RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W YHL008CP38750 627 aa8.22□□□□□ -1.09
ABP1YCR088W TAH11P47112 604 aa8.22□□□□□ -1.09
ABP1YCR088W AIM7Q12156 149 aa8.22□□□□□ -1.09
ABP1YCR088W SLP1Q12232 587 aa8.22□□□□□ -1.09
ABP1YCR088W GPM3Q12326 303 aa8.22□□□□□ -1.09
ABP1YCR088W SPE4Q12455 300 aa8.22□□□□□ -1.09
ABP1YCR088W ZPS1Q12512 249 aa8.22□□□□□ -1.09
ABP1YCR088W RTP1Q12751 981 aa8.22□□□□□ -1.09
ABP1YCR088W EXO70P19658 623 aa8.21□□□□□ -1.1
ABP1YCR088W SNT1P25357 1226 aa8.21□□□□□ -1.1
ABP1YCR088W HXT3P32466 567 aaKnown RBP8.21□□□□□ -1.1
ABP1YCR088W MRP4P32902 394 aa8.21□□□□□ -1.1
ABP1YCR088W TFC3P34111 1160 aa8.21□□□□□ -1.1
ABP1YCR088W PCM1P38628 557 aaKnown RBP8.21□□□□□ -1.1
ABP1YCR088W HMF1P40037 129 aaKnown RBP8.21□□□□□ -1.1
ABP1YCR088W JEM1P40358 645 aa8.21□□□□□ -1.1
ABP1YCR088W SCD6P45978 349 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1 RIP-Chip
ABP1YCR088W HLJ1P48353 224 aa8.21□□□□□ -1.1
ABP1YCR088W UTP8P53276 713 aaKnown RBP8.21□□□□□ -1.1
ABP1YCR088W COS6P53344 381 aa8.21□□□□□ -1.1
ABP1YCR088W ADI1Q03677 179 aa8.21□□□□□ -1.1
ABP1YCR088W YKU80Q04437 629 aa8.21□□□□□ -1.1
ABP1YCR088W MEU1Q07938 337 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
ABP1YCR088W DIA2Q08496 732 aaPredicted RBP8.21□□□□□ -1.1
ABP1YCR088W AVL9Q12500 764 aa8.21□□□□□ -1.1
ABP1YCR088W ENO2P00925 437 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W TIF1P10081 395 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W PDR1P12383 1068 aa8.2□□□□□ -1.1
ABP1YCR088W GAL2P13181 574 aa8.2□□□□□ -1.1
ABP1YCR088W MEF1P25039 761 aa8.2□□□□□ -1.1
ABP1YCR088W PER1P25625 357 aa8.2□□□□□ -1.1
ABP1YCR088W RAD14P28519 371 aa8.2□□□□□ -1.1
ABP1YCR088W HEM3P28789 327 aa8.2□□□□□ -1.1
ABP1YCR088W ZUO1P32527 433 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W SIP2P34164 415 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W APN2P38207 520 aa8.2□□□□□ -1.1
ABP1YCR088W SAH1P39954 449 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W YEL025CP39991 1188 aa8.2□□□□□ -1.1
ABP1YCR088W HOP2P53187 214 aa8.2□□□□□ -1.1
ABP1YCR088W LSC1P53598 329 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W SLD5Q03406 294 aa8.2□□□□□ -1.1
ABP1YCR088W YMR321CQ04898 105 aa8.2□□□□□ -1.1
ABP1YCR088W SEC1P30619 724 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W PYC2P32327 1180 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W OCT1P35999 772 aa8.2□□□□□ -1.1
ABP1YCR088W DBP7P36120 742 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W SWC5P38326 303 aa8.2□□□□□ -1.1
ABP1YCR088W TRM5P38793 499 aa8.2□□□□□ -1.1
