RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C SAP4P53036 818 aa1.52□□□□□ -2.17
SWI4YER111C ACS1Q01574 713 aa1.52□□□□□ -2.17
SWI4YER111C CTK1Q03957 528 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C TSR2Q06672 205 aaKnown RBP1.52□□□□□ -2.17
SWI4YER111C CDC26P14724 124 aa1.51□□□□□ -2.17
SWI4YER111C PRP22P24384 1145 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C SWI4P25302 1093 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C GCD7P32502 381 aaPredicted RBP1.51□□□□□ -2.17
SWI4YER111C CNS1P33313 385 aa1.51□□□□□ -2.17
SWI4YER111C RMA1P36001 430 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C OMA1P36163 345 aa1.51□□□□□ -2.17
SWI4YER111C RRP8P38961 392 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C CCT3P39077 534 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C PLB1P39105 664 aa1.51□□□□□ -2.17
SWI4YER111C KAP123P40069 1113 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C YRB30P53107 440 aaPredicted RBP1.51□□□□□ -2.17
SWI4YER111C ATG21Q02887 496 aa1.51□□□□□ -2.17
SWI4YER111C ARA2Q04212 335 aa1.51□□□□□ -2.17
SWI4YER111C HLR1Q04429 423 aa1.51□□□□□ -2.17
SWI4YER111C ACK1Q07622 623 aaPredicted RBP1.51□□□□□ -2.17
SWI4YER111C ADY3Q07732 790 aa1.51□□□□□ -2.17
SWI4YER111C YDR056CQ12025 205 aa1.51□□□□□ -2.17
SWI4YER111C TGL5Q12043 749 aa1.51□□□□□ -2.17
SWI4YER111C YOL087CQ99247 1116 aa1.51□□□□□ -2.17
SWI4YER111C YRF1-1P0CX20 1796 aa1.51□□□□□ -2.17
SWI4YER111C YRF1-5P0CX21 1796 aa1.51□□□□□ -2.17
SWI4YER111C YRF1-8P0CX22 1796 aa1.51□□□□□ -2.17
SWI4YER111C PRP4P20053 465 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C MCM3P24279 971 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C ERG6P25087 383 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C KIN82P25341 720 aa1.51□□□□□ -2.17
SWI4YER111C MVD1P32377 396 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C TEF4P36008 412 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C RRN3P36070 627 aa1.51□□□□□ -2.17
SWI4YER111C SHM2P37291 469 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C UBS1P38290 277 aa1.51□□□□□ -2.17
SWI4YER111C YHR112CP38716 378 aa1.51□□□□□ -2.17
SWI4YER111C SFB3P38810 929 aa1.51□□□□□ -2.17
SWI4YER111C NDE1P40215 560 aa1.51□□□□□ -2.17
SWI4YER111C RPT2P40327 437 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C RAD26P40352 1085 aa1.51□□□□□ -2.17
SWI4YER111C YIL077CP40508 320 aa1.51□□□□□ -2.17
SWI4YER111C IRC5P43610 853 aa1.51□□□□□ -2.17
SWI4YER111C MET12P46151 657 aa1.51□□□□□ -2.17
SWI4YER111C TAH11P47112 604 aa1.51□□□□□ -2.17
SWI4YER111C CBK1P53894 756 aa1.51□□□□□ -2.17
SWI4YER111C ARG5,6Q01217 863 aa1.51□□□□□ -2.17
SWI4YER111C TRS130Q03660 1102 aa1.51□□□□□ -2.17
SWI4YER111C YAP6Q03935 383 aa1.51□□□□□ -2.17
SWI4YER111C RTK1Q12100 620 aaPredicted RBP1.51□□□□□ -2.17
SWI4YER111C DBP10Q12389 995 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C NPC2Q12408 173 aa1.51□□□□□ -2.17
SWI4YER111C TPK1P06244 397 aa1.51□□□□□ -2.17
SWI4YER111C FBP1P09201 348 aa1.51□□□□□ -2.17
SWI4YER111C RNR1P21524 888 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C RIT1P23796 513 aa1.51□□□□□ -2.17
SWI4YER111C RPS7AP26786 190 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C PGM1P33401 570 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C APL2P36000 726 aaPredicted RBP1.51□□□□□ -2.17
SWI4YER111C YKR073CP36153 106 aa1.51□□□□□ -2.17
SWI4YER111C COS111P38308 924 aa1.51□□□□□ -2.17
SWI4YER111C SPC72P39723 622 aa1.51□□□□□ -2.17
SWI4YER111C CAB2P40506 365 aa1.51□□□□□ -2.17
SWI4YER111C BUD8P41698 603 aa1.51□□□□□ -2.17
SWI4YER111C IES1P43579 692 aa1.51□□□□□ -2.17
SWI4YER111C MEP3P53390 489 aa1.51□□□□□ -2.17
SWI4YER111C SPO1P53541 631 aa1.51□□□□□ -2.17
SWI4YER111C MRPL22P53881 309 aa1.51□□□□□ -2.17
SWI4YER111C YLR224WQ05947 369 aa1.51□□□□□ -2.17
SWI4YER111C OPY2Q06810 360 aa1.51□□□□□ -2.17
SWI4YER111C BRE1Q07457 700 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C COX17Q12287 69 aa1.51□□□□□ -2.17
SWI4YER111C VPS5Q92331 675 aa1.51□□□□□ -2.17
SWI4YER111C CHC1P22137 1653 aaKnown RBP1.51□□□□□ -2.17
SWI4YER111C URA3P03962 267 aa1.5□□□□□ -2.17
SWI4YER111C HMG2P12684 1045 aa1.5□□□□□ -2.17
SWI4YER111C STE14P32584 239 aa1.5□□□□□ -2.17
SWI4YER111C STB5P38699 743 aa1.5□□□□□ -2.17
SWI4YER111C TMN3P40071 706 aa1.5□□□□□ -2.17
SWI4YER111C VFA1P40080 203 aa1.5□□□□□ -2.17
SWI4YER111C IMA5P40884 581 aa1.5□□□□□ -2.17
SWI4YER111C TEX1P53851 422 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C GCN5Q03330 439 aa1.5□□□□□ -2.17
SWI4YER111C RCR2Q03446 210 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C MCM21Q06675 368 aa1.5□□□□□ -2.17
SWI4YER111C YCG1Q06680 1035 aa1.5□□□□□ -2.17
SWI4YER111C BRE4Q07660 1125 aa1.5□□□□□ -2.17
SWI4YER111C YDL177CQ12257 170 aa1.5□□□□□ -2.17
SWI4YER111C ADE3P07245 946 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C MET3P08536 511 aa1.5□□□□□ -2.17
SWI4YER111C GFA1P14742 717 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C MAC1P35192 417 aa1.5□□□□□ -2.17
SWI4YER111C MUD2P36084 527 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C LNP1P38878 278 aa1.5□□□□□ -2.17
SWI4YER111C SKN7P38889 622 aa1.5□□□□□ -2.17
SWI4YER111C STT3P39007 718 aaKnown RBP1.5□□□□□ -2.17
SWI4YER111C PUG1P40100 303 aa1.5□□□□□ -2.17
SWI4YER111C PRM2P40534 656 aa1.5□□□□□ -2.17
SWI4YER111C IDS2P46958 469 aa1.5□□□□□ -2.17
SWI4YER111C ZAP1P47043 880 aa1.5□□□□□ -2.17
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms