RNA–Protein interactions for RNA: YBR097W

VPS15, Transcript of Serine/threonine protein kinase involved in vacuolar protein sorting, yeastyeast

Gene VPS15, Length 4,365 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS15YBR097W RSM22P36056 628 aa1.72□□□□□ -2.13
VPS15YBR097W TBS1P38114 1094 aa1.72□□□□□ -2.13
VPS15YBR097W ATG14P38270 344 aa1.72□□□□□ -2.13
VPS15YBR097W YSW1P38280 609 aa1.72□□□□□ -2.13
VPS15YBR097W ISC1P40015 477 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W ESL1P40456 1118 aa1.72□□□□□ -2.13
VPS15YBR097W GZF3P42944 551 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W MNN11P46985 422 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W CCT8P47079 568 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W YMR1P47147 688 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
VPS15YBR097W SSN8P47821 323 aa1.72□□□□□ -2.13
VPS15YBR097W KEL2P50090 882 aa1.72□□□□□ -2.13
VPS15YBR097W PIP2P52960 996 aa1.72□□□□□ -2.13
VPS15YBR097W BRE5P53741 515 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W DNM1P54861 757 aa1.72□□□□□ -2.13
VPS15YBR097W TIM11P81449 96 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W HOT1Q03213 719 aa1.72□□□□□ -2.13
VPS15YBR097W TLG1Q03322 224 aa1.72□□□□□ -2.13
VPS15YBR097W PPM1Q04081 328 aa1.72□□□□□ -2.13
VPS15YBR097W BUD22Q04347 519 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W FAL1Q12099 399 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W NSL1Q12143 216 aa1.72□□□□□ -2.13
VPS15YBR097W PSF3Q12146 194 aa1.72□□□□□ -2.13
VPS15YBR097W MDM32Q12171 622 aa1.72□□□□□ -2.13
VPS15YBR097W ARP7Q12406 477 aa1.72□□□□□ -2.13
VPS15YBR097W ERP4Q12450 207 aa1.72□□□□□ -2.13
VPS15YBR097W RPL24AP04449 155 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W RPL25P04456 142 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W RAD7P06779 565 aa1.72□□□□□ -2.13
VPS15YBR097W ERG20P08524 352 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W NFT1P0CE68 1218 aa1.72□□□□□ -2.13
VPS15YBR097W RPL19AP0CX82 189 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W RPL19BP0CX83 189 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W PDR1P12383 1068 aa1.72□□□□□ -2.13
VPS15YBR097W NMT1P14743 455 aa1.72□□□□□ -2.13
VPS15YBR097W FRS1P15624 595 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W VPS1P21576 704 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W MSM1P22438 575 aa1.72□□□□□ -2.13
VPS15YBR097W PEX1P24004 1043 aa1.72□□□□□ -2.13
VPS15YBR097W PTP2P29461 750 aa1.72□□□□□ -2.13
VPS15YBR097W FUN26P31381 517 aa1.72□□□□□ -2.13
VPS15YBR097W MAL32P38158 584 aa1.72□□□□□ -2.13
VPS15YBR097W SRP68P38687 599 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W YHL050CP38721 697 aa1.72□□□□□ -2.13
VPS15YBR097W ORC6P38826 435 aa1.72□□□□□ -2.13
VPS15YBR097W OAF1P39720 1047 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W EXO1P39875 702 aa1.72□□□□□ -2.13
VPS15YBR097W ATG32P40458 529 aa1.72□□□□□ -2.13
VPS15YBR097W VMA13P41807 478 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W FMP32P43557 207 aa1.72□□□□□ -2.13
VPS15YBR097W NPA3P47122 385 aa1.72□□□□□ -2.13
VPS15YBR097W YGL108CP53139 140 aa1.72□□□□□ -2.13
VPS15YBR097W MAL12P53341 584 aa1.72□□□□□ -2.13
VPS15YBR097W SSU72P53538 206 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W RPT4P53549 437 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W SNF12P53628 566 aa1.72□□□□□ -2.13
VPS15YBR097W YNR063WP53749 607 aa1.72□□□□□ -2.13
VPS15YBR097W RTC4P53850 401 aa1.72□□□□□ -2.13
VPS15YBR097W RPL34AP87262 121 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W SKI8Q02793 397 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W HMO1Q03973 246 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W TRS120Q04183 1289 aa1.72□□□□□ -2.13
VPS15YBR097W RAD33Q04231 177 aa1.72□□□□□ -2.13
VPS15YBR097W TRM12Q04235 462 aa1.72□□□□□ -2.13
VPS15YBR097W YDR514CQ04408 483 aa1.72□□□□□ -2.13
VPS15YBR097W ROY1Q04847 553 aa1.72□□□□□ -2.13
VPS15YBR097W BUR2Q05949 395 aa1.72□□□□□ -2.13
VPS15YBR097W CSR1Q06705 408 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W ENV9Q08651 330 aa1.72□□□□□ -2.13
VPS15YBR097W RTT10Q08924 1013 aa1.72□□□□□ -2.13
VPS15YBR097W YTM1Q12024 460 aaPredicted RBP1.72□□□□□ -2.13
VPS15YBR097W VAM3Q12241 283 aa1.72□□□□□ -2.13
VPS15YBR097W STB3Q12427 513 aa1.72□□□□□ -2.13
VPS15YBR097W YGR161W-CQ3E744 92 aa1.72□□□□□ -2.13
VPS15YBR097W NUP159P40477 1460 aa1.72□□□□□ -2.13
VPS15YBR097W SNQ2P32568 1501 aaKnown RBP1.72□□□□□ -2.13
VPS15YBR097W TRL1P09880 827 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W NSP1P14907 823 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W SRP54P20424 541 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W RNR1P21524 888 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W CPR2P23285 205 aa1.71□□□□□ -2.14
VPS15YBR097W RAD27P26793 382 aa1.71□□□□□ -2.14
VPS15YBR097W ANR2P36090 516 aaPredicted RBP1.71□□□□□ -2.14
VPS15YBR097W HEL1P36113 551 aa1.71□□□□□ -2.14
VPS15YBR097W BZZ1P38822 633 aa1.71□□□□□ -2.14
VPS15YBR097W MBP1P39678 833 aa1.71□□□□□ -2.14
VPS15YBR097W VAC8P39968 578 aa1.71□□□□□ -2.14
VPS15YBR097W NTA1P40354 457 aa1.71□□□□□ -2.14
VPS15YBR097W CCT5P40413 562 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W FIG4P42837 879 aa1.71□□□□□ -2.14
VPS15YBR097W RMD8P43620 662 aa1.71□□□□□ -2.14
VPS15YBR097W MET12P46151 657 aa1.71□□□□□ -2.14
VPS15YBR097W YJR030CP47101 745 aa1.71□□□□□ -2.14
VPS15YBR097W HAM1P47119 197 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W RPA14P50106 137 aa1.71□□□□□ -2.14
VPS15YBR097W MNN10P50108 393 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W LIF1P53150 421 aa1.71□□□□□ -2.14
VPS15YBR097W PEF1P53238 335 aa1.71□□□□□ -2.14
VPS15YBR097W DBP6P53734 629 aaKnown RBP1.71□□□□□ -2.14
VPS15YBR097W ELA1P53861 379 aaPredicted RBP1.71□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms