RNA–Protein interactions for RNA: YBR274W

CHK1, Transcript of Serine/threonine kinase and DNA damage checkpoint effector, yeast

Gene CHK1, Length 1,584 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CHK1	YBR274W	STB4	P50104	949 aa		4.24	□□□□□ -1.73
CHK1	YBR274W	RRT6	P53117	311 aa	Predicted RBP	4.24	□□□□□ -1.73
CHK1	YBR274W	IRC4	Q03036	179 aa		4.24	□□□□□ -1.73
CHK1	YBR274W	TMA64	Q04600	565 aa	Known RBP	4.24	□□□□□ -1.73
CHK1	YBR274W	ADY4	Q05955	493 aa		4.24	□□□□□ -1.73
CHK1	YBR274W	PSF3	Q12146	194 aa		4.24	□□□□□ -1.73
CHK1	YBR274W	TAD3	Q9URQ3	322 aa		4.24	□□□□□ -1.73
CHK1	YBR274W	MET6	P05694	767 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	CIT2	P08679	460 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	KAR1	P11927	433 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	RAD24	P32641	659 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	STO1	P34160	861 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	MTC2	P34246	357 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	GRX7	P38068	203 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	YBR259W	P38338	688 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	SIC1	P38634	284 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	RPN10	P38886	268 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	NUP82	P40368	713 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	YIR042C	P40586	236 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	BUD6	P41697	788 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	HBT1	Q07653	1046 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	CSR2	Q12734	1121 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	ADR1	P07248	1323 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	CBP1	P07252	654 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	PHO8	P11491	566 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	RPS7A	P26786	190 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	VPS27	P40343	622 aa	Known RBP	4.23	□□□□□ -1.73
CHK1	YBR274W	TY4A-J	P47023	414 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	MDM12	Q92328	271 aa		4.23	□□□□□ -1.73
CHK1	YBR274W	DUR1,2	P32528	1835 aa	Known RBP	4.22	□□□□□ -1.73
CHK1	YBR274W	RPS19A	P07280	144 aa	Known RBP	4.22	□□□□□ -1.73
CHK1	YBR274W	RPS19B	P07281	144 aa	Predicted RBP	4.22	□□□□□ -1.73
CHK1	YBR274W	LAT1	P12695	482 aa	Known RBP	4.22	□□□□□ -1.73
CHK1	YBR274W	PPS1	P38148	807 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	YBR053C	P38235	358 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	YHL017W	P38745	532 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	MNN1	P39106	762 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	YFL052W	P43551	465 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	YJL163C	P46996	555 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	MAL11	P53048	616 aa		4.22	□□□□□ -1.73
CHK1	YBR274W	SNU66	Q12420	587 aa	Predicted RBP	4.22	□□□□□ -1.73
CHK1	YBR274W	TAO3	P40468	2376 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	MCD4	P36051	919 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	APE3	P37302	537 aa	Known RBP	4.21	□□□□□ -1.74
CHK1	YBR274W	DSS1	P39112	969 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	CAF16	P43569	289 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	STU2	P46675	888 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	MUK1	Q02866	612 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	CSI1	Q04368	295 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	ATG11	Q12527	1178 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	GSC2	P40989	1895 aa		4.21	□□□□□ -1.74
CHK1	YBR274W	MRC1	P25588	1096 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	PWP2	P25635	923 aa	Known RBP	4.2	□□□□□ -1.74
CHK1	YBR274W	THI4	P32318	326 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	NOC2	P39744	710 aa	Known RBP	4.2	□□□□□ -1.74
CHK1	YBR274W	YFH7	P43591	353 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	NPY1	P53164	384 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	ORC4	P54791	529 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	SNP1	Q00916	300 aa	Predicted RBP	4.2	□□□□□ -1.74
CHK1	YBR274W	TMN2	Q04562	672 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	GAD1	Q04792	585 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	YDR338C	Q05497	695 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	YDL121C	Q07541	149 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	CDC45	Q08032	650 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	TGL5	Q12043	749 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	GPR1	Q12361	961 aa		4.2	□□□□□ -1.74
CHK1	YBR274W	VBA3	P25594	458 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	ECM1	P39715	212 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	BNA2	P47125	453 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	PRP31	P49704	494 aa	Predicted RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	RBA50	Q04418	439 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	ASM4	Q05166	528 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	VPS13	Q07878	3144 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	CDC9	P04819	755 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	SNF3	P10870	884 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	RPT3	P33298	428 aa	Known RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	HIS7	P33734	552 aa	Known RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	PMC1	P38929	1173 aa	Predicted RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	RPT2	P40327	437 aa	Known RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	ESF2	P53743	316 aa	Known RBP	4.19	□□□□□ -1.74
CHK1	YBR274W	UGO1	Q03327	502 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	GIS1	Q03833	894 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	IRC13	Q08630	104 aa		4.19	□□□□□ -1.74
CHK1	YBR274W	PIF1	P07271	859 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	SEC18	P18759	758 aa	Known RBP	4.18	□□□□□ -1.74
CHK1	YBR274W	MSH2	P25847	964 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	APT2	P36973	181 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	IES1	P43579	692 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	NHX1	Q04121	633 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	IRC10	Q08118	586 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	NKP1	Q12493	238 aa		4.18	□□□□□ -1.74
CHK1	YBR274W	PFK2	P16862	959 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
CHK1	YBR274W	GCD7	P32502	381 aa	Predicted RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	PEX6	P33760	1030 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	MTH1	P35198	433 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	PTK1	P36002	662 aa	Predicted RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	VPS24	P36095	224 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	HSL7	P38274	827 aa		4.17	□□□□□ -1.74
CHK1	YBR274W	KEL1	P38853	1164 aa	Known RBP	4.17	□□□□□ -1.74
CHK1	YBR274W	REV7	P38927	245 aa		4.17	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 13.2 ms