ABP1YCR088W SCC4P40090 624 aa8.2□□□□□ -1.1
ABP1YCR088W CHS6P40955 746 aa8.2□□□□□ -1.1
ABP1YCR088W RPS7BP48164 190 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W SHE10P53075 577 aa8.2□□□□□ -1.1
ABP1YCR088W MNP1P53163 194 aaPredicted RBP8.2□□□□□ -1.1
ABP1YCR088W YGL036WP53185 909 aaPredicted RBP8.2□□□□□ -1.1
ABP1YCR088W CDC55Q00362 526 aa8.2□□□□□ -1.1
ABP1YCR088W SXM1Q04175 944 aaKnown RBP8.2□□□□□ -1.1
ABP1YCR088W YRR1Q12172 810 aa8.2□□□□□ -1.1
ABP1YCR088W YLL058WQ12198 575 aa8.2□□□□□ -1.1
ABP1YCR088W NOT5Q12514 560 aaPredicted RBP8.2□□□□□ -1.1
ABP1YCR088W ASP3-2P0CX77 362 aa8.19□□□□□ -1.1
ABP1YCR088W ASP3-3P0CX78 362 aa8.19□□□□□ -1.1
ABP1YCR088W ASP3-4P0CX79 362 aa8.19□□□□□ -1.1
ABP1YCR088W ASP3-1P0CZ17 362 aa8.19□□□□□ -1.1
ABP1YCR088W SNA3P14359 133 aa8.19□□□□□ -1.1
ABP1YCR088W YAK1P14680 807 aa8.19□□□□□ -1.1
ABP1YCR088W GFD2P25370 566 aaKnown RBP8.19□□□□□ -1.1
ABP1YCR088W DGR2P32330 852 aa8.19□□□□□ -1.1
ABP1YCR088W SEC6P32844 805 aa8.19□□□□□ -1.1
ABP1YCR088W AST1P35183 429 aa8.19□□□□□ -1.1
ABP1YCR088W NUP120P35729 1037 aa8.19□□□□□ -1.1
ABP1YCR088W HES1P35843 434 aa8.19□□□□□ -1.1
ABP1YCR088W DPH1P40487 425 aaKnown RBP8.19□□□□□ -1.1
ABP1YCR088W YFL012WP43580 148 aa8.19□□□□□ -1.1
ABP1YCR088W SAD1P43589 448 aa8.19□□□□□ -1.1
ABP1YCR088W MAD3P47074 515 aa8.19□□□□□ -1.1
ABP1YCR088W ACF4P47129 309 aa8.19□□□□□ -1.1
ABP1YCR088W YMR160WQ03823 816 aa8.19□□□□□ -1.1
ABP1YCR088W GAL10P04397 699 aa8.18□□□□□ -1.1
ABP1YCR088W IMA3P0CW40 589 aa8.18□□□□□ -1.1
ABP1YCR088W IMA4P0CW41 589 aa8.18□□□□□ -1.1
ABP1YCR088W YBL036CP38197 257 aa8.18□□□□□ -1.1
ABP1YCR088W SLI15P38283 698 aa8.18□□□□□ -1.1
ABP1YCR088W TSC10P38342 320 aa8.18□□□□□ -1.1
ABP1YCR088W VPS29P38759 282 aa8.18□□□□□ -1.1
ABP1YCR088W PEP8P40335 379 aa8.18□□□□□ -1.1
ABP1YCR088W YIL054WP40524 105 aa8.18□□□□□ -1.1
ABP1YCR088W SQS1P53866 767 aaKnown RBP8.18□□□□□ -1.1
ABP1YCR088W RPM2Q02773 1202 aa8.18□□□□□ -1.1
ABP1YCR088W YDR476CQ03362 224 aa8.18□□□□□ -1.1
ABP1YCR088W MSH6Q03834 1242 aa8.18□□□□□ -1.1
ABP1YCR088W YLR455WQ06188 304 aa8.18□□□□□ -1.1
ABP1YCR088W YSH1Q06224 779 aaPredicted RBP8.18□□□□□ -1.1
ABP1YCR088W MDM38Q08179 573 aa8.18□□□□□ -1.1
ABP1YCR088W IMA2Q08295 589 aa8.18□□□□□ -1.1
ABP1YCR088W YPR202WQ08993 238 aa8.18□□□□□ -1.1
ABP1YCR088W RPS9BP05755 195 aaKnown RBP8.17□□□□□ -1.1
ABP1YCR088W KEX2P13134 814 aa8.17□□□□□ -1.1
ABP1YCR088W VMA2P16140 517 aaKnown RBP8.17□□□□□ -1.1
ABP1YCR088W EFT1P32324 842 aaKnown RBP8.17□□□□□ -1.1
ABP1YCR088W IXR1P33417 597 aa8.17□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 31 ms