RNA–Protein interactions for RNA: YDR062W

LCB2, Transcript of Component of serine palmitoyltransferase, yeast

Gene LCB2, Length 1,686 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LCB2	YDR062W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
LCB2	YDR062W	ANP1	P32629	500 aa		5.74	□□□□□ -1.49
LCB2	YDR062W	NPL6	P32832	435 aa		5.74	□□□□□ -1.49
LCB2	YDR062W	SRP72	P38688	640 aa	Known RBP	5.74	□□□□□ -1.49
LCB2	YDR062W	SET2	P46995	733 aa	Known RBP	5.74	□□□□□ -1.49
LCB2	YDR062W	YML6	P51998	286 aa		5.74	□□□□□ -1.49
LCB2	YDR062W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	5.74	□□□□□ -1.49	not detected
LCB2	YDR062W	IRC3	Q06683	689 aa		5.74	□□□□□ -1.49
LCB2	YDR062W	PUS1	Q12211	544 aa	Known RBP	5.74	□□□□□ -1.49
LCB2	YDR062W	SPT7	P35177	1332 aa		5.74	□□□□□ -1.49
LCB2	YDR062W	BET2	P20133	325 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	LRG1	P35688	1017 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	SET3	P36124	751 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	LYS14	P40971	790 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	SSL1	Q04673	461 aa	Predicted RBP	5.73	□□□□□ -1.49
LCB2	YDR062W	SNO4	Q04902	237 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	TRI1	Q05024	226 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	PSR1	Q07800	427 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	HSP33	Q08914	237 aa	Known RBP	5.73	□□□□□ -1.49
LCB2	YDR062W	HSP32	Q08992	237 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	DIN7	Q12086	430 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	SMC4	Q12267	1418 aa		5.73	□□□□□ -1.49
LCB2	YDR062W	CMP2	P14747	604 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	TRK2	P28584	889 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	SRP101	P32916	621 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	TEF4	P36008	412 aa	Known RBP	5.72	□□□□□ -1.49
LCB2	YDR062W	APN2	P38207	520 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	KHA1	P40309	873 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	RMD8	P43620	662 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	EXG2	P52911	562 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	YGR016W	P53209	190 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	YNR071C	P53757	342 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	MFB1	Q04922	465 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	STP4	Q07351	490 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	TY1A-NL1	Q12391	440 aa	Known RBP	5.72	□□□□□ -1.49
LCB2	YDR062W	RED1	P14291	827 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	RPC53	P25441	422 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	SGF29	P25554	259 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	YBR225W	P38321	900 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	PRM2	P40534	656 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	AXL1	P40851	1208 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	SSY5	P47002	699 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	ORC4	P54791	529 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	FCP1	Q03254	732 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	UTP21	Q06078	939 aa	Predicted RBP	5.72	□□□□□ -1.49
LCB2	YDR062W	SMC6	Q12749	1114 aa		5.72	□□□□□ -1.49
LCB2	YDR062W	SWI4	P25302	1093 aa	Known RBP	5.71	□□□□□ -1.5
LCB2	YDR062W	BYE1	P36106	594 aa		5.71	□□□□□ -1.5
LCB2	YDR062W	RRM3	P38766	723 aa		5.71	□□□□□ -1.5
LCB2	YDR062W	CAJ1	P39101	391 aa		5.71	□□□□□ -1.5
LCB2	YDR062W	ARE2	P53629	642 aa	Known RBP	5.71	□□□□□ -1.5
LCB2	YDR062W	YOR1	P53049	1477 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	HSF1	P10961	833 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	OLE1	P21147	510 aa	Known RBP	5.7	□□□□□ -1.5
LCB2	YDR062W	RIT1	P23796	513 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	CNS1	P33313	385 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	MTH1	P35198	433 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	ABZ1	P37254	787 aa	Predicted RBP	5.7	□□□□□ -1.5
LCB2	YDR062W	LRP1	P38801	184 aa	Known RBP	5.7	□□□□□ -1.5
LCB2	YDR062W	CIR1	P42940	261 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	MTR3	P48240	250 aa	Predicted RBP	5.7	□□□□□ -1.5
LCB2	YDR062W	BSC5	P53755	489 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	YPL071C	Q02864	156 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	AAD4	Q07747	329 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	ZRT2	Q12436	422 aa		5.7	□□□□□ -1.5
LCB2	YDR062W	ADE3	P07245	946 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	FBP1	P09201	348 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	CKA1	P15790	372 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	SAC6	P32599	642 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	FRD1	P32614	470 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	RFC5	P38251	354 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	CDA1	Q06702	301 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	ISA1	Q07821	250 aa	Predicted RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	YVC1	Q12324	675 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	YRF1-1	P0CX20	1796 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	YRF1-5	P0CX21	1796 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	YRF1-8	P0CX22	1796 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	NTE1	Q04958	1679 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-JR2	P47100	1755 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-ER2	Q03619	1755 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-MR1	Q04214	1755 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-MR2	Q04670	1755 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-LR1	Q12088	1755 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-NL1	Q12112	1755 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-GR1	Q12141	1755 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TY1B-BL	Q12490	1755 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	TPM1	P17536	199 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	IME1	P21190	360 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	DBF4	P32325	704 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	PET127	P32606	800 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	YHR033W	P38690	423 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	NPR2	P39923	615 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	ARF3	P40994	183 aa	RIP-Chip data	5.69	□□□□□ -1.5	not detected
LCB2	YDR062W	TAF4	P50105	388 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	PSP1	P50896	841 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	YGR012W	P53206	393 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	PEF1	P53238	335 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	RCR2	Q03446	210 aa	Known RBP	5.69	□□□□□ -1.5
LCB2	YDR062W	HOS1	Q12214	470 aa		5.69	□□□□□ -1.5
LCB2	YDR062W	SFI1	Q12369	946 aa		5.69	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms