RNA–Protein interactions for RNA: YER100W

UBC6, Transcript of Ubiquitin-conjugating enzyme involved in ERAD, yeastyeast

Gene UBC6, Length 753 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC6YER100W BIT61P47041 543 aa5.66□□□□□ -1.5
UBC6YER100W NCS6P53088 359 aa5.66□□□□□ -1.5
UBC6YER100W SPO1P53541 631 aa5.66□□□□□ -1.5
UBC6YER100W PKH1Q03407 766 aa5.66□□□□□ -1.5
UBC6YER100W VBA4Q04602 768 aaKnown RBP5.66□□□□□ -1.5
UBC6YER100W HOS1Q12214 470 aa5.66□□□□□ -1.5
UBC6YER100W SCM3Q12334 223 aa5.66□□□□□ -1.5
UBC6YER100W ENT1Q12518 454 aa5.66□□□□□ -1.5
UBC6YER100W URA3P03962 267 aa5.65□□□□□ -1.5
UBC6YER100W FUM1P08417 488 aaKnown RBP5.65□□□□□ -1.5
UBC6YER100W GCD1P09032 578 aaPredicted RBP5.65□□□□□ -1.5
UBC6YER100W HMG2P12684 1045 aa5.65□□□□□ -1.5
UBC6YER100W YCK2P23292 546 aaKnown RBP5.65□□□□□ -1.5
UBC6YER100W SEC21P32074 935 aaKnown RBP5.65□□□□□ -1.5
UBC6YER100W IFA38P38286 347 aa5.65□□□□□ -1.5
UBC6YER100W FSH1P38777 243 aaKnown RBP5.65□□□□□ -1.5
UBC6YER100W UME6P39001 836 aa5.65□□□□□ -1.5
UBC6YER100W VTC2P43585 828 aa5.65□□□□□ -1.5
UBC6YER100W RRT6P53117 311 aaPredicted RBP5.65□□□□□ -1.5
UBC6YER100W SQS1P53866 767 aaKnown RBP5.65□□□□□ -1.5
UBC6YER100W SGO1Q08490 590 aa5.65□□□□□ -1.5
UBC6YER100W THI72Q08579 599 aa5.65□□□□□ -1.5
UBC6YER100W TRM8Q12009 286 aa5.65□□□□□ -1.5
UBC6YER100W ATG11Q12527 1178 aa5.65□□□□□ -1.5
UBC6YER100W GUK1P15454 187 aaKnown RBP5.64□□□□□ -1.51
UBC6YER100W AAC3P18238 307 aa5.64□□□□□ -1.51
UBC6YER100W CMK1P27466 446 aaKnown RBP5.64□□□□□ -1.51
UBC6YER100W NUP120P35729 1037 aa5.64□□□□□ -1.51
UBC6YER100W RMA1P36001 430 aaKnown RBP5.64□□□□□ -1.51
UBC6YER100W TAT1P38085 619 aa5.64□□□□□ -1.51
UBC6YER100W YHR112CP38716 378 aa5.64□□□□□ -1.51
UBC6YER100W BST1P43571 1029 aa5.64□□□□□ -1.51
UBC6YER100W CCT8P47079 568 aaKnown RBP5.64□□□□□ -1.51
UBC6YER100W TAH11P47112 604 aa5.64□□□□□ -1.51
UBC6YER100W CBK1P53894 756 aa5.64□□□□□ -1.51
UBC6YER100W ARA2Q04212 335 aa5.64□□□□□ -1.51
UBC6YER100W VIP1Q06685 1146 aaKnown RBP5.64□□□□□ -1.51
UBC6YER100W VPS36Q06696 566 aa5.64□□□□□ -1.51
UBC6YER100W CDC16P09798 840 aa5.63□□□□□ -1.51
UBC6YER100W BET2P20133 325 aa5.63□□□□□ -1.51
UBC6YER100W KIN82P25341 720 aa5.63□□□□□ -1.51
UBC6YER100W NPL6P32832 435 aa5.63□□□□□ -1.51
UBC6YER100W KAE1P36132 386 aa5.63□□□□□ -1.51
UBC6YER100W SLN1P39928 1220 aaPredicted RBP5.63□□□□□ -1.51
UBC6YER100W GSM1P42950 618 aa5.63□□□□□ -1.51
UBC6YER100W IRC6P43615 237 aa5.63□□□□□ -1.51
UBC6YER100W TIM50Q02776 476 aa5.63□□□□□ -1.51
UBC6YER100W YMR187CQ03236 431 aa5.63□□□□□ -1.51
UBC6YER100W YKU80Q04437 629 aa5.63□□□□□ -1.51
UBC6YER100W HMI1Q12039 706 aa5.63□□□□□ -1.51
