RNA–Protein interactions for RNA: YDR406W

PDR15, Transcript of Plasma membrane ATP binding cassette (ABC) transporter, yeast

Gene PDR15, Length 4,590 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDR15	YDR406W	RGT1	P32862	1170 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	MUD2	P36084	527 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	ERC1	P38767	581 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	YFR018C	P43599	363 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	FRA1	Q07825	749 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	PGC1	Q08959	321 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	TGL5	Q12043	749 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	YER152C	P10356	443 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	TUP1	P16649	713 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	GUT1	P32190	709 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	LAS1	P36146	502 aa	Predicted RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	PGM2	P37012	569 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	STN1	P38960	494 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	YJL132W	P47014	750 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	YJR079W	P47126	109 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	RSC2	Q06488	889 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	WHI4	Q07655	649 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	FMP25	Q08023	583 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	CIR2	Q08822	631 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	UIP5	P36137	443 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	VID24	P38263	362 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	RCK2	P38623	610 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	CCC2	P38995	1004 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	NOP16	P40007	231 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	TAM41	P53230	385 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	YML131W	Q03102	365 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	RKM2	Q03942	479 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	TMA46	Q12000	345 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	SKS1	Q12505	502 aa		4.8	□□□□□ -1.64
PDR15	YDR406W	EFG1	Q3E705	233 aa	Known RBP	4.8	□□□□□ -1.64
PDR15	YDR406W	HEM1	P09950	548 aa	Predicted RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	PIM1	P36775	1133 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	YIL166C	P40445	542 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	IRC6	P43615	237 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	CLA4	P48562	842 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	PUS4	P48567	403 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	ARP9	Q05123	467 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	DBP9	Q06218	594 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	SGT2	Q12118	346 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	MDM12	Q92328	271 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	CCT2	P39076	527 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	MEP1	P40260	492 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	LCB2	P40970	561 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	CCT7	P42943	550 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	RSC8	P43609	557 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	ISM1	P48526	1002 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	VMA10	P48836	114 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	ARK1	P53974	638 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	TIF35	Q04067	274 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	NOP12	Q08208	459 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	NCR1	Q12200	1170 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	DED1	P06634	604 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	SPB1	P25582	841 aa	Predicted RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	ECM32	P32644	1121 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	MRP8	P35719	219 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	CBR1	P38626	284 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	ETP1	P38748	585 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	UBP5	P39944	805 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	MXR1	P40029	184 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	BRO1	P48582	844 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	TOM22	P49334	152 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	ELA1	P53861	379 aa	Predicted RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	NIS1	P53939	407 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	FDC1	Q03034	503 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	NHP10	Q03435	203 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	YLR455W	Q06188	304 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	ERP3	Q12403	225 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	AGP1	P25376	633 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	BCH2	P36122	765 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	NCL1	P38205	684 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	MMS4	P38257	691 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	POP4	P38336	279 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	HXT5	P38695	592 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	PNT1	P38969	423 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	GPP1	P41277	250 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	LEM3	P42838	414 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	EMW1	P42842	904 aa	Known RBP	4.79	□□□□□ -1.64
PDR15	YDR406W	SPO74	P45819	413 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	IES4	Q08561	116 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	YRR1	Q12172	810 aa		4.79	□□□□□ -1.64
PDR15	YDR406W	DAL2	P25335	343 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	YBL055C	P34220	418 aa	Predicted RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	MSC7	P38694	644 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	YHR131C	P38835	850 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	TRS85	P46944	698 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	CPR7	P47103	393 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	UTP8	P53276	713 aa	Known RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	GYL1	Q04322	720 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	YDL206W	Q12424	762 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	CMR1	Q12510	522 aa	Known RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	TMA17	Q12513	150 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	MOT2	P34909	587 aa	Known RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	RIM4	P38741	713 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	GCN20	P43535	752 aa	Known RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	ASN1	P49089	572 aa	Known RBP	4.78	□□□□□ -1.64
PDR15	YDR406W	ROM1	P53046	1155 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	IVY1	Q04934	453 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	DUS4	Q06063	367 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	ESC8	Q08119	714 aa		4.78	□□□□□ -1.64
PDR15	YDR406W	ABP140	Q08641	628 aa	Known RBP	4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms