□□ -1.83
SHQ1YIL104C SWI3P32591 825 aa3.61□□□□□ -1.83
SHQ1YIL104C SKG6P32900 734 aaPredicted RBP3.61□□□□□ -1.83
SHQ1YIL104C BUD2P33314 1104 aa3.61□□□□□ -1.83
SHQ1YIL104C CSG2P35206 410 aa3.61□□□□□ -1.83
SHQ1YIL104C MRPL7P36519 292 aa3.61□□□□□ -1.83
SHQ1YIL104C MRPL10P36520 322 aa3.61□□□□□ -1.83
SHQ1YIL104C YHL008CP38750 627 aa3.61□□□□□ -1.83
SHQ1YIL104C YHR131CP38835 850 aa3.61□□□□□ -1.83
SHQ1YIL104C YHR202WP38887 602 aa3.61□□□□□ -1.83
SHQ1YIL104C SPT8P38915 602 aa3.61□□□□□ -1.83
SHQ1YIL104C BUD16P39988 312 aa3.61□□□□□ -1.83
SHQ1YIL104C VFA1P40080 203 aa3.61□□□□□ -1.83
SHQ1YIL104C HXT8P40886 569 aa3.61□□□□□ -1.83
SHQ1YIL104C ALT1P52893 592 aa3.61□□□□□ -1.83
SHQ1YIL104C EAF7P53911 425 aaKnown RBP3.61□□□□□ -1.83
SHQ1YIL104C YNL011CP53980 444 aa3.61□□□□□ -1.83
SHQ1YIL104C RPA49Q01080 415 aaPredicted RBP3.61□□□□□ -1.83
SHQ1YIL104C UME1Q03010 460 aa3.61□□□□□ -1.83
SHQ1YIL104C EAR1Q03212 550 aa3.61□□□□□ -1.83
SHQ1YIL104C RCR2Q03446 210 aaKnown RBP3.61□□□□□ -1.83
SHQ1YIL104C SKY1Q03656 742 aa3.61□□□□□ -1.83
SHQ1YIL104C HCR1Q05775 265 aaKnown RBP3.61□□□□□ -1.83
SHQ1YIL104C ECM3Q99252 613 aa3.61□□□□□ -1.83
SHQ1YIL104C AI5_BETAQ9ZZX0 354 aa3.61□□□□□ -1.83
SHQ1YIL104C FKS1P38631 1876 aaKnown RBP3.6□□□□□ -1.83
SHQ1YIL104C BI2P03873 423 aa3.6□□□□□ -1.83
SHQ1YIL104C BI4P03879 638 aa3.6□□□□□ -1.83
SHQ1YIL104C HAP2P06774 265 aa3.6□□□□□ -1.83
SHQ1YIL104C NAT1P12945 854 aaKnown RBP3.6□□□□□ -1.83
SHQ1YIL104C SEC21P32074 935 aaKnown RBP3.6□□□□□ -1.83
SHQ1YIL104C TRM2P33753 639 aa3.6□□□□□ -1.83
SHQ1YIL104C CCL1P37366 393 aa3.6□□□□□ -1.83
SHQ1YIL104C HMT1P38074 348 aa3.6□□□□□ -1.83
SHQ1YIL104C YBR056WP38081 501 aa3.6□□□□□ -1.83
SHQ1YIL104C PCH2P38126 564 aa3.6□□□□□ -1.83
SHQ1YIL104C APN2P38207 520 aa3.6□□□□□ -1.83
SHQ1YIL104C SET5P38890 526 aaKnown RBP3.6□□□□□ -1.83
SHQ1YIL104C GIP4P39732 760 aa3.6□□□□□ -1.83
SHQ1YIL104C DSE1P40077 573 aa3.6□□□□□ -1.83
SHQ1YIL104C FTR1P40088 404 aa3.6□□□□□ -1.83
SHQ1YIL104C SDS3P40505 327 aa3.6□□□□□ -1.83
SHQ1YIL104C PHO86P46956 311 aa3.6□□□□□ -1.83
SHQ1YIL104C YJR124CP47159 448 aa3.6□□□□□ -1.83
SHQ1YIL104C MET13P53128 600 aa3.6□□□□□ -1.83
SHQ1YIL104C SPC98P53540 846 aa3.6□□□□□ -1.83
SHQ1YIL104C CEF1Q03654 590 aaPredicted RBP3.6□□□□□ -1.83
SHQ1YIL104C GIR2Q03768 265 aaPredicted RBP3.6□□□□□ -1.83
SHQ1YIL104C MRN1Q08925 612 aaKnown RBP RIP-Chip data3.6□□□□□ -1.83not detected
SHQ1YIL104C YOR223WQ12015 292 aa3.6□□□□□ -1.83
SHQ1YIL104C PLP2Q12017 286 aa3.6□□□□□ -1.83
SHQ1YIL104C YOL098CQ12496 1037 aa3.6□□□□□ -1.83
SHQ1YIL104C BI3Q9ZZW7 517 aa3.6□□□□□ -1.83
SHQ1YIL104C GAL10P04397 699 aa3.6□□□□□ -1.83
SHQ1YIL104C COX11P19516 300 aaKnown RBP3.6□□□□□ -1.83
SHQ1YIL104C PEX1P24004 1043 aa3.6□□□□□ -1.83
SHQ1YIL104C FRE1P32791 686 aa3.6□□□□□ -1.83
SHQ1YIL104C SMC1P32908 1225 aa3.6□□□□□ -1.83
SHQ1YIL104C XRS2P33301 854 aa3.6□□□□□ -1.83
SHQ1YIL104C HSP78P33416 811 aa3.6□□□□□ -1.83
SHQ1YIL104C ABZ1P37254 787 aaPredicted RBP3.6□□□□□ -1.83
SHQ1YIL104C EXO5P38289 585 aa3.6□□□□□ -1.83
SHQ1YIL104C YEL075CP39972 122 aa3.6□□□□□ -1.83
SHQ1YIL104C IES1P43579 692 aa3.6□□□□□ -1.83
SHQ1YIL104C NUT1P53114 1132 aa3.6□□□□□ -1.83
SHQ1YIL104C YGL036WP53185 909 aaPredicted RBP3.6□□□□□ -1.83
SHQ1YIL104C YNR065CP53751 1116 aa3.6□□□□□ -1.83
SHQ1YIL104C VPS75P53853 264 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 19.2 ms