UBC6YER100W RNR1P21524 888 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W ARG1P22768 420 aa5.62□□□□□ -1.51
UBC6YER100W RIT1P23796 513 aa5.62□□□□□ -1.51
UBC6YER100W TEF4P36008 412 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W NOP4P37838 685 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W CDS1P38221 457 aa5.62□□□□□ -1.51
UBC6YER100W MSS4P38994 779 aa5.62□□□□□ -1.51
UBC6YER100W NOP9P47077 666 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W TEL2P53038 688 aa5.62□□□□□ -1.51
UBC6YER100W VPS62P53285 467 aa5.62□□□□□ -1.51
UBC6YER100W RBG2P53295 368 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W YAP1802P53309 568 aa5.62□□□□□ -1.51
UBC6YER100W YPL034WQ03083 165 aa5.62□□□□□ -1.51
UBC6YER100W TDA9Q04545 1251 aa5.62□□□□□ -1.51
UBC6YER100W SNU66Q12420 587 aaPredicted RBP5.62□□□□□ -1.51
UBC6YER100W POM34Q12445 299 aa5.62□□□□□ -1.51
UBC6YER100W TRM11Q12463 433 aa5.62□□□□□ -1.51
UBC6YER100W RVB2Q12464 471 aaKnown RBP5.62□□□□□ -1.51
UBC6YER100W ADE3P07245 946 aaKnown RBP5.61□□□□□ -1.51
UBC6YER100W CDC6P09119 513 aa5.61□□□□□ -1.51
UBC6YER100W PCK1P10963 549 aa5.61□□□□□ -1.51
UBC6YER100W PFK2P16862 959 aaKnown RBP RIP-Chip data5.61□□□□□ -1.51not detected
UBC6YER100W RAD16P31244 790 aa5.61□□□□□ -1.51
UBC6YER100W YEL068CP39977 110 aa5.61□□□□□ -1.51
UBC6YER100W CAB2P40506 365 aa5.61□□□□□ -1.51
UBC6YER100W POL31P46957 487 aa5.61□□□□□ -1.51
UBC6YER100W YDL183CP48569 320 aa5.61□□□□□ -1.51
UBC6YER100W PSP1P50896 841 aaKnown RBP5.61□□□□□ -1.51
UBC6YER100W MDR1P53258 950 aa5.61□□□□□ -1.51
UBC6YER100W TEX1P53851 422 aaKnown RBP5.61□□□□□ -1.51
UBC6YER100W NSG2P53898 299 aa5.61□□□□□ -1.51
UBC6YER100W SLU7Q02775 382 aaKnown RBP5.61□□□□□ -1.51
UBC6YER100W PLB2Q03674 706 aa5.61□□□□□ -1.51
UBC6YER100W ADY4Q05955 493 aa5.61□□□□□ -1.51
UBC6YER100W NOP12Q08208 459 aaKnown RBP5.61□□□□□ -1.51
UBC6YER100W MET8P15807 274 aa5.6□□□□□ -1.51
UBC6YER100W SWI4P25302 1093 aaKnown RBP5.6□□□□□ -1.51
UBC6YER100W TFC3P34111 1160 aa5.6□□□□□ -1.51
UBC6YER100W YKL050CP35736 922 aa5.6□□□□□ -1.51
UBC6YER100W SET3P36124 751 aa5.6□□□□□ -1.51
UBC6YER100W SKN7P38889 622 aa5.6□□□□□ -1.51
UBC6YER100W YNL195CP40168 261 aa5.6□□□□□ -1.51
UBC6YER100W ACS1Q01574 713 aa5.6□□□□□ -1.51
UBC6YER100W FDC1Q03034 503 aa5.6□□□□□ -1.51
UBC6YER100W NRG1Q03125 231 aa5.6□□□□□ -1.51
UBC6YER100W GAD1Q04792 585 aa5.6□□□□□ -1.51
UBC6YER100W SPN1Q06505 410 aaPredicted RBP5.6□□□□□ -1.51
UBC6YER100W YCG1Q06680 1035 aa5.6□□□□□ -1.51
UBC6YER100W PEX19Q07418 342 aa5.6□□□□□ -1.51
UBC6YER100W DIA2Q08496 732 aaPredicted RBP5.6□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 18.8 ms